RNA–Protein interactions for RNA: ENST00000497179.1

USP11-212, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 5

Gene USP11, Length 900 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-212ENST00000497179 GPAA1O43292 621 aa17.38■□□□□ 0.37
USP11-212ENST00000497179 FMR1Q06787 632 aaKnown RBP eCLIP17.38■□□□□ 0.37
USP11-212ENST00000497179 TCP10Q12799 353 aa17.38■□□□□ 0.37
USP11-212ENST00000497179 NMIQ13287 307 aaPredicted RBP17.38■□□□□ 0.37
USP11-212ENST00000497179 TGFBRAP1Q8WUH2 860 aa17.38■□□□□ 0.37
USP11-212ENST00000497179 FAM227BQ96M60 508 aa17.38■□□□□ 0.37
USP11-212ENST00000497179 STRBPQ96SI9 672 aaKnown RBP17.38■□□□□ 0.37
USP11-212ENST00000497179 OSBPL5Q9H0X9 879 aaPredicted RBP17.38■□□□□ 0.37
USP11-212ENST00000497179 DIAPH3Q9NSV4 1193 aa17.38■□□□□ 0.37
USP11-212ENST00000497179 TRPM7Q96QT4 1865 aa17.37■□□□□ 0.37
USP11-212ENST00000497179 USP5P45974 858 aa17.37■□□□□ 0.37
USP11-212ENST00000497179 PRAMEF18Q5VWM3 479 aa17.37■□□□□ 0.37
USP11-212ENST00000497179 MAPKAPK5Q8IW41 473 aa17.37■□□□□ 0.37
USP11-212ENST00000497179 CDAN1Q8IWY9 1227 aa17.37■□□□□ 0.37
USP11-212ENST00000497179 ZFPM1Q8IX07 1006 aa17.37■□□□□ 0.37
USP11-212ENST00000497179 MCMDC2Q4G0Z9 681 aa17.36■□□□□ 0.37
USP11-212ENST00000497179 NBPF12Q5TAG4 269 aaPredicted RBP17.36■□□□□ 0.37
USP11-212ENST00000497179 SH3BP5LQ7L8J4 393 aa17.36■□□□□ 0.37
USP11-212ENST00000497179 ATP8A2Q9NTI2 1148 aa17.36■□□□□ 0.37
USP11-212ENST00000497179 MKRN1Q9UHC7 482 aaKnown RBP17.36■□□□□ 0.37
USP11-212ENST00000497179 PAPPA2Q9BXP8 1791 aa17.35■□□□□ 0.37
USP11-212ENST00000497179 PRKAB2O43741 272 aa17.35■□□□□ 0.37
USP11-212ENST00000497179 CELF2O95319 508 aaKnown RBP17.35■□□□□ 0.37
USP11-212ENST00000497179 GNAT2P19087 354 aa17.35■□□□□ 0.37
USP11-212ENST00000497179 CHMLP26374 656 aa17.35■□□□□ 0.37
USP11-212ENST00000497179 NF2P35240 595 aa17.35■□□□□ 0.37
USP11-212ENST00000497179 C1QTNF8P60827 252 aa17.35■□□□□ 0.37
USP11-212ENST00000497179 SUPT20HL1Q3ZLR7 823 aa17.35■□□□□ 0.37
USP11-212ENST00000497179 CCDC129Q6ZRS4 1044 aa17.35■□□□□ 0.37
USP11-212ENST00000497179 SDR42E1Q8WUS8 393 aa17.35■□□□□ 0.37
USP11-212ENST00000497179 SLC4A4Q9Y6R1 1079 aa17.35■□□□□ 0.37
USP11-212ENST00000497179 DDTLA6NHG4 134 aaPredicted RBP17.34■□□□□ 0.37
USP11-212ENST00000497179 CST9Q5W186 159 aa17.34■□□□□ 0.37
USP11-212ENST00000497179 CCDC171Q6TFL3 1326 aa17.34■□□□□ 0.37
USP11-212ENST00000497179 CWC27Q6UX04 472 aaKnown RBP17.34■□□□□ 0.37
USP11-212ENST00000497179 RAD50Q92878 1312 aa17.34■□□□□ 0.37
USP11-212ENST00000497179 HOOK2Q96ED9 719 aa17.34■□□□□ 0.37
USP11-212ENST00000497179 CSRNP1Q96S65 589 aa17.34■□□□□ 0.37
USP11-212ENST00000497179 DHX36Q9H2U1 1008 aaKnown RBP17.34■□□□□ 0.37
USP11-212ENST00000497179 ZNF408Q9H9D4 720 aa17.34■□□□□ 0.37
USP11-212ENST00000497179 DCP1AQ9NPI6 582 aaPredicted RBP17.34■□□□□ 0.37
USP11-212ENST00000497179 SIPA1L1O43166 1804 aa17.33■□□□□ 0.37
USP11-212ENST00000497179 GSG1L2A8MUP6 293 aa17.33■□□□□ 0.36
USP11-212ENST00000497179 APLP1P51693 650 aa17.33■□□□□ 0.36
USP11-212ENST00000497179 GIMAP6Q6P9H5 292 aa17.33■□□□□ 0.36
USP11-212ENST00000497179 ZNF589Q86UQ0 364 aaPredicted RBP17.33■□□□□ 0.36
USP11-212ENST00000497179 ZSCAN29Q8IWY8 852 aaPredicted RBP17.33■□□□□ 0.36
USP11-212ENST00000497179 SAP30BPQ9UHR5 308 aaKnown RBP17.33■□□□□ 0.36
USP11-212ENST00000497179 MYH1P12882 1939 aa17.32■□□□□ 0.36
USP11-212ENST00000497179 MFAP1P55081 439 aaKnown RBP17.32■□□□□ 0.36
USP11-212ENST00000497179 FKBP1BP68106 108 aa17.32■□□□□ 0.36
USP11-212ENST00000497179 RUFY2Q8WXA3 655 aa17.32■□□□□ 0.36
USP11-212ENST00000497179 GBA2Q9HCG7 927 aaPredicted RBP17.32■□□□□ 0.36
USP11-212ENST00000497179 EPB41L4AQ9HCS5 686 aaPredicted RBP17.32■□□□□ 0.36
USP11-212ENST00000497179 TMEM88BA6NKF7 163 aa17.31■□□□□ 0.36
USP11-212ENST00000497179 PATL2C9JE40 543 aaKnown RBP17.31■□□□□ 0.36
USP11-212ENST00000497179 FOXP2O15409 715 aa17.31■□□□□ 0.36
USP11-212ENST00000497179 CDC45O75419 566 aa17.31■□□□□ 0.36
USP11-212ENST00000497179 DCAF15Q66K64 600 aa17.31■□□□□ 0.36
USP11-212ENST00000497179 DDRGK1Q96HY6 314 aa17.31■□□□□ 0.36
USP11-212ENST00000497179 IL25Q9H293 177 aa17.31■□□□□ 0.36
USP11-212ENST00000497179 MCM9Q9NXL9 1143 aa17.31■□□□□ 0.36
USP11-212ENST00000497179 PALD1Q9ULE6 856 aa17.31■□□□□ 0.36
USP11-212ENST00000497179 PPP1R12BO60237 982 aaPredicted RBP17.3■□□□□ 0.36
USP11-212ENST00000497179 HLA-DOAP06340 250 aa17.3■□□□□ 0.36
USP11-212ENST00000497179 MAP3K10Q02779 954 aa17.3■□□□□ 0.36
USP11-212ENST00000497179 MAP3K11Q16584 847 aa17.3■□□□□ 0.36
USP11-212ENST00000497179 VPS53Q5VIR6 699 aa17.3■□□□□ 0.36
USP11-212ENST00000497179 C2orf69Q8N8R5 385 aa17.3■□□□□ 0.36
USP11-212ENST00000497179 EHD4Q9H223 541 aa17.3■□□□□ 0.36
USP11-212ENST00000497179 PI4KBQ9UBF8 816 aa17.3■□□□□ 0.36
USP11-212ENST00000497179 LAMB1P07942 1786 aa17.3■□□□□ 0.36
USP11-212ENST00000497179 SGSM2O43147 1006 aa17.29■□□□□ 0.36
USP11-212ENST00000497179 TBC1D12O60347 775 aa17.29■□□□□ 0.36
USP11-212ENST00000497179 SBK1Q52WX2 424 aa17.29■□□□□ 0.36
USP11-212ENST00000497179 TTC6Q86TZ1 520 aa17.29■□□□□ 0.36
USP11-212ENST00000497179 METTL16Q86W50 562 aaKnown RBP17.29■□□□□ 0.36
USP11-212ENST00000497179 IFNL3Q8IZI9 196 aa17.29■□□□□ 0.36
USP11-212ENST00000497179 NACAP1Q9BZK3 213 aa17.29■□□□□ 0.36
USP11-212ENST00000497179 CREBZFQ9NS37 354 aa17.29■□□□□ 0.36
USP11-212ENST00000497179 ARPP21Q9UBL0 812 aaPredicted RBP17.29■□□□□ 0.36
USP11-212ENST00000497179 HERC5Q9UII4 1024 aaKnown RBP17.29■□□□□ 0.36
USP11-212ENST00000497179 OTOFQ9HC10 1997 aa17.29■□□□□ 0.36
USP11-212ENST00000497179 BAZ2AQ9UIF9 1905 aaKnown RBP17.29■□□□□ 0.36
USP11-212ENST00000497179 ZMYM6O95789 1325 aa17.28■□□□□ 0.36
USP11-212ENST00000497179 USP2O75604 605 aaPredicted RBP17.28■□□□□ 0.36
USP11-212ENST00000497179 APPP05067 770 aa17.28■□□□□ 0.36
USP11-212ENST00000497179 POLR3DP05423 398 aaPredicted RBP17.28■□□□□ 0.36
USP11-212ENST00000497179 HSPD1P10809 573 aaKnown RBP17.28■□□□□ 0.36
USP11-212ENST00000497179 HSPA6P17066 643 aa17.28■□□□□ 0.36
USP11-212ENST00000497179 TDO2P48775 406 aa17.28■□□□□ 0.36
USP11-212ENST00000497179 PRKG1Q13976 671 aa17.28■□□□□ 0.36
USP11-212ENST00000497179 TTLL12Q14166 644 aaPredicted RBP17.28■□□□□ 0.36
USP11-212ENST00000497179 ALX1Q15699 326 aa17.28■□□□□ 0.36
USP11-212ENST00000497179 CTR9Q6PD62 1173 aa17.28■□□□□ 0.36
USP11-212ENST00000497179 MIGA2Q7L4E1 593 aa17.28■□□□□ 0.36
USP11-212ENST00000497179 ARMC9Q7Z3E5 817 aa17.28■□□□□ 0.36
USP11-212ENST00000497179 AMOTL1Q8IY63 956 aa17.28■□□□□ 0.36
USP11-212ENST00000497179 ESYT1Q9BSJ8 1104 aa17.28■□□□□ 0.36
USP11-212ENST00000497179 ZNF341Q9BYN7 854 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms