RNA–Protein interactions for RNA: ENST00000496738.5

LMNA-216, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-216ENST00000496738 TIAM2Q8IVF5 1701 aa19.97■□□□□ 0.79
LMNA-216ENST00000496738 PSMD14O00487 310 aa19.97■□□□□ 0.79
LMNA-216ENST00000496738 DTNBO60941 627 aa19.97■□□□□ 0.79
LMNA-216ENST00000496738 RHBDL3P58872 404 aa19.97■□□□□ 0.79
LMNA-216ENST00000496738 EXOSC10Q01780 885 aaKnown RBP19.97■□□□□ 0.79
LMNA-216ENST00000496738 TRDNQ13061 729 aa19.97■□□□□ 0.79
LMNA-216ENST00000496738 BRF1Q92994 677 aa19.97■□□□□ 0.79
LMNA-216ENST00000496738 TEKT1Q969V4 418 aa19.97■□□□□ 0.79
LMNA-216ENST00000496738 GPHNQ9NQX3 736 aaPredicted RBP19.97■□□□□ 0.79
LMNA-216ENST00000496738 SAP30BPQ9UHR5 308 aaKnown RBP19.97■□□□□ 0.79
LMNA-216ENST00000496738 CRKP46108 304 aa19.97■□□□□ 0.79
LMNA-216ENST00000496738 RBM5P52756 815 aaKnown RBP eCLIP19.97■□□□□ 0.79
LMNA-216ENST00000496738 AKNAD1Q5T1N1 836 aa19.97■□□□□ 0.79
LMNA-216ENST00000496738 ZNRF3Q9ULT6 936 aa19.97■□□□□ 0.79
LMNA-216ENST00000496738 PRC1O43663 620 aa19.96■□□□□ 0.79
LMNA-216ENST00000496738 ANTXR2P58335 489 aa19.96■□□□□ 0.79
LMNA-216ENST00000496738 GIMAP6Q6P9H5 292 aa19.96■□□□□ 0.79
LMNA-216ENST00000496738 MFSD6Q6ZSS7 791 aa19.96■□□□□ 0.79
LMNA-216ENST00000496738 CYB5R4Q7L1T6 521 aa19.96■□□□□ 0.79
LMNA-216ENST00000496738 ZBTB12Q9Y330 459 aaPredicted RBP19.96■□□□□ 0.79
LMNA-216ENST00000496738 FKBP1AP62942 108 aaKnown RBP19.96■□□□□ 0.79
LMNA-216ENST00000496738 ME3Q16798 604 aa19.96■□□□□ 0.79
LMNA-216ENST00000496738 CDK5RAP2Q96SN8 1893 aa19.96■□□□□ 0.79
LMNA-216ENST00000496738 NAV1Q8NEY1 1877 aa19.95■□□□□ 0.78
LMNA-216ENST00000496738 MCM5P33992 734 aa19.95■□□□□ 0.78
LMNA-216ENST00000496738 STK3Q13188 491 aa19.95■□□□□ 0.78
LMNA-216ENST00000496738 PICALMQ13492 652 aa19.95■□□□□ 0.78
LMNA-216ENST00000496738 NECAB1Q8N987 351 aa19.95■□□□□ 0.78
LMNA-216ENST00000496738 STAG1Q8WVM7 1258 aa19.95■□□□□ 0.78
LMNA-216ENST00000496738 VPS33BQ9H267 617 aa19.95■□□□□ 0.78
LMNA-216ENST00000496738 MKRN1Q9UHC7 482 aaKnown RBP19.95■□□□□ 0.78
LMNA-216ENST00000496738 LAMB1P07942 1786 aa19.95■□□□□ 0.78
LMNA-216ENST00000496738 KDM4AO75164 1064 aa19.95■□□□□ 0.78
LMNA-216ENST00000496738 PRDM1O75626 825 aa19.95■□□□□ 0.78
LMNA-216ENST00000496738 PLCG2P16885 1265 aa19.95■□□□□ 0.78
LMNA-216ENST00000496738 PRELPP51888 382 aa19.95■□□□□ 0.78
LMNA-216ENST00000496738 ANKRD1Q15327 319 aa19.95■□□□□ 0.78
LMNA-216ENST00000496738 JDP2Q8WYK2 163 aa19.95■□□□□ 0.78
LMNA-216ENST00000496738 USP40Q9NVE5 1235 aa19.95■□□□□ 0.78
LMNA-216ENST00000496738 ARPP21Q9UBL0 812 aaPredicted RBP19.95■□□□□ 0.78
LMNA-216ENST00000496738 PSME4Q14997 1843 aa19.95■□□□□ 0.78
LMNA-216ENST00000496738 HHIPL2Q6UWX4 724 aa19.94■□□□□ 0.78
LMNA-216ENST00000496738 ARFGEF1Q9Y6D6 1849 aa19.94■□□□□ 0.78
LMNA-216ENST00000496738 FLT1P17948 1338 aa19.94■□□□□ 0.78
LMNA-216ENST00000496738 APOBRQ0VD83 1088 aa19.94■□□□□ 0.78
LMNA-216ENST00000496738 APOBEC3HQ6NTF7 200 aaKnown RBP19.94■□□□□ 0.78
LMNA-216ENST00000496738 RSBN1LQ6PCB5 846 aaPredicted RBP19.94■□□□□ 0.78
LMNA-216ENST00000496738 CCDC83Q8IWF9 413 aa19.94■□□□□ 0.78
LMNA-216ENST00000496738 ALDH8A1Q9H2A2 487 aaPredicted RBP19.94■□□□□ 0.78
LMNA-216ENST00000496738 PDE4CQ08493 712 aa19.93■□□□□ 0.78
LMNA-216ENST00000496738 CUL4AQ13619 759 aa19.93■□□□□ 0.78
LMNA-216ENST00000496738 ANAPC4Q9UJX5 808 aa19.93■□□□□ 0.78
LMNA-216ENST00000496738 NAP1L2Q9ULW6 460 aaPredicted RBP19.93■□□□□ 0.78
LMNA-216ENST00000496738 CACNB3P54284 484 aa19.93■□□□□ 0.78
LMNA-216ENST00000496738 CXCL9Q07325 125 aa19.93■□□□□ 0.78
LMNA-216ENST00000496738 CDC42EP5Q6NZY7 148 aa19.93■□□□□ 0.78
LMNA-216ENST00000496738 CERS3Q8IU89 383 aa19.93■□□□□ 0.78
LMNA-216ENST00000496738 SYT17Q9BSW7 474 aa19.93■□□□□ 0.78
LMNA-216ENST00000496738 VIL1P09327 827 aaKnown RBP19.92■□□□□ 0.78
LMNA-216ENST00000496738 ST3GAL1Q11201 340 aa19.92■□□□□ 0.78
LMNA-216ENST00000496738 ZKSCAN3Q9BRR0 538 aa19.92■□□□□ 0.78
LMNA-216ENST00000496738 ARHGAP27Q6ZUM4 889 aa19.92■□□□□ 0.78
LMNA-216ENST00000496738 DYNLL2Q96FJ2 89 aa19.92■□□□□ 0.78
LMNA-216ENST00000496738 ZSCAN31Q96LW9 406 aaPredicted RBP19.92■□□□□ 0.78
LMNA-216ENST00000496738 ZDHHC15Q96MV8 337 aa19.92■□□□□ 0.78
LMNA-216ENST00000496738 KRT23Q9C075 422 aa19.92■□□□□ 0.78
LMNA-216ENST00000496738 RNF41Q9H4P4 317 aaPredicted RBP19.92■□□□□ 0.78
LMNA-216ENST00000496738 CNNM2Q9H8M5 875 aa19.92■□□□□ 0.78
LMNA-216ENST00000496738 DDX4Q9NQI0 724 aaKnown RBP19.92■□□□□ 0.78
LMNA-216ENST00000496738 ZSWIM5Q9P217 1185 aa19.92■□□□□ 0.78
LMNA-216ENST00000496738 POLR3DP05423 398 aaPredicted RBP19.91■□□□□ 0.78
LMNA-216ENST00000496738 SBK1Q52WX2 424 aa19.91■□□□□ 0.78
LMNA-216ENST00000496738 DDIT3P35638 169 aa19.91■□□□□ 0.78
LMNA-216ENST00000496738 PLCD1P51178 756 aa19.91■□□□□ 0.78
LMNA-216ENST00000496738 C12orf60Q5U649 245 aa19.91■□□□□ 0.78
LMNA-216ENST00000496738 SERPINA10Q9UK55 444 aa19.91■□□□□ 0.78
LMNA-216ENST00000496738 LTBP3Q9NS15 1303 aa19.9■□□□□ 0.78
LMNA-216ENST00000496738 WDHD1O75717 1129 aaPredicted RBP19.9■□□□□ 0.78
LMNA-216ENST00000496738 CFAP100Q494V2 611 aa19.9■□□□□ 0.78
LMNA-216ENST00000496738 RAB11FIP4Q86YS3 637 aa19.9■□□□□ 0.78
LMNA-216ENST00000496738 SH2B1Q9NRF2 756 aaPredicted RBP19.9■□□□□ 0.78
LMNA-216ENST00000496738 MYO3BQ8WXR4 1341 aa19.9■□□□□ 0.78
LMNA-216ENST00000496738 CIAPIN1Q6FI81 312 aa19.9■□□□□ 0.78
LMNA-216ENST00000496738 AMOTL1Q8IY63 956 aa19.9■□□□□ 0.78
LMNA-216ENST00000496738 AGXT2Q9BYV1 514 aa19.9■□□□□ 0.78
LMNA-216ENST00000496738 SENP2Q9HC62 589 aa19.9■□□□□ 0.78
LMNA-216ENST00000496738 DDX60LQ5H9U9 1706 aaKnown RBP19.89■□□□□ 0.78
LMNA-216ENST00000496738 RANBP6O60518 1105 aaKnown RBP19.89■□□□□ 0.77
LMNA-216ENST00000496738 NFIAQ12857 509 aa19.89■□□□□ 0.77
LMNA-216ENST00000496738 GMLQ99445 158 aa19.89■□□□□ 0.77
LMNA-216ENST00000496738 FOCADQ5VW36 1801 aa19.89■□□□□ 0.77
LMNA-216ENST00000496738 HDLBPQ00341 1268 aaKnown RBP19.88■□□□□ 0.77
LMNA-216ENST00000496738 SLC44A5Q8NCS7 719 aa19.88■□□□□ 0.77
LMNA-216ENST00000496738 TDRD3Q9H7E2 651 aaKnown RBP19.88■□□□□ 0.77
LMNA-216ENST00000496738 BRPF3Q9ULD4 1205 aa19.88■□□□□ 0.77
LMNA-216ENST00000496738 SHTN1A0MZ66 631 aa19.87■□□□□ 0.77
LMNA-216ENST00000496738 SH2B2O14492 632 aaPredicted RBP19.87■□□□□ 0.77
LMNA-216ENST00000496738 SLC3A2P08195 630 aaKnown RBP19.87■□□□□ 0.77
LMNA-216ENST00000496738 TMEM67Q5HYA8 995 aa19.87■□□□□ 0.77
LMNA-216ENST00000496738 FAM47AQ5JRC9 791 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms