RNA–Protein interactions for RNA: ENST00000493455.6

HPS4-216, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 986 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-216ENST00000493455 TNFAIP1Q13829 316 aa18.86■□□□□ 0.61
HPS4-216ENST00000493455 PRAMEF18Q5VWM3 479 aa18.86■□□□□ 0.61
HPS4-216ENST00000493455 DLK2Q6UY11 383 aa18.86■□□□□ 0.61
HPS4-216ENST00000493455 KIAA1211Q6ZU35 1233 aa18.86■□□□□ 0.61
HPS4-216ENST00000493455 KRT26Q7Z3Y9 468 aa18.86■□□□□ 0.61
HPS4-216ENST00000493455 USP48Q86UV5 1035 aa18.86■□□□□ 0.61
HPS4-216ENST00000493455 ZFPM1Q8IX07 1006 aa18.86■□□□□ 0.61
HPS4-216ENST00000493455 GLIS2Q9BZE0 524 aaPredicted RBP18.86■□□□□ 0.61
HPS4-216ENST00000493455 TMEM39BQ9GZU3 492 aa18.86■□□□□ 0.61
HPS4-216ENST00000493455 ANO2Q9NQ90 1003 aa18.86■□□□□ 0.61
HPS4-216ENST00000493455 KIF3CO14782 793 aa18.85■□□□□ 0.61
HPS4-216ENST00000493455 RASA3Q14644 834 aa18.85■□□□□ 0.61
HPS4-216ENST00000493455 IDI2Q9BXS1 227 aa18.85■□□□□ 0.61
HPS4-216ENST00000493455 MCM9Q9NXL9 1143 aa18.85■□□□□ 0.61
HPS4-216ENST00000493455 CNTNAP1P78357 1384 aa18.84■□□□□ 0.61
HPS4-216ENST00000493455 LAMB1P07942 1786 aa18.84■□□□□ 0.61
HPS4-216ENST00000493455 PITPNM2Q9BZ72 1349 aa18.84■□□□□ 0.61
HPS4-216ENST00000493455 GSG1L2A8MUP6 293 aa18.84■□□□□ 0.61
HPS4-216ENST00000493455 PATL2C9JE40 543 aaKnown RBP18.84■□□□□ 0.61
HPS4-216ENST00000493455 POLR3DP05423 398 aaPredicted RBP18.84■□□□□ 0.61
HPS4-216ENST00000493455 HSPD1P10809 573 aaKnown RBP18.84■□□□□ 0.61
HPS4-216ENST00000493455 STK11IPQ8N1F8 1099 aa18.84■□□□□ 0.61
HPS4-216ENST00000493455 ZC3H15Q8WU90 426 aaKnown RBP18.84■□□□□ 0.61
HPS4-216ENST00000493455 NACAP1Q9BZK3 213 aa18.84■□□□□ 0.61
HPS4-216ENST00000493455 OSBPL5Q9H0X9 879 aaPredicted RBP18.84■□□□□ 0.61
HPS4-216ENST00000493455 NAPBQ9H115 298 aa18.84■□□□□ 0.61
HPS4-216ENST00000493455 DEFB129Q9H1M3 183 aa18.84■□□□□ 0.61
HPS4-216ENST00000493455 EPB41L4AQ9HCS5 686 aaPredicted RBP18.84■□□□□ 0.61
HPS4-216ENST00000493455 DCP1AQ9NPI6 582 aaPredicted RBP18.84■□□□□ 0.61
HPS4-216ENST00000493455 PALD1Q9ULE6 856 aa18.84■□□□□ 0.61
HPS4-216ENST00000493455 DDX60LQ5H9U9 1706 aaKnown RBP18.83■□□□□ 0.61
HPS4-216ENST00000493455 PTH1RQ03431 593 aa18.83■□□□□ 0.6
HPS4-216ENST00000493455 CHADLQ6NUI6 762 aa18.83■□□□□ 0.6
HPS4-216ENST00000493455 CDAN1Q8IWY9 1227 aa18.83■□□□□ 0.6
HPS4-216ENST00000493455 IFNL3Q8IZI9 196 aa18.83■□□□□ 0.6
HPS4-216ENST00000493455 ZNF408Q9H9D4 720 aa18.83■□□□□ 0.6
HPS4-216ENST00000493455 CYP2D7A0A087X1C5 515 aa18.82■□□□□ 0.6
HPS4-216ENST00000493455 MINDY4BA8MYZ0 360 aa18.82■□□□□ 0.6
HPS4-216ENST00000493455 ENTPD3O75355 529 aa18.82■□□□□ 0.6
HPS4-216ENST00000493455 CYP2D6P10635 497 aa18.82■□□□□ 0.6
HPS4-216ENST00000493455 CDC37L1Q7L3B6 337 aa18.82■□□□□ 0.6
HPS4-216ENST00000493455 AMOTL1Q8IY63 956 aa18.82■□□□□ 0.6
HPS4-216ENST00000493455 FAM151AQ8WW52 585 aa18.82■□□□□ 0.6
HPS4-216ENST00000493455 ATP8A2Q9NTI2 1148 aa18.82■□□□□ 0.6
HPS4-216ENST00000493455 DDTLA6NHG4 134 aaPredicted RBP18.81■□□□□ 0.6
HPS4-216ENST00000493455 TRAF5O00463 557 aa18.81■□□□□ 0.6
HPS4-216ENST00000493455 FOXP2O15409 715 aa18.81■□□□□ 0.6
HPS4-216ENST00000493455 FMR1Q06787 632 aaKnown RBP eCLIP18.81■□□□□ 0.6
HPS4-216ENST00000493455 PRKG1Q13976 671 aa18.81■□□□□ 0.6
HPS4-216ENST00000493455 C8orf34Q49A92 452 aa18.81■□□□□ 0.6
HPS4-216ENST00000493455 FKBP1CQ5VVH2 108 aa18.81■□□□□ 0.6
HPS4-216ENST00000493455 FAM83AQ86UY5 434 aa18.81■□□□□ 0.6
HPS4-216ENST00000493455 CSRNP1Q96S65 589 aa18.81■□□□□ 0.6
HPS4-216ENST00000493455 PGAP2Q9UHJ9 254 aa18.81■□□□□ 0.6
HPS4-216ENST00000493455 MYH8P13535 1937 aa18.8■□□□□ 0.6
HPS4-216ENST00000493455 USP17L12C9JPN9 530 aa18.8■□□□□ 0.6
HPS4-216ENST00000493455 USP17L21D6R901 530 aa18.8■□□□□ 0.6
HPS4-216ENST00000493455 HLA-DOAP06340 250 aa18.8■□□□□ 0.6
HPS4-216ENST00000493455 HAND2P61296 217 aa18.8■□□□□ 0.6
HPS4-216ENST00000493455 EVX2Q03828 476 aa18.8■□□□□ 0.6
HPS4-216ENST00000493455 SH3BP5LQ7L8J4 393 aa18.8■□□□□ 0.6
HPS4-216ENST00000493455 CDCA5Q96FF9 252 aa18.8■□□□□ 0.6
HPS4-216ENST00000493455 TRIM34Q9BYJ4 488 aa18.8■□□□□ 0.6
HPS4-216ENST00000493455 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.8■□□□□ 0.6
HPS4-216ENST00000493455 SIPA1L1O43166 1804 aa18.79■□□□□ 0.6
HPS4-216ENST00000493455 FAM196BA6NMK8 535 aa18.79■□□□□ 0.6
HPS4-216ENST00000493455 SLURP2P0DP57 97 aa18.79■□□□□ 0.6
HPS4-216ENST00000493455 NBPF12Q5TAG4 269 aaPredicted RBP18.79■□□□□ 0.6
HPS4-216ENST00000493455 CTR9Q6PD62 1173 aa18.79■□□□□ 0.6
HPS4-216ENST00000493455 DSCC1Q9BVC3 393 aa18.79■□□□□ 0.6
HPS4-216ENST00000493455 LSG1Q9H089 658 aaKnown RBP18.79■□□□□ 0.6
HPS4-216ENST00000493455 ARPP21Q9UBL0 812 aaPredicted RBP18.79■□□□□ 0.6
HPS4-216ENST00000493455 RPAP1Q9BWH6 1393 aaPredicted RBP18.79■□□□□ 0.6
HPS4-216ENST00000493455 LAMA4Q16363 1823 aa18.79■□□□□ 0.6
HPS4-216ENST00000493455 SMIM22K7EJ46 135 aa18.78■□□□□ 0.6
HPS4-216ENST00000493455 REC8O95072 547 aa18.78■□□□□ 0.6
HPS4-216ENST00000493455 FGAP02671 866 aa18.78■□□□□ 0.6
HPS4-216ENST00000493455 MIGA2Q7L4E1 593 aa18.78■□□□□ 0.6
HPS4-216ENST00000493455 TTC6Q86TZ1 520 aa18.78■□□□□ 0.6
HPS4-216ENST00000493455 CRACR2BQ8N4Y2 399 aaPredicted RBP18.78■□□□□ 0.6
HPS4-216ENST00000493455 SMC1BQ8NDV3 1235 aa18.78■□□□□ 0.6
HPS4-216ENST00000493455 MKRN1Q9UHC7 482 aaKnown RBP18.78■□□□□ 0.6
HPS4-216ENST00000493455 FZD1Q9UP38 647 aa18.78■□□□□ 0.6
HPS4-216ENST00000493455 PPP2R3BQ9Y5P8 575 aa18.78■□□□□ 0.6
HPS4-216ENST00000493455 NPM3O75607 178 aaKnown RBP18.77■□□□□ 0.6
HPS4-216ENST00000493455 NF2P35240 595 aa18.77■□□□□ 0.6
HPS4-216ENST00000493455 PLCD1P51178 756 aa18.77■□□□□ 0.6
HPS4-216ENST00000493455 CTDSPL2Q05D32 466 aa18.77■□□□□ 0.6
HPS4-216ENST00000493455 TTLL12Q14166 644 aaPredicted RBP18.77■□□□□ 0.6
HPS4-216ENST00000493455 GIMAP6Q6P9H5 292 aa18.77■□□□□ 0.6
HPS4-216ENST00000493455 DYNLL2Q96FJ2 89 aa18.77■□□□□ 0.6
HPS4-216ENST00000493455 TEPSINQ96N21 525 aa18.77■□□□□ 0.6
HPS4-216ENST00000493455 DHX36Q9H2U1 1008 aaKnown RBP18.77■□□□□ 0.6
HPS4-216ENST00000493455 RBM8AQ9Y5S9 174 aaKnown RBP18.77■□□□□ 0.6
HPS4-216ENST00000493455 TRPM7Q96QT4 1865 aa18.77■□□□□ 0.6
HPS4-216ENST00000493455 TOMM70O94826 608 aa18.76■□□□□ 0.59
HPS4-216ENST00000493455 SEC24BO95487 1268 aa18.76■□□□□ 0.59
HPS4-216ENST00000493455 PPARAQ07869 468 aa18.76■□□□□ 0.59
HPS4-216ENST00000493455 U3KPZ7 1027 aaPredicted RBP18.76■□□□□ 0.59
HPS4-216ENST00000493455 ALX1Q15699 326 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms