RNA–Protein interactions for RNA: ENST00000496427.5

CHCHD3-206, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5

Gene CHCHD3, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-206ENST00000496427 FLIIQ13045 1269 aa8.84□□□□□ -0.99
CHCHD3-206ENST00000496427 FKBP5Q13451 457 aaPredicted RBP8.84□□□□□ -0.99
CHCHD3-206ENST00000496427 TAF1CQ15572 869 aaPredicted RBP8.84□□□□□ -0.99
CHCHD3-206ENST00000496427 ZNF804AQ7Z570 1209 aa8.84□□□□□ -0.99
CHCHD3-206ENST00000496427 ANKRD13AQ8IZ07 590 aa8.84□□□□□ -0.99
CHCHD3-206ENST00000496427 DOCK3Q8IZD9 2030 aa8.84□□□□□ -0.99
CHCHD3-206ENST00000496427 DNAAF4Q8WXU2 420 aa8.84□□□□□ -0.99
CHCHD3-206ENST00000496427 BRI3BPQ8WY22 251 aa8.84□□□□□ -0.99
CHCHD3-206ENST00000496427 ZNF333Q96JL9 665 aa8.84□□□□□ -0.99
CHCHD3-206ENST00000496427 TDRD3Q9H7E2 651 aaKnown RBP8.84□□□□□ -0.99
CHCHD3-206ENST00000496427 PRKRIP1Q9H875 184 aaPredicted RBP8.84□□□□□ -0.99
CHCHD3-206ENST00000496427 PHIPQ8WWQ0 1821 aa8.84□□□□□ -0.99
CHCHD3-206ENST00000496427 ATAD5Q96QE3 1844 aa8.84□□□□□ -0.99
CHCHD3-206ENST00000496427 MYH2Q9UKX2 1941 aa8.84□□□□□ -1
CHCHD3-206ENST00000496427 CCL15-CCL14A0A0B4J2E2 113 aa8.83□□□□□ -1
CHCHD3-206ENST00000496427 TCP10L2B9ZVM9 353 aa8.83□□□□□ -1
CHCHD3-206ENST00000496427 FOXO4P98177 505 aa8.83□□□□□ -1
CHCHD3-206ENST00000496427 CCL15Q16663 113 aa8.83□□□□□ -1
CHCHD3-206ENST00000496427 SUPT20HL1Q3ZLR7 823 aa8.83□□□□□ -1
CHCHD3-206ENST00000496427 EPHA10Q5JZY3 1008 aa8.83□□□□□ -1
CHCHD3-206ENST00000496427 OTUD7BQ6GQQ9 843 aa8.83□□□□□ -1
CHCHD3-206ENST00000496427 FAM43AQ8N2R8 423 aa8.83□□□□□ -1
CHCHD3-206ENST00000496427 SH3TC2Q8TF17 1288 aa8.83□□□□□ -1
CHCHD3-206ENST00000496427 CDCA7LQ96GN5 454 aa8.83□□□□□ -1
CHCHD3-206ENST00000496427 ARHGAP39Q9C0H5 1083 aa8.83□□□□□ -1
CHCHD3-206ENST00000496427 MYH16Q9H6N6 1097 aa8.83□□□□□ -1
CHCHD3-206ENST00000496427 ZNF70Q9UC06 446 aaPredicted RBP8.83□□□□□ -1
CHCHD3-206ENST00000496427 TESPA1A2RU30 521 aaPredicted RBP8.82□□□□□ -1
CHCHD3-206ENST00000496427 F6X3S4 739 aa8.82□□□□□ -1
CHCHD3-206ENST00000496427 LCE2BO14633 110 aa8.82□□□□□ -1
CHCHD3-206ENST00000496427 CACNB3P54284 484 aa8.82□□□□□ -1
CHCHD3-206ENST00000496427 PRSS12P56730 875 aa8.82□□□□□ -1
CHCHD3-206ENST00000496427 VGLL4Q14135 290 aa8.82□□□□□ -1
CHCHD3-206ENST00000496427 GRIK5Q16478 980 aa8.82□□□□□ -1
CHCHD3-206ENST00000496427 TSR1Q2NL82 804 aaKnown RBP8.82□□□□□ -1
CHCHD3-206ENST00000496427 SLC4A8Q2Y0W8 1093 aa8.82□□□□□ -1
CHCHD3-206ENST00000496427 SLC9C1Q4G0N8 1177 aa8.82□□□□□ -1
CHCHD3-206ENST00000496427 CCDC184Q52MB2 194 aa8.82□□□□□ -1
CHCHD3-206ENST00000496427 PPP1R18Q6NYC8 613 aa8.82□□□□□ -1
CHCHD3-206ENST00000496427 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.82□□□□□ -1
CHCHD3-206ENST00000496427 C15orf52Q6ZUT6 534 aaKnown RBP8.82□□□□□ -1
CHCHD3-206ENST00000496427 TEPSINQ96N21 525 aa8.82□□□□□ -1
CHCHD3-206ENST00000496427 MTRQ99707 1265 aa8.82□□□□□ -1
CHCHD3-206ENST00000496427 TMEM39BQ9GZU3 492 aa8.82□□□□□ -1
CHCHD3-206ENST00000496427 TTF2Q9UNY4 1162 aaKnown RBP8.82□□□□□ -1
CHCHD3-206ENST00000496427 DOCK1Q14185 1865 aa8.82□□□□□ -1
CHCHD3-206ENST00000496427 GYG1P46976 350 aa8.81□□□□□ -1
CHCHD3-206ENST00000496427 FKBP1AP62942 108 aaKnown RBP8.81□□□□□ -1
CHCHD3-206ENST00000496427 IFIT5Q13325 482 aaKnown RBP8.81□□□□□ -1
CHCHD3-206ENST00000496427 MFSD14BQ5SR56 506 aa8.81□□□□□ -1
CHCHD3-206ENST00000496427 LMBR1LQ6UX01 489 aa8.81□□□□□ -1
CHCHD3-206ENST00000496427 LINS1Q8NG48 757 aa8.81□□□□□ -1
CHCHD3-206ENST00000496427 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.81□□□□□ -1
CHCHD3-206ENST00000496427 CNNM1Q9NRU3 951 aa8.81□□□□□ -1
CHCHD3-206ENST00000496427 IQSEC3Q9UPP2 1182 aaPredicted RBP8.81□□□□□ -1
CHCHD3-206ENST00000496427 FAM205AQ6ZU69 1335 aa8.8□□□□□ -1
CHCHD3-206ENST00000496427 FANCIQ9NVI1 1328 aa8.8□□□□□ -1
CHCHD3-206ENST00000496427 H0YGN5 161 aa8.8□□□□□ -1
CHCHD3-206ENST00000496427 CRKP46108 304 aa8.8□□□□□ -1
CHCHD3-206ENST00000496427 TNFAIP1Q13829 316 aa8.8□□□□□ -1
CHCHD3-206ENST00000496427 TAF7LQ5H9L4 462 aa8.8□□□□□ -1
CHCHD3-206ENST00000496427 WWC1Q8IX03 1113 aa8.8□□□□□ -1
CHCHD3-206ENST00000496427 DZIP1LQ8IYY4 767 aaKnown RBP8.8□□□□□ -1
CHCHD3-206ENST00000496427 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.8□□□□□ -12e-18■□□□□ 9
CHCHD3-206ENST00000496427 CHMP4AQ9BY43 222 aa8.8□□□□□ -1
CHCHD3-206ENST00000496427 PUS3Q9BZE2 481 aaKnown RBP8.8□□□□□ -1
CHCHD3-206ENST00000496427 ZFYVE28Q9HCC9 887 aa8.8□□□□□ -1
CHCHD3-206ENST00000496427 SNCAIPQ9Y6H5 919 aa8.8□□□□□ -1
CHCHD3-206ENST00000496427 UNCXA6NJT0 531 aa8.79□□□□□ -1
CHCHD3-206ENST00000496427 CTGFP29279 349 aa8.79□□□□□ -1
CHCHD3-206ENST00000496427 GGCXP38435 758 aa8.79□□□□□ -1
CHCHD3-206ENST00000496427 GTF2A2P52657 109 aa8.79□□□□□ -1
CHCHD3-206ENST00000496427 CHAF1AQ13111 956 aaPredicted RBP8.79□□□□□ -1
CHCHD3-206ENST00000496427 MTFR1Q15390 333 aa8.79□□□□□ -1
CHCHD3-206ENST00000496427 BEND3Q5T5X7 828 aa8.79□□□□□ -1
CHCHD3-206ENST00000496427 LDHAL6AQ6ZMR3 332 aa8.79□□□□□ -1
CHCHD3-206ENST00000496427 TDRD7Q8NHU6 1098 aaKnown RBP8.79□□□□□ -1
CHCHD3-206ENST00000496427 TATDN2Q93075 761 aa8.79□□□□□ -1
CHCHD3-206ENST00000496427 SHISA4Q96DD7 197 aa8.79□□□□□ -1
CHCHD3-206ENST00000496427 SALL2Q9Y467 1007 aaPredicted RBP8.79□□□□□ -1
CHCHD3-206ENST00000496427 CSADQ9Y600 493 aa8.79□□□□□ -1
CHCHD3-206ENST00000496427 SPDYE5A6NIY4 337 aa8.78□□□□□ -1
CHCHD3-206ENST00000496427 BTBD19C9JJ37 291 aa8.78□□□□□ -1
CHCHD3-206ENST00000496427 HIBADHP31937 336 aaKnown RBP8.78□□□□□ -1
CHCHD3-206ENST00000496427 LACTBP83111 547 aaPredicted RBP8.78□□□□□ -1
CHCHD3-206ENST00000496427 EXOSC9Q06265 439 aaKnown RBP8.78□□□□□ -1
CHCHD3-206ENST00000496427 CCDC57Q2TAC2 916 aa8.78□□□□□ -1
CHCHD3-206ENST00000496427 NBPF11Q86T75 865 aa8.78□□□□□ -1
CHCHD3-206ENST00000496427 ZKSCAN4Q969J2 545 aaPredicted RBP8.78□□□□□ -1
CHCHD3-206ENST00000496427 SUCLG2Q96I99 432 aa8.78□□□□□ -1
CHCHD3-206ENST00000496427 FAM84BQ96KN1 310 aaPredicted RBP8.78□□□□□ -1
CHCHD3-206ENST00000496427 WRNIP1Q96S55 665 aa8.78□□□□□ -1
CHCHD3-206ENST00000496427 RBM27Q9P2N5 1060 aaKnown RBP8.78□□□□□ -1
CHCHD3-206ENST00000496427 SERPINA10Q9UK55 444 aa8.78□□□□□ -1
CHCHD3-206ENST00000496427 PNMA3Q9UL41 463 aa8.78□□□□□ -1
CHCHD3-206ENST00000496427 FRMPD3Q5JV73 1810 aa8.77□□□□□ -1
CHCHD3-206ENST00000496427 CDK5RAP2Q96SN8 1893 aa8.77□□□□□ -1.01
CHCHD3-206ENST00000496427 SMAPO00193 183 aa8.77□□□□□ -1.01
CHCHD3-206ENST00000496427 GRM8O00222 908 aa8.77□□□□□ -1.01
CHCHD3-206ENST00000496427 IRF6O14896 467 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms