RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 SLC4A8Q2Y0W8 1093 aa16.24■□□□□ 0.19
CPNE1-227ENST00000498056 C8orf34Q49A92 452 aa16.24■□□□□ 0.19
CPNE1-227ENST00000498056 EPB41L4AQ9HCS5 686 aaPredicted RBP16.24■□□□□ 0.19
CPNE1-227ENST00000498056 DDX4Q9NQI0 724 aaKnown RBP16.24■□□□□ 0.19
CPNE1-227ENST00000498056 SAP30BPQ9UHR5 308 aaKnown RBP16.24■□□□□ 0.19
CPNE1-227ENST00000498056 PAPPA2Q9BXP8 1791 aa16.23■□□□□ 0.19
CPNE1-227ENST00000498056 PITPNM2Q9BZ72 1349 aa16.23■□□□□ 0.19
CPNE1-227ENST00000498056 TNNI2P48788 182 aa16.23■□□□□ 0.19
CPNE1-227ENST00000498056 KIAA1211Q6ZU35 1233 aa16.23■□□□□ 0.19
CPNE1-227ENST00000498056 DCPSQ96C86 337 aaKnown RBP16.23■□□□□ 0.19
CPNE1-227ENST00000498056 NACAP1Q9BZK3 213 aa16.23■□□□□ 0.19
CPNE1-227ENST00000498056 NAPBQ9H115 298 aa16.23■□□□□ 0.19
CPNE1-227ENST00000498056 CNTNAP1P78357 1384 aa16.23■□□□□ 0.19
CPNE1-227ENST00000498056 RPAP1Q9BWH6 1393 aaPredicted RBP16.23■□□□□ 0.19
CPNE1-227ENST00000498056 HSPD1P10809 573 aaKnown RBP16.22■□□□□ 0.19
CPNE1-227ENST00000498056 ZSCAN29Q8IWY8 852 aaPredicted RBP16.22■□□□□ 0.19
CPNE1-227ENST00000498056 IDI2Q9BXS1 227 aa16.22■□□□□ 0.19
CPNE1-227ENST00000498056 OSBPL5Q9H0X9 879 aaPredicted RBP16.22■□□□□ 0.19
CPNE1-227ENST00000498056 MCM9Q9NXL9 1143 aa16.22■□□□□ 0.19
CPNE1-227ENST00000498056 FAM198AQ9UFP1 575 aa16.22■□□□□ 0.19
CPNE1-227ENST00000498056 GSG1L2A8MUP6 293 aa16.21■□□□□ 0.19
CPNE1-227ENST00000498056 ADM5C9JUS6 153 aa16.21■□□□□ 0.19
CPNE1-227ENST00000498056 FOXP2O15409 715 aa16.21■□□□□ 0.19
CPNE1-227ENST00000498056 REC8O95072 547 aa16.21■□□□□ 0.19
CPNE1-227ENST00000498056 LDHDQ86WU2 507 aa16.21■□□□□ 0.19
CPNE1-227ENST00000498056 SULF1Q8IWU6 871 aa16.21■□□□□ 0.19
CPNE1-227ENST00000498056 AMOTL1Q8IY63 956 aa16.21■□□□□ 0.19
CPNE1-227ENST00000498056 TMEM39BQ9GZU3 492 aa16.21■□□□□ 0.19
CPNE1-227ENST00000498056 DCP1AQ9NPI6 582 aaPredicted RBP16.21■□□□□ 0.19
CPNE1-227ENST00000498056 ATP8A2Q9NTI2 1148 aa16.21■□□□□ 0.19
CPNE1-227ENST00000498056 ARPP21Q9UBL0 812 aaPredicted RBP16.21■□□□□ 0.19
CPNE1-227ENST00000498056 PATL2C9JE40 543 aaKnown RBP16.2■□□□□ 0.18
CPNE1-227ENST00000498056 ENTPD3O75355 529 aa16.2■□□□□ 0.18
CPNE1-227ENST00000498056 PTH1RQ03431 593 aa16.2■□□□□ 0.18
CPNE1-227ENST00000498056 RASA3Q14644 834 aa16.2■□□□□ 0.18
CPNE1-227ENST00000498056 FKBP1CQ5VVH2 108 aa16.2■□□□□ 0.18
CPNE1-227ENST00000498056 MAP1SQ66K74 1059 aaPredicted RBP16.2■□□□□ 0.18
CPNE1-227ENST00000498056 KRT26Q7Z3Y9 468 aa16.2■□□□□ 0.18
CPNE1-227ENST00000498056 IFNL3Q8IZI9 196 aa16.2■□□□□ 0.18
CPNE1-227ENST00000498056 ZC3H15Q8WU90 426 aaKnown RBP16.2■□□□□ 0.18
CPNE1-227ENST00000498056 DSCC1Q9BVC3 393 aa16.2■□□□□ 0.18
CPNE1-227ENST00000498056 ZMYM6O95789 1325 aa16.19■□□□□ 0.18
CPNE1-227ENST00000498056 MYH4Q9Y623 1939 aa16.19■□□□□ 0.18
CPNE1-227ENST00000498056 SSC5DA1L4H1 1573 aa16.19■□□□□ 0.18
CPNE1-227ENST00000498056 ATRNL1Q5VV63 1379 aa16.19■□□□□ 0.18
CPNE1-227ENST00000498056 POLR3DP05423 398 aaPredicted RBP16.19■□□□□ 0.18
CPNE1-227ENST00000498056 FAM83AQ86UY5 434 aa16.19■□□□□ 0.18
CPNE1-227ENST00000498056 ZNF784Q8NCA9 323 aaPredicted RBP16.19■□□□□ 0.18
CPNE1-227ENST00000498056 FAM151AQ8WW52 585 aa16.19■□□□□ 0.18
CPNE1-227ENST00000498056 GLIS2Q9BZE0 524 aaPredicted RBP16.19■□□□□ 0.18
CPNE1-227ENST00000498056 LSG1Q9H089 658 aaKnown RBP16.19■□□□□ 0.18
CPNE1-227ENST00000498056 DEFB129Q9H1M3 183 aa16.19■□□□□ 0.18
CPNE1-227ENST00000498056 PALD1Q9ULE6 856 aa16.19■□□□□ 0.18
CPNE1-227ENST00000498056 GREB1LQ9C091 1923 aaPredicted RBP16.18■□□□□ 0.18
CPNE1-227ENST00000498056 KIF3CO14782 793 aa16.18■□□□□ 0.18
CPNE1-227ENST00000498056 HLA-DOAP06340 250 aa16.18■□□□□ 0.18
CPNE1-227ENST00000498056 CYP2D6P10635 497 aa16.18■□□□□ 0.18
CPNE1-227ENST00000498056 CDAN1Q8IWY9 1227 aa16.18■□□□□ 0.18
CPNE1-227ENST00000498056 ZFPM1Q8IX07 1006 aa16.18■□□□□ 0.18
CPNE1-227ENST00000498056 CSRNP1Q96S65 589 aa16.18■□□□□ 0.18
CPNE1-227ENST00000498056 PPP2R3BQ9Y5P8 575 aa16.18■□□□□ 0.18
CPNE1-227ENST00000498056 RBM8AQ9Y5S9 174 aaKnown RBP16.18■□□□□ 0.18
CPNE1-227ENST00000498056 ROBO3Q96MS0 1386 aa16.17■□□□□ 0.18
CPNE1-227ENST00000498056 CYP2D7A0A087X1C5 515 aa16.17■□□□□ 0.18
CPNE1-227ENST00000498056 DDTLA6NHG4 134 aaPredicted RBP16.17■□□□□ 0.18
CPNE1-227ENST00000498056 MINDY4BA8MYZ0 360 aa16.17■□□□□ 0.18
CPNE1-227ENST00000498056 USP17L12C9JPN9 530 aa16.17■□□□□ 0.18
CPNE1-227ENST00000498056 USP17L21D6R901 530 aa16.17■□□□□ 0.18
CPNE1-227ENST00000498056 NPM3O75607 178 aaKnown RBP16.17■□□□□ 0.18
CPNE1-227ENST00000498056 HAND2P61296 217 aa16.17■□□□□ 0.18
CPNE1-227ENST00000498056 EVX2Q03828 476 aa16.17■□□□□ 0.18
CPNE1-227ENST00000498056 GIMAP6Q6P9H5 292 aa16.17■□□□□ 0.18
CPNE1-227ENST00000498056 STK11IPQ8N1F8 1099 aa16.17■□□□□ 0.18
CPNE1-227ENST00000498056 TRIM34Q9BYJ4 488 aa16.17■□□□□ 0.18
CPNE1-227ENST00000498056 MKRN1Q9UHC7 482 aaKnown RBP16.17■□□□□ 0.18
CPNE1-227ENST00000498056 U3KPZ7 1027 aaPredicted RBP16.17■□□□□ 0.18
CPNE1-227ENST00000498056 EIF5BO60841 1220 aaKnown RBP16.16■□□□□ 0.18
CPNE1-227ENST00000498056 PRAMEF18Q5VWM3 479 aa16.16■□□□□ 0.18
CPNE1-227ENST00000498056 CHADLQ6NUI6 762 aa16.16■□□□□ 0.18
CPNE1-227ENST00000498056 CTR9Q6PD62 1173 aa16.16■□□□□ 0.18
CPNE1-227ENST00000498056 SH3BP5LQ7L8J4 393 aa16.16■□□□□ 0.18
CPNE1-227ENST00000498056 USP48Q86UV5 1035 aa16.16■□□□□ 0.18
CPNE1-227ENST00000498056 CDCA5Q96FF9 252 aa16.16■□□□□ 0.18
CPNE1-227ENST00000498056 DHX36Q9H2U1 1008 aaKnown RBP16.16■□□□□ 0.18
CPNE1-227ENST00000498056 PGAP2Q9UHJ9 254 aa16.16■□□□□ 0.18
CPNE1-227ENST00000498056 FAM196BA6NMK8 535 aa16.15■□□□□ 0.18
CPNE1-227ENST00000498056 SEC24BO95487 1268 aa16.15■□□□□ 0.18
CPNE1-227ENST00000498056 FGAP02671 866 aa16.15■□□□□ 0.18
CPNE1-227ENST00000498056 PPARAQ07869 468 aa16.15■□□□□ 0.18
CPNE1-227ENST00000498056 ALX1Q15699 326 aa16.15■□□□□ 0.18
CPNE1-227ENST00000498056 IMMTQ16891 758 aaKnown RBP16.15■□□□□ 0.18
CPNE1-227ENST00000498056 DLK2Q6UY11 383 aa16.15■□□□□ 0.18
CPNE1-227ENST00000498056 CDC37L1Q7L3B6 337 aa16.15■□□□□ 0.18
CPNE1-227ENST00000498056 TTC6Q86TZ1 520 aa16.15■□□□□ 0.18
CPNE1-227ENST00000498056 CRACR2BQ8N4Y2 399 aaPredicted RBP16.15■□□□□ 0.18
CPNE1-227ENST00000498056 MAP4K1Q92918 833 aa16.15■□□□□ 0.18
CPNE1-227ENST00000498056 ZNF408Q9H9D4 720 aa16.15■□□□□ 0.18
CPNE1-227ENST00000498056 CTNNA3Q9UI47 895 aa16.15■□□□□ 0.18
CPNE1-227ENST00000498056 PHIPQ8WWQ0 1821 aa16.15■□□□□ 0.18
CPNE1-227ENST00000498056 SMIM22K7EJ46 135 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 171.4 ms