RNA–Protein interactions for RNA: ENST00000497415.1

RPN1-208, Transcript of ribophorin I, humanhuman

TSL 4

Gene RPN1, Length 547 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-208ENST00000497415 IFIT2P09913 472 aaKnown RBP22.81■■□□□ 1.24
RPN1-208ENST00000497415 PPP4CP60510 307 aa22.81■■□□□ 1.24
RPN1-208ENST00000497415 SNCAIPQ9Y6H5 919 aa22.81■■□□□ 1.24
RPN1-208ENST00000497415 TESPA1A2RU30 521 aaPredicted RBP22.8■■□□□ 1.24
RPN1-208ENST00000497415 MAP3K10Q02779 954 aa22.8■■□□□ 1.24
RPN1-208ENST00000497415 CFHR5Q9BXR6 569 aa22.8■■□□□ 1.24
RPN1-208ENST00000497415 DCTPP1Q9H773 170 aa22.8■■□□□ 1.24
RPN1-208ENST00000497415 NDUFB9Q9Y6M9 179 aa22.8■■□□□ 1.24
RPN1-208ENST00000497415 DDTLA6NHG4 134 aaPredicted RBP22.79■■□□□ 1.24
RPN1-208ENST00000497415 SPDYE5A6NIY4 337 aa22.79■■□□□ 1.24
RPN1-208ENST00000497415 BAG3O95817 575 aa22.79■■□□□ 1.24
RPN1-208ENST00000497415 PICALMQ13492 652 aa22.79■■□□□ 1.24
RPN1-208ENST00000497415 TMED8Q6PL24 325 aaPredicted RBP22.79■■□□□ 1.24
RPN1-208ENST00000497415 ADGRA1Q86SQ6 560 aa22.79■■□□□ 1.24
RPN1-208ENST00000497415 CNKSR2Q8WXI2 1034 aa22.79■■□□□ 1.24
RPN1-208ENST00000497415 ZKSCAN4Q969J2 545 aaPredicted RBP22.79■■□□□ 1.24
RPN1-208ENST00000497415 LRRCC1Q9C099 1032 aa22.79■■□□□ 1.24
RPN1-208ENST00000497415 ANTXR1Q9H6X2 564 aa22.79■■□□□ 1.24
RPN1-208ENST00000497415 COL2A1P02458 1487 aaPredicted RBP22.79■■□□□ 1.24
RPN1-208ENST00000497415 ALDH1A1P00352 501 aa22.78■■□□□ 1.24
RPN1-208ENST00000497415 INPP5BP32019 993 aa22.78■■□□□ 1.24
RPN1-208ENST00000497415 ERO1BQ86YB8 467 aa22.78■■□□□ 1.24
RPN1-208ENST00000497415 IFNL1Q8IU54 200 aa22.78■■□□□ 1.24
RPN1-208ENST00000497415 MS4A4AQ96JQ5 239 aa22.78■■□□□ 1.24
RPN1-208ENST00000497415 CDK5RAP2Q96SN8 1893 aa22.78■■□□□ 1.24
RPN1-208ENST00000497415 NOL10Q9BSC4 688 aaKnown RBP22.78■■□□□ 1.24
RPN1-208ENST00000497415 AATFQ9NY61 560 aaKnown RBP eCLIP22.78■■□□□ 1.24
RPN1-208ENST00000497415 PCDHB15Q9Y5E8 787 aa22.78■■□□□ 1.24
RPN1-208ENST00000497415 IDH1O75874 414 aaKnown RBP22.77■■□□□ 1.24
RPN1-208ENST00000497415 PLCG2P16885 1265 aa22.77■■□□□ 1.24
RPN1-208ENST00000497415 ZSCAN29Q8IWY8 852 aaPredicted RBP22.77■■□□□ 1.24
RPN1-208ENST00000497415 TEX11Q8IYF3 940 aa22.77■■□□□ 1.24
RPN1-208ENST00000497415 SH3RF3Q8TEJ3 882 aaPredicted RBP22.77■■□□□ 1.24
RPN1-208ENST00000497415 FOCADQ5VW36 1801 aa22.76■■□□□ 1.23
RPN1-208ENST00000497415 IGF2BP3O00425 579 aaKnown RBP eCLIP22.76■■□□□ 1.23
RPN1-208ENST00000497415 TBC1D8O95759 1140 aa22.76■■□□□ 1.23
RPN1-208ENST00000497415 CYP7A1P22680 504 aa22.76■■□□□ 1.23
RPN1-208ENST00000497415 MAP3K12Q12852 859 aa22.76■■□□□ 1.23
RPN1-208ENST00000497415 TTF1Q15361 905 aaPredicted RBP22.76■■□□□ 1.23
RPN1-208ENST00000497415 NOM1Q5C9Z4 860 aaKnown RBP22.76■■□□□ 1.23
RPN1-208ENST00000497415 NOL9Q5SY16 702 aaKnown RBP22.76■■□□□ 1.23
RPN1-208ENST00000497415 CRBNQ96SW2 442 aa22.76■■□□□ 1.23
RPN1-208ENST00000497415 OSBPL5Q9H0X9 879 aaPredicted RBP22.76■■□□□ 1.23
RPN1-208ENST00000497415 PHF20L1A8MW92 1017 aa22.75■■□□□ 1.23
RPN1-208ENST00000497415 GTF2A2P52657 109 aa22.75■■□□□ 1.23
RPN1-208ENST00000497415 OTUD5Q96G74 571 aa22.75■■□□□ 1.23
RPN1-208ENST00000497415 PTPN18Q99952 460 aa22.75■■□□□ 1.23
RPN1-208ENST00000497415 SMARCA5O60264 1052 aaPredicted RBP22.74■■□□□ 1.23
RPN1-208ENST00000497415 TBC1D12O60347 775 aa22.74■■□□□ 1.23
RPN1-208ENST00000497415 ATP5JP18859 108 aa22.74■■□□□ 1.23
RPN1-208ENST00000497415 PPATQ06203 517 aa22.74■■□□□ 1.23
RPN1-208ENST00000497415 PPIL2Q13356 520 aa22.74■■□□□ 1.23
RPN1-208ENST00000497415 MAGEB6Q8N7X4 407 aa22.74■■□□□ 1.23
RPN1-208ENST00000497415 OTUD7BQ6GQQ9 843 aa22.73■■□□□ 1.23
RPN1-208ENST00000497415 CERS3Q8IU89 383 aa22.73■■□□□ 1.23
RPN1-208ENST00000497415 BCL11AQ9H165 835 aa22.73■■□□□ 1.23
RPN1-208ENST00000497415 GPR25O00155 361 aa22.72■■□□□ 1.23
RPN1-208ENST00000497415 IRF6O14896 467 aa22.72■■□□□ 1.23
RPN1-208ENST00000497415 SLURP2P0DP57 97 aa22.72■■□□□ 1.23
RPN1-208ENST00000497415 DYNLL1P63167 89 aaKnown RBP22.72■■□□□ 1.23
RPN1-208ENST00000497415 BRI3BPQ8WY22 251 aa22.72■■□□□ 1.23
RPN1-208ENST00000497415 R3HDMLQ9H3Y0 253 aa22.72■■□□□ 1.23
RPN1-208ENST00000497415 CCL15-CCL14A0A0B4J2E2 113 aa22.71■■□□□ 1.23
RPN1-208ENST00000497415 GOLIM4O00461 696 aa22.71■■□□□ 1.23
RPN1-208ENST00000497415 CCL15Q16663 113 aa22.71■■□□□ 1.23
RPN1-208ENST00000497415 TGFBRAP1Q8WUH2 860 aa22.71■■□□□ 1.23
RPN1-208ENST00000497415 DNAJC2Q99543 621 aaKnown RBP22.71■■□□□ 1.23
RPN1-208ENST00000497415 HAUS7Q99871 368 aa22.71■■□□□ 1.23
RPN1-208ENST00000497415 BOLA2Q9H3K6 86 aa22.71■■□□□ 1.23
RPN1-208ENST00000497415 SNAPC2Q13487 334 aa22.7■■□□□ 1.22
RPN1-208ENST00000497415 SCYL3Q8IZE3 742 aa22.7■■□□□ 1.22
RPN1-208ENST00000497415 ZNF296Q8WUU4 475 aaPredicted RBP22.7■■□□□ 1.22
RPN1-208ENST00000497415 DHX36Q9H2U1 1008 aaKnown RBP22.7■■□□□ 1.22
RPN1-208ENST00000497415 FLT1P17948 1338 aa22.7■■□□□ 1.22
RPN1-208ENST00000497415 SIPA1L1O43166 1804 aa22.7■■□□□ 1.22
RPN1-208ENST00000497415 DOCK1Q14185 1865 aa22.7■■□□□ 1.22
RPN1-208ENST00000497415 CTNND1O60716 968 aaKnown RBP22.69■■□□□ 1.22
RPN1-208ENST00000497415 CETPP11597 493 aa22.69■■□□□ 1.22
RPN1-208ENST00000497415 MAPKAPK5Q8IW41 473 aa22.69■■□□□ 1.22
RPN1-208ENST00000497415 MIGA1Q8NAN2 632 aa22.69■■□□□ 1.22
RPN1-208ENST00000497415 EDC3Q96F86 508 aaKnown RBP22.69■■□□□ 1.22
RPN1-208ENST00000497415 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.69■■□□□ 1.22
RPN1-208ENST00000497415 PAG1Q9NWQ8 432 aa22.69■■□□□ 1.22
RPN1-208ENST00000497415 KCNH4Q9UQ05 1017 aa22.69■■□□□ 1.22
RPN1-208ENST00000497415 PDE6AP16499 860 aa22.68■■□□□ 1.22
RPN1-208ENST00000497415 AAMPQ13685 434 aa22.68■■□□□ 1.22
RPN1-208ENST00000497415 SLC9C2Q5TAH2 1124 aa22.68■■□□□ 1.22
RPN1-208ENST00000497415 RIOK1Q9BRS2 568 aaKnown RBP22.68■■□□□ 1.22
RPN1-208ENST00000497415 PI4KBQ9UBF8 816 aa22.68■■□□□ 1.22
RPN1-208ENST00000497415 HERC5Q9UII4 1024 aaKnown RBP22.68■■□□□ 1.22
RPN1-208ENST00000497415 MYH1P12882 1939 aa22.67■■□□□ 1.22
RPN1-208ENST00000497415 TCRBV5S4A2TA0A5A2 114 aa22.67■■□□□ 1.22
RPN1-208ENST00000497415 DGKZQ13574 1117 aa22.67■■□□□ 1.22
RPN1-208ENST00000497415 METTL16Q86W50 562 aaKnown RBP22.67■■□□□ 1.22
RPN1-208ENST00000497415 FAM43AQ8N2R8 423 aa22.67■■□□□ 1.22
RPN1-208ENST00000497415 MCOLN1Q9GZU1 580 aa22.67■■□□□ 1.22
RPN1-208ENST00000497415 ZCCHC17Q9NP64 241 aaKnown RBP22.67■■□□□ 1.22
RPN1-208ENST00000497415 ECHDC1Q9NTX5 307 aa22.67■■□□□ 1.22
RPN1-208ENST00000497415 PHIPQ8WWQ0 1821 aa22.66■■□□□ 1.22
RPN1-208ENST00000497415 ZNF532Q9HCE3 1301 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms