RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 TCP10L2B9ZVM9 353 aa24.32■■□□□ 1.48
CDC42SE2-206ENST00000503291 USP17L12C9JPN9 530 aa24.32■■□□□ 1.48
CDC42SE2-206ENST00000503291 USP17L21D6R901 530 aa24.32■■□□□ 1.48
CDC42SE2-206ENST00000503291 HSPA4P34932 840 aa24.32■■□□□ 1.48
CDC42SE2-206ENST00000503291 TCP10Q12799 353 aa24.32■■□□□ 1.48
CDC42SE2-206ENST00000503291 SCN4AP35499 1836 aa24.32■■□□□ 1.48
CDC42SE2-206ENST00000503291 ZMYM6O95789 1325 aa24.32■■□□□ 1.48
CDC42SE2-206ENST00000503291 BAZ2AQ9UIF9 1905 aaKnown RBP24.32■■□□□ 1.48
CDC42SE2-206ENST00000503291 NPM3O75607 178 aaKnown RBP24.32■■□□□ 1.48
CDC42SE2-206ENST00000503291 FKBP1CQ5VVH2 108 aa24.32■■□□□ 1.48
CDC42SE2-206ENST00000503291 CTR9Q6PD62 1173 aa24.32■■□□□ 1.48
CDC42SE2-206ENST00000503291 ZFPM1Q8IX07 1006 aa24.32■■□□□ 1.48
CDC42SE2-206ENST00000503291 C22orf23Q9BZE7 217 aa24.32■■□□□ 1.48
CDC42SE2-206ENST00000503291 TAF1DQ9H5J8 278 aaPredicted RBP24.32■■□□□ 1.48
CDC42SE2-206ENST00000503291 SAP30BPQ9UHR5 308 aaKnown RBP24.32■■□□□ 1.48
CDC42SE2-206ENST00000503291 USP50Q70EL3 339 aaPredicted RBP24.31■■□□□ 1.48
CDC42SE2-206ENST00000503291 OSBPL5Q9H0X9 879 aaPredicted RBP24.31■■□□□ 1.48
CDC42SE2-206ENST00000503291 FOCADQ5VW36 1801 aa24.31■■□□□ 1.48
CDC42SE2-206ENST00000503291 CREB3L3Q68CJ9 461 aa24.3■■□□□ 1.48
CDC42SE2-206ENST00000503291 RRAGCQ9HB90 399 aa24.3■■□□□ 1.48
CDC42SE2-206ENST00000503291 PALD1Q9ULE6 856 aa24.3■■□□□ 1.48
CDC42SE2-206ENST00000503291 MINDY4BA8MYZ0 360 aa24.3■■□□□ 1.48
CDC42SE2-206ENST00000503291 ENTPD3O75355 529 aa24.3■■□□□ 1.48
CDC42SE2-206ENST00000503291 CYP21A2P08686 494 aa24.3■■□□□ 1.48
CDC42SE2-206ENST00000503291 MCCP23508 829 aa24.3■■□□□ 1.48
CDC42SE2-206ENST00000503291 ANGEL2Q5VTE6 544 aaKnown RBP24.3■■□□□ 1.48
CDC42SE2-206ENST00000503291 ZNF213O14771 459 aa24.29■■□□□ 1.48
CDC42SE2-206ENST00000503291 SLC27A2O14975 620 aa24.29■■□□□ 1.48
CDC42SE2-206ENST00000503291 HAND2P61296 217 aa24.29■■□□□ 1.48
CDC42SE2-206ENST00000503291 IMMTQ16891 758 aaKnown RBP24.29■■□□□ 1.48
CDC42SE2-206ENST00000503291 SBK1Q52WX2 424 aa24.29■■□□□ 1.48
CDC42SE2-206ENST00000503291 ARPP21Q9UBL0 812 aaPredicted RBP24.29■■□□□ 1.48
CDC42SE2-206ENST00000503291 SCAF8Q9UPN6 1271 aaKnown RBP24.29■■□□□ 1.48
CDC42SE2-206ENST00000503291 CYP2D7A0A087X1C5 515 aa24.28■■□□□ 1.48
CDC42SE2-206ENST00000503291 VEGFAP15692 232 aaPredicted RBP24.28■■□□□ 1.48
CDC42SE2-206ENST00000503291 SLC4A8Q2Y0W8 1093 aa24.28■■□□□ 1.48
CDC42SE2-206ENST00000503291 ZNF526Q8TF50 670 aaPredicted RBP24.28■■□□□ 1.48
CDC42SE2-206ENST00000503291 POLR3DP05423 398 aaPredicted RBP24.28■■□□□ 1.48
CDC42SE2-206ENST00000503291 CYP2D6P10635 497 aa24.28■■□□□ 1.48
CDC42SE2-206ENST00000503291 RNF20Q5VTR2 975 aa24.28■■□□□ 1.48
CDC42SE2-206ENST00000503291 FAM83AQ86UY5 434 aa24.28■■□□□ 1.48
CDC42SE2-206ENST00000503291 GGA3Q9NZ52 723 aa24.28■■□□□ 1.48
CDC42SE2-206ENST00000503291 PLCD1P51178 756 aa24.27■■□□□ 1.48
CDC42SE2-206ENST00000503291 C12orf60Q5U649 245 aa24.27■■□□□ 1.48
CDC42SE2-206ENST00000503291 PNMA8AQ86V59 439 aaPredicted RBP24.27■■□□□ 1.48
CDC42SE2-206ENST00000503291 AMOTL1Q8IY63 956 aa24.27■■□□□ 1.48
CDC42SE2-206ENST00000503291 RASEFQ8IZ41 740 aa24.27■■□□□ 1.48
CDC42SE2-206ENST00000503291 FAM151AQ8WW52 585 aa24.27■■□□□ 1.48
CDC42SE2-206ENST00000503291 TBC1D32Q96NH3 1257 aa24.27■■□□□ 1.48
CDC42SE2-206ENST00000503291 NAV1Q8NEY1 1877 aa24.27■■□□□ 1.48
CDC42SE2-206ENST00000503291 CNTNAP1P78357 1384 aa24.27■■□□□ 1.48
CDC42SE2-206ENST00000503291 SMIM22K7EJ46 135 aa24.27■■□□□ 1.48
CDC42SE2-206ENST00000503291 RBM25P49756 843 aaKnown RBP24.27■■□□□ 1.48
CDC42SE2-206ENST00000503291 EVX2Q03828 476 aa24.27■■□□□ 1.48
CDC42SE2-206ENST00000503291 PPARAQ07869 468 aa24.27■■□□□ 1.48
CDC42SE2-206ENST00000503291 TNFAIP1Q13829 316 aa24.27■■□□□ 1.48
CDC42SE2-206ENST00000503291 EAPPQ56P03 285 aaPredicted RBP24.27■■□□□ 1.48
CDC42SE2-206ENST00000503291 KCNB2Q92953 911 aa24.27■■□□□ 1.48
CDC42SE2-206ENST00000503291 TAF6LQ9Y6J9 622 aa24.27■■□□□ 1.48
CDC42SE2-206ENST00000503291 MYH1P12882 1939 aa24.26■■□□□ 1.47
CDC42SE2-206ENST00000503291 TNNI2P48788 182 aa24.26■■□□□ 1.47
CDC42SE2-206ENST00000503291 SH3BP5LQ7L8J4 393 aa24.26■■□□□ 1.47
CDC42SE2-206ENST00000503291 ZSCAN29Q8IWY8 852 aaPredicted RBP24.26■■□□□ 1.47
CDC42SE2-206ENST00000503291 DDTLA6NHG4 134 aaPredicted RBP24.25■■□□□ 1.47
CDC42SE2-206ENST00000503291 ZKSCAN1P17029 563 aaPredicted RBP24.25■■□□□ 1.47
CDC42SE2-206ENST00000503291 RASA3Q14644 834 aa24.25■■□□□ 1.47
CDC42SE2-206ENST00000503291 DHX36Q9H2U1 1008 aaKnown RBP24.25■■□□□ 1.47
CDC42SE2-206ENST00000503291 NMRK2Q9NPI5 230 aa24.25■■□□□ 1.47
CDC42SE2-206ENST00000503291 CTDSPL2Q05D32 466 aa24.25■■□□□ 1.47
CDC42SE2-206ENST00000503291 TTC6Q86TZ1 520 aa24.25■■□□□ 1.47
CDC42SE2-206ENST00000503291 APOBEC3FQ8IUX4 373 aaKnown RBP24.25■■□□□ 1.47
CDC42SE2-206ENST00000503291 ZC3H15Q8WU90 426 aaKnown RBP24.25■■□□□ 1.47
CDC42SE2-206ENST00000503291 TMEM39BQ9GZU3 492 aa24.25■■□□□ 1.47
CDC42SE2-206ENST00000503291 NBPF3Q9H094 633 aa24.25■■□□□ 1.47
CDC42SE2-206ENST00000503291 DEFB129Q9H1M3 183 aa24.25■■□□□ 1.47
CDC42SE2-206ENST00000503291 ANAPC4Q9UJX5 808 aa24.25■■□□□ 1.47
CDC42SE2-206ENST00000503291 SNX14Q9Y5W7 946 aa24.25■■□□□ 1.47
CDC42SE2-206ENST00000503291 DDX60LQ5H9U9 1706 aaKnown RBP24.24■■□□□ 1.47
CDC42SE2-206ENST00000503291 STK11IPQ8N1F8 1099 aa24.24■■□□□ 1.47
CDC42SE2-206ENST00000503291 PITPNM2Q9BZ72 1349 aa24.23■■□□□ 1.47
CDC42SE2-206ENST00000503291 TSGA10IPQ3SY00 556 aa24.23■■□□□ 1.47
CDC42SE2-206ENST00000503291 DCPSQ96C86 337 aaKnown RBP24.23■■□□□ 1.47
CDC42SE2-206ENST00000503291 ATRNL1Q5VV63 1379 aa24.23■■□□□ 1.47
CDC42SE2-206ENST00000503291 PGAP2Q9UHJ9 254 aa24.23■■□□□ 1.47
CDC42SE2-206ENST00000503291 HLA-DOAP06340 250 aa24.22■■□□□ 1.47
CDC42SE2-206ENST00000503291 ANAPC15P60006 121 aa24.22■■□□□ 1.47
CDC42SE2-206ENST00000503291 TBC1D10CQ8IV04 446 aa24.22■■□□□ 1.47
CDC42SE2-206ENST00000503291 PI4KBQ9UBF8 816 aa24.22■■□□□ 1.47
CDC42SE2-206ENST00000503291 POLR2AP24928 1970 aaKnown RBP24.22■■□□□ 1.47
CDC42SE2-206ENST00000503291 INCENPQ9NQS7 918 aa24.22■■□□□ 1.47
CDC42SE2-206ENST00000503291 COL2A1P02458 1487 aaPredicted RBP24.21■■□□□ 1.47
CDC42SE2-206ENST00000503291 E7EWF7 191 aa24.21■■□□□ 1.47
CDC42SE2-206ENST00000503291 STOX1Q6ZVD7 989 aa24.21■■□□□ 1.47
CDC42SE2-206ENST00000503291 CDAN1Q8IWY9 1227 aa24.21■■□□□ 1.47
CDC42SE2-206ENST00000503291 DYNLL2Q96FJ2 89 aa24.21■■□□□ 1.47
CDC42SE2-206ENST00000503291 CSRNP1Q96S65 589 aa24.21■■□□□ 1.47
CDC42SE2-206ENST00000503291 SLC3A2P08195 630 aaKnown RBP24.2■■□□□ 1.47
CDC42SE2-206ENST00000503291 POTEIP0CG38 1075 aa24.2■■□□□ 1.47
CDC42SE2-206ENST00000503291 POTEJP0CG39 1038 aa24.2■■□□□ 1.47
CDC42SE2-206ENST00000503291 ADCK5Q3MIX3 580 aa24.2■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms