RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 FPGT-TNNI3KV9GXZ4 949 aa11.81□□□□□ -0.52
MSH5-218ENST00000494646 GAKO14976 1311 aa11.81□□□□□ -0.52
MSH5-218ENST00000494646 DDTLA6NHG4 134 aaPredicted RBP11.8□□□□□ -0.52
MSH5-218ENST00000494646 ECM2O94769 699 aaPredicted RBP11.8□□□□□ -0.52
MSH5-218ENST00000494646 UQCRFS1P1P0C7P4 283 aa11.8□□□□□ -0.52
MSH5-218ENST00000494646 ARID4AP29374 1257 aaPredicted RBP11.8□□□□□ -0.52
MSH5-218ENST00000494646 SP3Q02447 781 aa11.8□□□□□ -0.52
MSH5-218ENST00000494646 CCDC158Q5M9N0 1113 aa11.8□□□□□ -0.52
MSH5-218ENST00000494646 FBXO46Q6PJ61 603 aaPredicted RBP11.8□□□□□ -0.52
MSH5-218ENST00000494646 OTOP1Q7RTM1 612 aa11.8□□□□□ -0.52
MSH5-218ENST00000494646 NSUN4Q96CB9 384 aaKnown RBP11.8□□□□□ -0.52
MSH5-218ENST00000494646 IDI2Q9BXS1 227 aa11.8□□□□□ -0.52
MSH5-218ENST00000494646 ZFYVE28Q9HCC9 887 aa11.8□□□□□ -0.52
MSH5-218ENST00000494646 GPR108Q9NPR9 543 aa11.8□□□□□ -0.52
MSH5-218ENST00000494646 DDX4Q9NQI0 724 aaKnown RBP11.8□□□□□ -0.52
MSH5-218ENST00000494646 LRP2BPQ9P2M1 347 aa11.8□□□□□ -0.52
MSH5-218ENST00000494646 ZNF112Q9UJU3 913 aa11.8□□□□□ -0.52
MSH5-218ENST00000494646 MROH7-TTC4A0A0A0MT08 1334 aa11.8□□□□□ -0.52
MSH5-218ENST00000494646 PDS5AQ29RF7 1337 aaKnown RBP11.8□□□□□ -0.52
MSH5-218ENST00000494646 GPR75-ASB3A0A0A6YYF3 556 aa11.79□□□□□ -0.52
MSH5-218ENST00000494646 BTBD19C9JJ37 291 aa11.79□□□□□ -0.52
MSH5-218ENST00000494646 ENTPD3O75355 529 aa11.79□□□□□ -0.52
MSH5-218ENST00000494646 WDHD1O75717 1129 aaPredicted RBP11.79□□□□□ -0.52
MSH5-218ENST00000494646 LDHCP07864 332 aa11.79□□□□□ -0.52
MSH5-218ENST00000494646 CETPP11597 493 aa11.79□□□□□ -0.52
MSH5-218ENST00000494646 CAP1Q01518 475 aa11.79□□□□□ -0.52
MSH5-218ENST00000494646 PPATQ06203 517 aa11.79□□□□□ -0.52
MSH5-218ENST00000494646 PPIL2Q13356 520 aa11.79□□□□□ -0.52
MSH5-218ENST00000494646 SNAPC2Q13487 334 aa11.79□□□□□ -0.52
MSH5-218ENST00000494646 CEP85Q6P2H3 762 aa11.79□□□□□ -0.52
MSH5-218ENST00000494646 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.79□□□□□ -0.52
MSH5-218ENST00000494646 ERO1AQ96HE7 468 aa11.79□□□□□ -0.52
MSH5-218ENST00000494646 BCL11AQ9H165 835 aa11.79□□□□□ -0.52
MSH5-218ENST00000494646 NOP58Q9Y2X3 529 aaKnown RBP11.79□□□□□ -0.52
MSH5-218ENST00000494646 DOCK2Q92608 1830 aa11.79□□□□□ -0.52
MSH5-218ENST00000494646 RPAP1Q9BWH6 1393 aaPredicted RBP11.79□□□□□ -0.52
MSH5-218ENST00000494646 CYP2E1P05181 493 aaPredicted RBP11.78□□□□□ -0.52
MSH5-218ENST00000494646 RHBDL3P58872 404 aa11.78□□□□□ -0.52
MSH5-218ENST00000494646 GSTO1P78417 241 aa11.78□□□□□ -0.52
MSH5-218ENST00000494646 EAF2Q96CJ1 260 aaPredicted RBP11.78□□□□□ -0.52
MSH5-218ENST00000494646 EFCC1Q9HA90 598 aa11.78□□□□□ -0.52
MSH5-218ENST00000494646 TLR7Q9NYK1 1049 aaKnown RBP11.78□□□□□ -0.52
MSH5-218ENST00000494646 EXOC6BQ9Y2D4 811 aa11.78□□□□□ -0.52
MSH5-218ENST00000494646 COG6Q9Y2V7 657 aa11.78□□□□□ -0.52
MSH5-218ENST00000494646 FAM196BA6NMK8 535 aa11.77□□□□□ -0.53
MSH5-218ENST00000494646 PHF20L1A8MW92 1017 aa11.77□□□□□ -0.53
MSH5-218ENST00000494646 APBB1O00213 710 aa11.77□□□□□ -0.53
MSH5-218ENST00000494646 ZAP70P43403 619 aa11.77□□□□□ -0.53
MSH5-218ENST00000494646 NAA16Q6N069 864 aaPredicted RBP11.77□□□□□ -0.53
MSH5-218ENST00000494646 SH3RF3Q8TEJ3 882 aaPredicted RBP11.77□□□□□ -0.53
MSH5-218ENST00000494646 DBNLQ9UJU6 430 aaKnown RBP11.77□□□□□ -0.53
MSH5-218ENST00000494646 PTPN22Q9Y2R2 807 aa11.77□□□□□ -0.53
MSH5-218ENST00000494646 NDUFB9Q9Y6M9 179 aa11.77□□□□□ -0.53
MSH5-218ENST00000494646 ZHX2Q9Y6X8 837 aa11.77□□□□□ -0.53
MSH5-218ENST00000494646 MS4A1P11836 297 aa11.76□□□□□ -0.53
MSH5-218ENST00000494646 MAP3K10Q02779 954 aa11.76□□□□□ -0.53
MSH5-218ENST00000494646 NOL9Q5SY16 702 aaKnown RBP11.76□□□□□ -0.53
MSH5-218ENST00000494646 TEX11Q8IYF3 940 aa11.76□□□□□ -0.53
MSH5-218ENST00000494646 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.76□□□□□ -0.53
MSH5-218ENST00000494646 IL1RAPL2Q9NP60 686 aa11.76□□□□□ -0.53
MSH5-218ENST00000494646 PICK1Q9NRD5 415 aa11.76□□□□□ -0.53
MSH5-218ENST00000494646 AATFQ9NY61 560 aaKnown RBP eCLIP11.76□□□□□ -0.53
MSH5-218ENST00000494646 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.76□□□□□ -0.53
MSH5-218ENST00000494646 ZSWIM8A7E2V4 1837 aa11.76□□□□□ -0.53
MSH5-218ENST00000494646 HTTP42858 3142 aa11.75□□□□□ -0.53
MSH5-218ENST00000494646 CDK5RAP2Q96SN8 1893 aa11.75□□□□□ -0.53
MSH5-218ENST00000494646 PDHXO00330 501 aa11.75□□□□□ -0.53
MSH5-218ENST00000494646 TLR2O60603 784 aa11.75□□□□□ -0.53
MSH5-218ENST00000494646 MOGSQ13724 837 aa11.75□□□□□ -0.53
MSH5-218ENST00000494646 ADGRA1Q86SQ6 560 aa11.75□□□□□ -0.53
MSH5-218ENST00000494646 CCDC84Q86UT8 332 aaPredicted RBP11.75□□□□□ -0.53
MSH5-218ENST00000494646 SCYL3Q8IZE3 742 aa11.75□□□□□ -0.53
MSH5-218ENST00000494646 NOL10Q9BSC4 688 aaKnown RBP11.75□□□□□ -0.53
MSH5-218ENST00000494646 ARHGAP39Q9C0H5 1083 aa11.75□□□□□ -0.53
MSH5-218ENST00000494646 PIH1D3Q9NQM4 214 aaKnown RBP11.75□□□□□ -0.53
MSH5-218ENST00000494646 CPA4Q9UI42 421 aa11.75□□□□□ -0.53
MSH5-218ENST00000494646 RCAN3Q9UKA8 241 aa11.75□□□□□ -0.53
MSH5-218ENST00000494646 KCNH4Q9UQ05 1017 aa11.75□□□□□ -0.53
MSH5-218ENST00000494646 ATRNL1Q5VV63 1379 aa11.75□□□□□ -0.53
MSH5-218ENST00000494646 CXCL11O14625 94 aa11.74□□□□□ -0.53
MSH5-218ENST00000494646 CTNND1O60716 968 aaKnown RBP11.74□□□□□ -0.53
MSH5-218ENST00000494646 BAG3O95817 575 aa11.74□□□□□ -0.53
MSH5-218ENST00000494646 PTPRAP18433 802 aa11.74□□□□□ -0.53
MSH5-218ENST00000494646 DYNLL1P63167 89 aaKnown RBP11.74□□□□□ -0.53
MSH5-218ENST00000494646 GADL1Q6ZQY3 521 aa11.74□□□□□ -0.53
MSH5-218ENST00000494646 ANKRD23Q86SG2 305 aa11.74□□□□□ -0.53
MSH5-218ENST00000494646 AACSQ86V21 672 aa11.74□□□□□ -0.53
MSH5-218ENST00000494646 MAPKAPK5Q8IW41 473 aa11.74□□□□□ -0.53
MSH5-218ENST00000494646 TGFBRAP1Q8WUH2 860 aa11.74□□□□□ -0.53
MSH5-218ENST00000494646 ZNF512BQ96KM6 892 aaPredicted RBP11.74□□□□□ -0.53
MSH5-218ENST00000494646 OSBPL5Q9H0X9 879 aaPredicted RBP11.74□□□□□ -0.53
MSH5-218ENST00000494646 ANTXR1Q9H6X2 564 aa11.74□□□□□ -0.53
MSH5-218ENST00000494646 AFG3L2Q9Y4W6 797 aa11.74□□□□□ -0.53
MSH5-218ENST00000494646 RFX7Q2KHR2 1363 aa11.74□□□□□ -0.53
MSH5-218ENST00000494646 PHIPQ8WWQ0 1821 aa11.74□□□□□ -0.53
MSH5-218ENST00000494646 IDH1O75874 414 aaKnown RBP11.73□□□□□ -0.53
MSH5-218ENST00000494646 MAP4K4O95819 1239 aaPredicted RBP11.73□□□□□ -0.53
MSH5-218ENST00000494646 CYP7A1P22680 504 aa11.73□□□□□ -0.53
MSH5-218ENST00000494646 PPP4CP60510 307 aa11.73□□□□□ -0.53
MSH5-218ENST00000494646 RRP1BQ14684 758 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms