RNA–Protein interactions for RNA: ENST00000494980.5

CHMP2B-205, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 3 BASIC

Gene CHMP2B, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-205ENST00000494980 RTP1P59025 263 aa18.7■□□□□ 0.58
CHMP2B-205ENST00000494980 RNPC3Q96LT9 517 aaKnown RBP18.7■□□□□ 0.58
CHMP2B-205ENST00000494980 GAS2L1Q99501 681 aaPredicted RBP18.7■□□□□ 0.58
CHMP2B-205ENST00000494980 PRDM5Q9NQX1 630 aaPredicted RBP18.7■□□□□ 0.58
CHMP2B-205ENST00000494980 ZHX2Q9Y6X8 837 aa18.7■□□□□ 0.58
CHMP2B-205ENST00000494980 IGKV5-2P06315 115 aa18.69■□□□□ 0.58
CHMP2B-205ENST00000494980 CYP2B6P20813 491 aa18.69■□□□□ 0.58
CHMP2B-205ENST00000494980 CCND3P30281 292 aaPredicted RBP18.69■□□□□ 0.58
CHMP2B-205ENST00000494980 AKNAD1Q5T1N1 836 aa18.69■□□□□ 0.58
CHMP2B-205ENST00000494980 DUSP27Q5VZP5 1158 aa18.69■□□□□ 0.58
CHMP2B-205ENST00000494980 UBE3BQ7Z3V4 1068 aa18.69■□□□□ 0.58
CHMP2B-205ENST00000494980 TEKT1Q969V4 418 aa18.69■□□□□ 0.58
CHMP2B-205ENST00000494980 ZNF576Q9H609 170 aa18.69■□□□□ 0.58
CHMP2B-205ENST00000494980 DOCK2Q92608 1830 aa18.69■□□□□ 0.58
CHMP2B-205ENST00000494980 CACNB2Q08289 660 aaPredicted RBP18.68■□□□□ 0.58
CHMP2B-205ENST00000494980 LMOD3Q0VAK6 560 aa18.68■□□□□ 0.58
CHMP2B-205ENST00000494980 CCDC85BQ15834 202 aaPredicted RBP18.68■□□□□ 0.58
CHMP2B-205ENST00000494980 TDRD7Q8NHU6 1098 aaKnown RBP18.68■□□□□ 0.58
CHMP2B-205ENST00000494980 PNNQ9H307 717 aaKnown RBP18.68■□□□□ 0.58
CHMP2B-205ENST00000494980 ATP11BQ9Y2G3 1177 aa18.68■□□□□ 0.58
CHMP2B-205ENST00000494980 DOCK1Q14185 1865 aa18.68■□□□□ 0.58
CHMP2B-205ENST00000494980 ZDBF2Q9HCK1 2354 aa18.67■□□□□ 0.58
CHMP2B-205ENST00000494980 HDLBPQ00341 1268 aaKnown RBP18.67■□□□□ 0.58
CHMP2B-205ENST00000494980 MAP3K2Q9Y2U5 619 aa18.67■□□□□ 0.58
CHMP2B-205ENST00000494980 TRANK1O15050 2925 aa18.66■□□□□ 0.58
CHMP2B-205ENST00000494980 ZDHHC15Q96MV8 337 aa18.66■□□□□ 0.58
CHMP2B-205ENST00000494980 PICK1Q9NRD5 415 aa18.66■□□□□ 0.58
CHMP2B-205ENST00000494980 AGTPBP1Q9UPW5 1226 aa18.66■□□□□ 0.58
CHMP2B-205ENST00000494980 AFG3L2Q9Y4W6 797 aa18.66■□□□□ 0.58
CHMP2B-205ENST00000494980 PLXNA1Q9UIW2 1896 aa18.66■□□□□ 0.58
CHMP2B-205ENST00000494980 CFAP54Q96N23 3096 aa18.65■□□□□ 0.58
CHMP2B-205ENST00000494980 DDX58O95786 925 aaKnown RBP18.65■□□□□ 0.58
CHMP2B-205ENST00000494980 ZKSCAN1P17029 563 aaPredicted RBP18.65■□□□□ 0.58
CHMP2B-205ENST00000494980 CWF19L2Q2TBE0 894 aaKnown RBP18.65■□□□□ 0.58
CHMP2B-205ENST00000494980 TREML2Q5T2D2 321 aa18.65■□□□□ 0.58
CHMP2B-205ENST00000494980 APOBEC3HQ6NTF7 200 aaKnown RBP18.65■□□□□ 0.58
CHMP2B-205ENST00000494980 PNMA3Q9UL41 463 aa18.65■□□□□ 0.58
CHMP2B-205ENST00000494980 LOC285556D6RIA3 1793 aa18.65■□□□□ 0.58
CHMP2B-205ENST00000494980 FAM86C2PA6NEL3 165 aa18.64■□□□□ 0.57
CHMP2B-205ENST00000494980 TRIM75PA6NK02 468 aa18.64■□□□□ 0.57
CHMP2B-205ENST00000494980 BMP1P13497 986 aa18.64■□□□□ 0.57
CHMP2B-205ENST00000494980 PTPRAP18433 802 aa18.64■□□□□ 0.57
CHMP2B-205ENST00000494980 GYG1P46976 350 aa18.64■□□□□ 0.57
CHMP2B-205ENST00000494980 TCP10Q12799 353 aa18.64■□□□□ 0.57
CHMP2B-205ENST00000494980 SCYL3Q8IZE3 742 aa18.64■□□□□ 0.57
CHMP2B-205ENST00000494980 FAM151AQ8WW52 585 aa18.64■□□□□ 0.57
CHMP2B-205ENST00000494980 TIFAQ96CG3 184 aa18.64■□□□□ 0.57
CHMP2B-205ENST00000494980 PRDM12Q9H4Q4 367 aa18.64■□□□□ 0.57
CHMP2B-205ENST00000494980 C11orf16Q9NQ32 467 aa18.64■□□□□ 0.57
CHMP2B-205ENST00000494980 USP34Q70CQ2 3546 aa18.63■□□□□ 0.57
CHMP2B-205ENST00000494980 ANKRD18BA2A2Z9 1011 aa18.63■□□□□ 0.57
CHMP2B-205ENST00000494980 PLIN1O60240 522 aa18.63■□□□□ 0.57
CHMP2B-205ENST00000494980 TMPOP42166 694 aaKnown RBP18.63■□□□□ 0.57
CHMP2B-205ENST00000494980 PLA2G12BQ9BX93 195 aa18.63■□□□□ 0.57
CHMP2B-205ENST00000494980 CSF1RP07333 972 aa18.62■□□□□ 0.57
CHMP2B-205ENST00000494980 XRCC5P13010 732 aaKnown RBP18.62■□□□□ 0.57
CHMP2B-205ENST00000494980 HIBADHP31937 336 aaKnown RBP18.62■□□□□ 0.57
CHMP2B-205ENST00000494980 GCLCP48506 637 aaPredicted RBP18.62■□□□□ 0.57
CHMP2B-205ENST00000494980 CHAF1AQ13111 956 aaPredicted RBP18.62■□□□□ 0.57
CHMP2B-205ENST00000494980 NEURL1BA8MQ27 555 aa18.61■□□□□ 0.57
CHMP2B-205ENST00000494980 H7C1W4 665 aa18.61■□□□□ 0.57
CHMP2B-205ENST00000494980 EPHB4P54760 987 aa18.61■□□□□ 0.57
CHMP2B-205ENST00000494980 ADGRE1Q14246 886 aa18.61■□□□□ 0.57
CHMP2B-205ENST00000494980 SOCS4Q8WXH5 440 aa18.61■□□□□ 0.57
CHMP2B-205ENST00000494980 NUDT12Q9BQG2 462 aa18.61■□□□□ 0.57
CHMP2B-205ENST00000494980 PDLIM7Q9NR12 457 aa18.61■□□□□ 0.57
CHMP2B-205ENST00000494980 CXXC1Q9P0U4 656 aaPredicted RBP18.61■□□□□ 0.57
CHMP2B-205ENST00000494980 IQSEC3Q9UPP2 1182 aaPredicted RBP18.61■□□□□ 0.57
CHMP2B-205ENST00000494980 SPTBN4Q9H254 2564 aa18.6■□□□□ 0.57
CHMP2B-205ENST00000494980 GPR37L1O60883 481 aa18.6■□□□□ 0.57
CHMP2B-205ENST00000494980 TFF2Q03403 129 aa18.6■□□□□ 0.57
CHMP2B-205ENST00000494980 NEXNQ0ZGT2 675 aa18.6■□□□□ 0.57
CHMP2B-205ENST00000494980 CCL14Q16627 93 aa18.6■□□□□ 0.57
CHMP2B-205ENST00000494980 SH3RF1Q7Z6J0 888 aa18.6■□□□□ 0.57
CHMP2B-205ENST00000494980 TRMT44Q8IYL2 757 aaKnown RBP18.6■□□□□ 0.57
CHMP2B-205ENST00000494980 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.59■□□□□ 0.57
CHMP2B-205ENST00000494980 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.59■□□□□ 0.57
CHMP2B-205ENST00000494980 PI4KAP2A4QPH2 592 aa18.59■□□□□ 0.57
CHMP2B-205ENST00000494980 TRIM43BA6NCK2 446 aa18.59■□□□□ 0.57
CHMP2B-205ENST00000494980 PHF20L1A8MW92 1017 aa18.59■□□□□ 0.57
CHMP2B-205ENST00000494980 DNM1LO00429 736 aa18.59■□□□□ 0.57
CHMP2B-205ENST00000494980 IGFBP4P22692 258 aa18.59■□□□□ 0.57
CHMP2B-205ENST00000494980 KCNQ1P51787 676 aa18.59■□□□□ 0.57
CHMP2B-205ENST00000494980 TRIM60Q495X7 471 aa18.59■□□□□ 0.57
CHMP2B-205ENST00000494980 PI4KAP1Q8N8J0 262 aa18.59■□□□□ 0.57
CHMP2B-205ENST00000494980 TRIM43Q96BQ3 446 aaPredicted RBP18.59■□□□□ 0.57
CHMP2B-205ENST00000494980 FAM84BQ96KN1 310 aaPredicted RBP18.59■□□□□ 0.57
CHMP2B-205ENST00000494980 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.59■□□□□ 0.57
CHMP2B-205ENST00000494980 ATRNL1Q5VV63 1379 aa18.58■□□□□ 0.57
CHMP2B-205ENST00000494980 NFIAQ12857 509 aa18.58■□□□□ 0.56
CHMP2B-205ENST00000494980 NEUROD2Q15784 382 aa18.58■□□□□ 0.56
CHMP2B-205ENST00000494980 CCDC84Q86UT8 332 aaPredicted RBP18.58■□□□□ 0.56
CHMP2B-205ENST00000494980 TBC1D22AQ8WUA7 517 aa18.58■□□□□ 0.56
CHMP2B-205ENST00000494980 TSPYL2Q9H2G4 693 aaPredicted RBP18.58■□□□□ 0.56
CHMP2B-205ENST00000494980 DAGLAQ9Y4D2 1042 aa18.58■□□□□ 0.56
CHMP2B-205ENST00000494980 LRRC37A2A6NM11 1700 aa18.57■□□□□ 0.56
CHMP2B-205ENST00000494980 IFIT5Q13325 482 aaKnown RBP18.57■□□□□ 0.56
CHMP2B-205ENST00000494980 KSR2Q6VAB6 950 aa18.57■□□□□ 0.56
CHMP2B-205ENST00000494980 CASP7P55210 303 aa18.56■□□□□ 0.56
CHMP2B-205ENST00000494980 SLC39A5Q6ZMH5 540 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms