RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-223ENST00000493618 SH3BP5LQ7L8J4 393 aa18.05■□□□□ 0.48
ATG4B-223ENST00000493618 SLF2Q8IX21 1173 aa18.05■□□□□ 0.48
ATG4B-223ENST00000493618 SSH3Q8TE77 659 aa18.05■□□□□ 0.48
ATG4B-223ENST00000493618 IDI2Q9BXS1 227 aa18.05■□□□□ 0.48
ATG4B-223ENST00000493618 SNRKQ9NRH2 765 aa18.05■□□□□ 0.48
ATG4B-223ENST00000493618 HTTP42858 3142 aa18.05■□□□□ 0.48
ATG4B-223ENST00000493618 DDTLA6NHG4 134 aaPredicted RBP18.04■□□□□ 0.48
ATG4B-223ENST00000493618 ZBTB7BO15156 539 aaPredicted RBP18.04■□□□□ 0.48
ATG4B-223ENST00000493618 ENTPD3O75355 529 aa18.04■□□□□ 0.48
ATG4B-223ENST00000493618 SURF6O75683 361 aaKnown RBP18.04■□□□□ 0.48
ATG4B-223ENST00000493618 WDHD1O75717 1129 aaPredicted RBP18.04■□□□□ 0.48
ATG4B-223ENST00000493618 ECM2O94769 699 aaPredicted RBP18.04■□□□□ 0.48
ATG4B-223ENST00000493618 DBNDD2Q9BQY9 259 aa18.04■□□□□ 0.48
ATG4B-223ENST00000493618 EFCC1Q9HA90 598 aa18.04■□□□□ 0.48
ATG4B-223ENST00000493618 RAI14Q9P0K7 980 aa18.04■□□□□ 0.48
ATG4B-223ENST00000493618 ATRNL1Q5VV63 1379 aa18.04■□□□□ 0.48
ATG4B-223ENST00000493618 FOCADQ5VW36 1801 aa18.03■□□□□ 0.48
ATG4B-223ENST00000493618 TNNI3KQ59H18 835 aa18.03■□□□□ 0.48
ATG4B-223ENST00000493618 TTC39AQ5SRH9 613 aa18.03■□□□□ 0.48
ATG4B-223ENST00000493618 PANK1Q8TE04 598 aa18.03■□□□□ 0.48
ATG4B-223ENST00000493618 NSUN4Q96CB9 384 aaKnown RBP18.03■□□□□ 0.48
ATG4B-223ENST00000493618 FAM163AQ96GL9 167 aaPredicted RBP18.03■□□□□ 0.48
ATG4B-223ENST00000493618 PTPN22Q9Y2R2 807 aa18.03■□□□□ 0.48
ATG4B-223ENST00000493618 FPGT-TNNI3KV9GXZ4 949 aa18.03■□□□□ 0.48
ATG4B-223ENST00000493618 RBBP6Q7Z6E9 1792 aaKnown RBP18.02■□□□□ 0.48
ATG4B-223ENST00000493618 GPR75-ASB3A0A0A6YYF3 556 aa18.02■□□□□ 0.48
ATG4B-223ENST00000493618 MGAMO43451 1857 aa18.02■□□□□ 0.48
ATG4B-223ENST00000493618 UQCRFS1P1P0C7P4 283 aa18.02■□□□□ 0.48
ATG4B-223ENST00000493618 CENPFP49454 3210 aa18.02■□□□□ 0.48
ATG4B-223ENST00000493618 RHBDL3P58872 404 aa18.02■□□□□ 0.48
ATG4B-223ENST00000493618 SIPA1L1O43166 1804 aa18.01■□□□□ 0.47
ATG4B-223ENST00000493618 PHF20L1A8MW92 1017 aa18.01■□□□□ 0.47
ATG4B-223ENST00000493618 GSTO1P78417 241 aa18.01■□□□□ 0.47
ATG4B-223ENST00000493618 NOL9Q5SY16 702 aaKnown RBP18.01■□□□□ 0.47
ATG4B-223ENST00000493618 ARHGAP39Q9C0H5 1083 aa18.01■□□□□ 0.47
ATG4B-223ENST00000493618 LRP2BPQ9P2M1 347 aa18.01■□□□□ 0.47
ATG4B-223ENST00000493618 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.01■□□□□ 0.47
ATG4B-223ENST00000493618 FAM196BA6NMK8 535 aa18■□□□□ 0.47
ATG4B-223ENST00000493618 LDHCP07864 332 aa18■□□□□ 0.47
ATG4B-223ENST00000493618 CCDC8Q9H0W5 538 aaPredicted RBP18■□□□□ 0.47
ATG4B-223ENST00000493618 GPR108Q9NPR9 543 aa18■□□□□ 0.47
ATG4B-223ENST00000493618 TLR7Q9NYK1 1049 aaKnown RBP18■□□□□ 0.47
ATG4B-223ENST00000493618 KCNH4Q9UQ05 1017 aa18■□□□□ 0.47
ATG4B-223ENST00000493618 PDHXO00330 501 aa17.99■□□□□ 0.47
ATG4B-223ENST00000493618 TLR2O60603 784 aa17.99■□□□□ 0.47
ATG4B-223ENST00000493618 MOGSQ13724 837 aa17.99■□□□□ 0.47
ATG4B-223ENST00000493618 CCDC158Q5M9N0 1113 aa17.99■□□□□ 0.47
ATG4B-223ENST00000493618 SCYL3Q8IZE3 742 aa17.99■□□□□ 0.47
ATG4B-223ENST00000493618 CPA4Q9UI42 421 aa17.99■□□□□ 0.47
ATG4B-223ENST00000493618 CEP85Q6P2H3 762 aa17.98■□□□□ 0.47
ATG4B-223ENST00000493618 ANKRD23Q86SG2 305 aa17.98■□□□□ 0.47
ATG4B-223ENST00000493618 CCDC84Q86UT8 332 aaPredicted RBP17.98■□□□□ 0.47
ATG4B-223ENST00000493618 SH3RF3Q8TEJ3 882 aaPredicted RBP17.98■□□□□ 0.47
ATG4B-223ENST00000493618 ZCCHC17Q9NP64 241 aaKnown RBP17.98■□□□□ 0.47
ATG4B-223ENST00000493618 PICK1Q9NRD5 415 aa17.98■□□□□ 0.47
ATG4B-223ENST00000493618 NOP58Q9Y2X3 529 aaKnown RBP17.98■□□□□ 0.47
ATG4B-223ENST00000493618 PTCH2Q9Y6C5 1203 aa17.98■□□□□ 0.47
ATG4B-223ENST00000493618 ZHX2Q9Y6X8 837 aa17.98■□□□□ 0.47
ATG4B-223ENST00000493618 MYH1P12882 1939 aa17.98■□□□□ 0.47
ATG4B-223ENST00000493618 POTEFA5A3E0 1075 aa17.97■□□□□ 0.47
ATG4B-223ENST00000493618 CYP2E1P05181 493 aaPredicted RBP17.97■□□□□ 0.47
ATG4B-223ENST00000493618 PTPRAP18433 802 aa17.97■□□□□ 0.47
ATG4B-223ENST00000493618 ZAP70P43403 619 aa17.97■□□□□ 0.47
ATG4B-223ENST00000493618 NAA16Q6N069 864 aaPredicted RBP17.97■□□□□ 0.47
ATG4B-223ENST00000493618 TEX11Q8IYF3 940 aa17.97■□□□□ 0.47
ATG4B-223ENST00000493618 AATFQ9NY61 560 aaKnown RBP eCLIP17.97■□□□□ 0.47
ATG4B-223ENST00000493618 DBNLQ9UJU6 430 aaKnown RBP17.97■□□□□ 0.47
ATG4B-223ENST00000493618 EXOC6BQ9Y2D4 811 aa17.97■□□□□ 0.47
ATG4B-223ENST00000493618 LACTBP83111 547 aaPredicted RBP17.96■□□□□ 0.47
ATG4B-223ENST00000493618 MAP3K10Q02779 954 aa17.96■□□□□ 0.47
ATG4B-223ENST00000493618 GPAT2Q6NUI2 795 aa17.96■□□□□ 0.47
ATG4B-223ENST00000493618 GADL1Q6ZQY3 521 aa17.96■□□□□ 0.47
ATG4B-223ENST00000493618 ADGRA1Q86SQ6 560 aa17.96■□□□□ 0.47
ATG4B-223ENST00000493618 EAF2Q96CJ1 260 aaPredicted RBP17.96■□□□□ 0.47
ATG4B-223ENST00000493618 NOL10Q9BSC4 688 aaKnown RBP17.96■□□□□ 0.47
ATG4B-223ENST00000493618 OSBPL5Q9H0X9 879 aaPredicted RBP17.96■□□□□ 0.47
ATG4B-223ENST00000493618 PIH1D3Q9NQM4 214 aaKnown RBP17.96■□□□□ 0.47
ATG4B-223ENST00000493618 CXCL11O14625 94 aa17.95■□□□□ 0.46
ATG4B-223ENST00000493618 KIF22Q14807 665 aa17.95■□□□□ 0.46
ATG4B-223ENST00000493618 ARHGEF6Q15052 776 aa17.95■□□□□ 0.46
ATG4B-223ENST00000493618 C17orf99Q6UX52 265 aa17.95■□□□□ 0.46
ATG4B-223ENST00000493618 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.95■□□□□ 0.46
ATG4B-223ENST00000493618 AFG3L2Q9Y4W6 797 aa17.95■□□□□ 0.46
ATG4B-223ENST00000493618 NDUFB9Q9Y6M9 179 aa17.95■□□□□ 0.46
ATG4B-223ENST00000493618 ADGRA2Q96PE1 1338 aa17.95■□□□□ 0.46
ATG4B-223ENST00000493618 LOC285556D6RIA3 1793 aa17.94■□□□□ 0.46
ATG4B-223ENST00000493618 CTNND1O60716 968 aaKnown RBP17.94■□□□□ 0.46
ATG4B-223ENST00000493618 MYCP01106 439 aaPredicted RBP17.94■□□□□ 0.46
ATG4B-223ENST00000493618 CYP2C8P10632 490 aa17.94■□□□□ 0.46
ATG4B-223ENST00000493618 CTGFP29279 349 aa17.94■□□□□ 0.46
ATG4B-223ENST00000493618 ARMC5Q96C12 935 aa17.94■□□□□ 0.46
ATG4B-223ENST00000493618 COL2A1P02458 1487 aaPredicted RBP17.94■□□□□ 0.46
ATG4B-223ENST00000493618 A0A0G2JLL6 359 aaPredicted RBP17.93■□□□□ 0.46
ATG4B-223ENST00000493618 TRIM75PA6NK02 468 aa17.93■□□□□ 0.46
ATG4B-223ENST00000493618 NPM3O75607 178 aaKnown RBP17.93■□□□□ 0.46
ATG4B-223ENST00000493618 RRP1BQ14684 758 aaKnown RBP17.93■□□□□ 0.46
ATG4B-223ENST00000493618 SLC9C1Q4G0N8 1177 aa17.93■□□□□ 0.46
ATG4B-223ENST00000493618 PRRT2Q7Z6L0 340 aaPredicted RBP17.93■□□□□ 0.46
ATG4B-223ENST00000493618 MAPKAPK5Q8IW41 473 aa17.93■□□□□ 0.46
ATG4B-223ENST00000493618 BCL11AQ9H165 835 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms