RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 DOCK2Q92608 1830 aa19.65■□□□□ 0.74
HDAC6-236ENST00000498808 PHF20L1A8MW92 1017 aa19.64■□□□□ 0.73
HDAC6-236ENST00000498808 BMP8BP34820 402 aa19.64■□□□□ 0.73
HDAC6-236ENST00000498808 FASTKD5Q7L8L6 764 aaKnown RBP19.64■□□□□ 0.73
HDAC6-236ENST00000498808 IFIT1P09914 478 aaKnown RBP19.63■□□□□ 0.73
HDAC6-236ENST00000498808 PTPRAP18433 802 aa19.63■□□□□ 0.73
HDAC6-236ENST00000498808 PRDX5P30044 214 aa19.63■□□□□ 0.73
HDAC6-236ENST00000498808 PUM3Q15397 648 aaKnown RBP19.63■□□□□ 0.73
HDAC6-236ENST00000498808 GPR153Q6NV75 609 aa19.63■□□□□ 0.73
HDAC6-236ENST00000498808 GADL1Q6ZQY3 521 aa19.63■□□□□ 0.73
HDAC6-236ENST00000498808 Q7L0L9 218 aa19.63■□□□□ 0.73
HDAC6-236ENST00000498808 NECAB2Q7Z6G3 386 aa19.63■□□□□ 0.73
HDAC6-236ENST00000498808 SCYL3Q8IZE3 742 aa19.63■□□□□ 0.73
HDAC6-236ENST00000498808 DEFB123Q8N688 67 aa19.63■□□□□ 0.73
HDAC6-236ENST00000498808 WDR66Q8TBY9 1149 aa19.63■□□□□ 0.73
HDAC6-236ENST00000498808 ZMYND8Q9ULU4 1186 aaPredicted RBP19.63■□□□□ 0.73
HDAC6-236ENST00000498808 SLC45A1Q9Y2W3 748 aa19.63■□□□□ 0.73
HDAC6-236ENST00000498808 AFG3L2Q9Y4W6 797 aa19.63■□□□□ 0.73
HDAC6-236ENST00000498808 PHIPQ8WWQ0 1821 aa19.62■□□□□ 0.73
HDAC6-236ENST00000498808 WDR63Q8IWG1 891 aa19.62■□□□□ 0.73
HDAC6-236ENST00000498808 C7orf61Q8IZ16 206 aa19.62■□□□□ 0.73
HDAC6-236ENST00000498808 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.62■□□□□ 0.73
HDAC6-236ENST00000498808 SPINK5Q9NQ38 1064 aaPredicted RBP19.62■□□□□ 0.73
HDAC6-236ENST00000498808 TAOK2Q9UL54 1235 aa19.62■□□□□ 0.73
HDAC6-236ENST00000498808 SMCR8Q8TEV9 937 aaPredicted RBP19.61■□□□□ 0.73
HDAC6-236ENST00000498808 PICK1Q9NRD5 415 aa19.61■□□□□ 0.73
HDAC6-236ENST00000498808 USP40Q9NVE5 1235 aa19.61■□□□□ 0.73
HDAC6-236ENST00000498808 SALL2Q9Y467 1007 aaPredicted RBP19.61■□□□□ 0.73
HDAC6-236ENST00000498808 DOCK1Q14185 1865 aa19.6■□□□□ 0.73
HDAC6-236ENST00000498808 SLURP2P0DP57 97 aa19.6■□□□□ 0.73
HDAC6-236ENST00000498808 STXBP5LQ9Y2K9 1186 aa19.6■□□□□ 0.73
HDAC6-236ENST00000498808 ZEB1P37275 1124 aaPredicted RBP19.59■□□□□ 0.73
HDAC6-236ENST00000498808 LRIT3Q3SXY7 679 aa19.59■□□□□ 0.73
HDAC6-236ENST00000498808 SH3BP5LQ7L8J4 393 aa19.59■□□□□ 0.73
HDAC6-236ENST00000498808 ANKRD13CQ8N6S4 541 aa19.59■□□□□ 0.73
HDAC6-236ENST00000498808 COA7Q96BR5 231 aa19.59■□□□□ 0.73
HDAC6-236ENST00000498808 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.59■□□□□ 0.73
HDAC6-236ENST00000498808 RFX7Q2KHR2 1363 aa19.58■□□□□ 0.73
HDAC6-236ENST00000498808 SLC5A1P13866 664 aa19.58■□□□□ 0.72
HDAC6-236ENST00000498808 SYN1P17600 705 aa19.58■□□□□ 0.72
HDAC6-236ENST00000498808 RGS3P49796 1198 aa19.58■□□□□ 0.72
HDAC6-236ENST00000498808 ANKLE1Q8NAG6 615 aa19.58■□□□□ 0.72
HDAC6-236ENST00000498808 LPIN2Q92539 896 aa19.58■□□□□ 0.72
HDAC6-236ENST00000498808 MTMR10Q9NXD2 777 aa19.58■□□□□ 0.72
HDAC6-236ENST00000498808 DDX60LQ5H9U9 1706 aaKnown RBP19.58■□□□□ 0.72
HDAC6-236ENST00000498808 TRIM75PA6NK02 468 aa19.57■□□□□ 0.72
HDAC6-236ENST00000498808 MAGEA10P43363 369 aaPredicted RBP19.57■□□□□ 0.72
HDAC6-236ENST00000498808 MAP3K10Q02779 954 aa19.57■□□□□ 0.72
HDAC6-236ENST00000498808 CCDC84Q86UT8 332 aaPredicted RBP19.57■□□□□ 0.72
HDAC6-236ENST00000498808 IDI2Q9BXS1 227 aa19.57■□□□□ 0.72
HDAC6-236ENST00000498808 AGTPBP1Q9UPW5 1226 aa19.57■□□□□ 0.72
HDAC6-236ENST00000498808 EYA2O00167 538 aa19.56■□□□□ 0.72
HDAC6-236ENST00000498808 ENTPD3O75355 529 aa19.56■□□□□ 0.72
HDAC6-236ENST00000498808 LDHBP07195 334 aaKnown RBP19.56■□□□□ 0.72
HDAC6-236ENST00000498808 RFX5P48382 616 aaPredicted RBP19.56■□□□□ 0.72
HDAC6-236ENST00000498808 TRIM32Q13049 653 aa19.56■□□□□ 0.72
HDAC6-236ENST00000498808 FAM110CQ1W6H9 321 aa19.56■□□□□ 0.72
HDAC6-236ENST00000498808 TREML2Q5T2D2 321 aa19.56■□□□□ 0.72
HDAC6-236ENST00000498808 TDHQ8IZJ6 230 aa19.56■□□□□ 0.72
HDAC6-236ENST00000498808 UNC80Q8N2C7 3258 aa19.56■□□□□ 0.72
HDAC6-236ENST00000498808 MYH2Q9UKX2 1941 aa19.56■□□□□ 0.72
HDAC6-236ENST00000498808 DDTLA6NHG4 134 aaPredicted RBP19.55■□□□□ 0.72
HDAC6-236ENST00000498808 HMGCRP04035 888 aa19.55■□□□□ 0.72
HDAC6-236ENST00000498808 NBPF3Q9H094 633 aa19.55■□□□□ 0.72
HDAC6-236ENST00000498808 LRRFIP2Q9Y608 721 aaKnown RBP19.55■□□□□ 0.72
HDAC6-236ENST00000498808 SALL1Q9NSC2 1324 aa19.54■□□□□ 0.72
HDAC6-236ENST00000498808 CTNND1O60716 968 aaKnown RBP19.54■□□□□ 0.72
HDAC6-236ENST00000498808 COL25A1Q9BXS0 654 aaPredicted RBP19.54■□□□□ 0.72
HDAC6-236ENST00000498808 DDX4Q9NQI0 724 aaKnown RBP19.54■□□□□ 0.72
HDAC6-236ENST00000498808 GJD2Q9UKL4 321 aa19.54■□□□□ 0.72
HDAC6-236ENST00000498808 GAKO14976 1311 aa19.53■□□□□ 0.72
HDAC6-236ENST00000498808 RPTORQ8N122 1335 aa19.53■□□□□ 0.72
HDAC6-236ENST00000498808 PLXNB2O15031 1838 aa19.53■□□□□ 0.72
HDAC6-236ENST00000498808 LOC285556D6RIA3 1793 aa19.53■□□□□ 0.72
HDAC6-236ENST00000498808 ATG9AQ7Z3C6 839 aa19.53■□□□□ 0.72
HDAC6-236ENST00000498808 ZSCAN29Q8IWY8 852 aaPredicted RBP19.53■□□□□ 0.72
HDAC6-236ENST00000498808 C11orf49Q9H6J7 331 aa19.53■□□□□ 0.72
HDAC6-236ENST00000498808 HMX1Q9NP08 348 aaPredicted RBP19.53■□□□□ 0.72
HDAC6-236ENST00000498808 USP44Q9H0E7 712 aa19.52■□□□□ 0.72
HDAC6-236ENST00000498808 PNMA3Q9UL41 463 aa19.52■□□□□ 0.72
HDAC6-236ENST00000498808 OGDHLQ9ULD0 1010 aa19.52■□□□□ 0.72
HDAC6-236ENST00000498808 PFASO15067 1338 aa19.51■□□□□ 0.71
HDAC6-236ENST00000498808 PHKA1P46020 1223 aa19.51■□□□□ 0.71
HDAC6-236ENST00000498808 PROCA1Q8NCQ7 364 aaPredicted RBP19.51■□□□□ 0.71
HDAC6-236ENST00000498808 UBE2OQ9C0C9 1292 aaKnown RBP19.51■□□□□ 0.71
HDAC6-236ENST00000498808 ATP2B3Q16720 1220 aa19.5■□□□□ 0.71
HDAC6-236ENST00000498808 TRIB2Q92519 343 aa19.5■□□□□ 0.71
HDAC6-236ENST00000498808 GNL3LQ9NVN8 582 aaKnown RBP19.5■□□□□ 0.71
HDAC6-236ENST00000498808 DENND2AQ9ULE3 1009 aa19.5■□□□□ 0.71
HDAC6-236ENST00000498808 FAM196BA6NMK8 535 aa19.49■□□□□ 0.71
HDAC6-236ENST00000498808 GCLCP48506 637 aaPredicted RBP19.49■□□□□ 0.71
HDAC6-236ENST00000498808 PICALMQ13492 652 aa19.49■□□□□ 0.71
HDAC6-236ENST00000498808 SEMA3EO15041 775 aa19.48■□□□□ 0.71
HDAC6-236ENST00000498808 SPP2Q13103 211 aa19.48■□□□□ 0.71
HDAC6-236ENST00000498808 MAP3K21Q5TCX8 1036 aa19.48■□□□□ 0.71
HDAC6-236ENST00000498808 MRPL50Q8N5N7 158 aaKnown RBP19.48■□□□□ 0.71
HDAC6-236ENST00000498808 ATAD5Q96QE3 1844 aa19.47■□□□□ 0.71
HDAC6-236ENST00000498808 TBC1D12O60347 775 aa19.47■□□□□ 0.71
HDAC6-236ENST00000498808 BTDP43251 543 aa19.47■□□□□ 0.71
HDAC6-236ENST00000498808 HMGCS2P54868 508 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms