RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 CDK8P49336 464 aa6.19□□□□□ -1.42
CLK1-213ENST00000492793 RPL6Q02878 288 aaKnown RBP6.19□□□□□ -1.42
CLK1-213ENST00000492793 INPP5AQ14642 412 aa6.19□□□□□ -1.42
CLK1-213ENST00000492793 SCARA3Q6AZY7 606 aa6.19□□□□□ -1.42
CLK1-213ENST00000492793 GK5Q6ZS86 529 aa6.19□□□□□ -1.42
CLK1-213ENST00000492793 KIAA1211Q6ZU35 1233 aa6.19□□□□□ -1.42
CLK1-213ENST00000492793 DYMQ7RTS9 669 aa6.19□□□□□ -1.42
CLK1-213ENST00000492793 C12orf40Q86WS4 652 aa6.19□□□□□ -1.42
CLK1-213ENST00000492793 PLPPR2Q96GM1 343 aa6.19□□□□□ -1.42
CLK1-213ENST00000492793 SPATA32Q96LK8 384 aa6.19□□□□□ -1.42
CLK1-213ENST00000492793 WDR18Q9BV38 432 aa6.19□□□□□ -1.42
CLK1-213ENST00000492793 GINM1Q9NU53 330 aa6.19□□□□□ -1.42
CLK1-213ENST00000492793 ROBO2Q9HCK4 1378 aa6.18□□□□□ -1.42
CLK1-213ENST00000492793 FAM221AA4D161 298 aa6.18□□□□□ -1.42
CLK1-213ENST00000492793 TM4SF5O14894 197 aa6.18□□□□□ -1.42
CLK1-213ENST00000492793 CILPO75339 1184 aa6.18□□□□□ -1.42
CLK1-213ENST00000492793 ATP2B1P20020 1258 aa6.18□□□□□ -1.42
CLK1-213ENST00000492793 KIF4BQ2VIQ3 1234 aa6.18□□□□□ -1.42
CLK1-213ENST00000492793 LRFN4Q6PJG9 635 aa6.18□□□□□ -1.42
CLK1-213ENST00000492793 SLC43A3Q8NBI5 491 aa6.18□□□□□ -1.42
CLK1-213ENST00000492793 DRC1Q96MC2 740 aa6.18□□□□□ -1.42
CLK1-213ENST00000492793 FERD3LQ96RJ6 166 aa6.18□□□□□ -1.42
CLK1-213ENST00000492793 AKTIPQ9H8T0 292 aa6.18□□□□□ -1.42
CLK1-213ENST00000492793 BRMS1Q9HCU9 246 aa6.18□□□□□ -1.42
CLK1-213ENST00000492793 SSU72Q9NP77 194 aaKnown RBP6.18□□□□□ -1.42
CLK1-213ENST00000492793 STK17AQ9UEE5 414 aa6.18□□□□□ -1.42
CLK1-213ENST00000492793 C9orf172C9J069 976 aa6.17□□□□□ -1.42
CLK1-213ENST00000492793 GAS2O43903 313 aaKnown RBP6.17□□□□□ -1.42
CLK1-213ENST00000492793 RNGTTO60942 597 aaKnown RBP6.17□□□□□ -1.42
CLK1-213ENST00000492793 DRD2P14416 443 aa6.17□□□□□ -1.42
CLK1-213ENST00000492793 SELPP16109 830 aa6.17□□□□□ -1.42
CLK1-213ENST00000492793 ATF4P18848 351 aaPredicted RBP6.17□□□□□ -1.42
CLK1-213ENST00000492793 COL8A1P27658 744 aa6.17□□□□□ -1.42
CLK1-213ENST00000492793 GTF2F1P35269 517 aaKnown RBP eCLIP6.17□□□□□ -1.42
CLK1-213ENST00000492793 ZNF165P49910 485 aa6.17□□□□□ -1.42
CLK1-213ENST00000492793 ETF1P62495 437 aaKnown RBP6.17□□□□□ -1.42
CLK1-213ENST00000492793 NRG1Q02297 640 aaPredicted RBP6.17□□□□□ -1.42
CLK1-213ENST00000492793 ID3Q02535 119 aa6.17□□□□□ -1.42
CLK1-213ENST00000492793 CCDC81Q6ZN84 652 aa6.17□□□□□ -1.42
CLK1-213ENST00000492793 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.17□□□□□ -1.42
CLK1-213ENST00000492793 REC114Q7Z4M0 266 aa6.17□□□□□ -1.42
CLK1-213ENST00000492793 RASGRP4Q8TDF6 673 aa6.17□□□□□ -1.42
CLK1-213ENST00000492793 TMPRSS13Q9BYE2 586 aa6.17□□□□□ -1.42
CLK1-213ENST00000492793 PIDD1Q9HB75 910 aa6.17□□□□□ -1.42
CLK1-213ENST00000492793 KCNQ5Q9NR82 932 aa6.17□□□□□ -1.42
CLK1-213ENST00000492793 F8W735 103 aaPredicted RBP6.16□□□□□ -1.42
CLK1-213ENST00000492793 IREB2P48200 963 aaKnown RBP6.16□□□□□ -1.42
CLK1-213ENST00000492793 PPM1JQ5JR12 505 aa6.16□□□□□ -1.42
CLK1-213ENST00000492793 SEC16BQ96JE7 1060 aa6.16□□□□□ -1.42
CLK1-213ENST00000492793 CRBNQ96SW2 442 aa6.16□□□□□ -1.42
CLK1-213ENST00000492793 PPP1R9AQ9ULJ8 1098 aa6.16□□□□□ -1.42
CLK1-213ENST00000492793 PCDHB14Q9Y5E9 798 aa6.16□□□□□ -1.42
CLK1-213ENST00000492793 SNCAIPQ9Y6H5 919 aa6.16□□□□□ -1.42
CLK1-213ENST00000492793 MEGF11A6BM72 1044 aa6.15□□□□□ -1.42
CLK1-213ENST00000492793 RNF225M0QZC1 329 aaPredicted RBP6.15□□□□□ -1.42
CLK1-213ENST00000492793 TMPRSS2O15393 492 aa6.15□□□□□ -1.42
CLK1-213ENST00000492793 ADH5P11766 374 aa6.15□□□□□ -1.42
CLK1-213ENST00000492793 PLCG1P19174 1290 aa6.15□□□□□ -1.42
CLK1-213ENST00000492793 ASPAP45381 313 aa6.15□□□□□ -1.42
CLK1-213ENST00000492793 USP11P51784 963 aa6.15□□□□□ -1.42
CLK1-213ENST00000492793 SOX4Q06945 474 aaPredicted RBP6.15□□□□□ -1.42
CLK1-213ENST00000492793 PDE4BQ07343 736 aa6.15□□□□□ -1.42
CLK1-213ENST00000492793 COL9A2Q14055 689 aaPredicted RBP6.15□□□□□ -1.42
CLK1-213ENST00000492793 ANKRD34AQ69YU3 496 aa6.15□□□□□ -1.42
CLK1-213ENST00000492793 CDC37L1Q7L3B6 337 aa6.15□□□□□ -1.42
CLK1-213ENST00000492793 SLITRK4Q8IW52 837 aa6.15□□□□□ -1.42
CLK1-213ENST00000492793 SMG8Q8ND04 991 aaKnown RBP6.15□□□□□ -1.42
CLK1-213ENST00000492793 DHX38Q92620 1227 aaKnown RBP6.15□□□□□ -1.42
CLK1-213ENST00000492793 LENG1Q96BZ8 264 aaPredicted RBP6.15□□□□□ -1.42
CLK1-213ENST00000492793 ANAPC16Q96DE5 110 aa6.15□□□□□ -1.42
CLK1-213ENST00000492793 CEP41Q9BYV8 373 aa6.15□□□□□ -1.42
CLK1-213ENST00000492793 PPT2Q9UMR5 302 aa6.15□□□□□ -1.42
CLK1-213ENST00000492793 HIF3AQ9Y2N7 669 aa6.15□□□□□ -1.42
CLK1-213ENST00000492793 MRVI1Q9Y6F6 885 aa6.15□□□□□ -1.42
CLK1-213ENST00000492793 STK10O94804 968 aaKnown RBP6.14□□□□□ -1.43
CLK1-213ENST00000492793 PGRP06401 933 aa6.14□□□□□ -1.43
CLK1-213ENST00000492793 HCLS1P14317 486 aaPredicted RBP6.14□□□□□ -1.43
CLK1-213ENST00000492793 RAB6AP20340 208 aa6.14□□□□□ -1.43
CLK1-213ENST00000492793 RXRBP28702 533 aa6.14□□□□□ -1.43
CLK1-213ENST00000492793 GRK4P32298 578 aa6.14□□□□□ -1.43
CLK1-213ENST00000492793 CLCQ05315 142 aa6.14□□□□□ -1.43
CLK1-213ENST00000492793 MLECQ14165 292 aa6.14□□□□□ -1.43
CLK1-213ENST00000492793 TTLL4Q14679 1199 aa6.14□□□□□ -1.43
CLK1-213ENST00000492793 ZC3H12AQ5D1E8 599 aaKnown RBP6.14□□□□□ -1.43
CLK1-213ENST00000492793 TMEM130Q8N3G9 435 aa6.14□□□□□ -1.43
CLK1-213ENST00000492793 WFDC12Q8WWY7 111 aa6.14□□□□□ -1.43
CLK1-213ENST00000492793 FANCD2OSQ96PS1 177 aa6.14□□□□□ -1.43
CLK1-213ENST00000492793 SRRTQ9BXP5 876 aaKnown RBP6.14□□□□□ -1.43
CLK1-213ENST00000492793 LRRC3Q9BY71 257 aa6.14□□□□□ -1.43
CLK1-213ENST00000492793 ATXN3LQ9H3M9 355 aa6.14□□□□□ -1.43
CLK1-213ENST00000492793 CACNA2D2Q9NY47 1150 aa6.14□□□□□ -1.43
CLK1-213ENST00000492793 CORINQ9Y5Q5 1042 aa6.14□□□□□ -1.43
CLK1-213ENST00000492793 NOS3P29474 1203 aa6.13□□□□□ -1.43
CLK1-213ENST00000492793 ERVK-24P63145 666 aa6.13□□□□□ -1.43
CLK1-213ENST00000492793 MCF2L2Q86YR7 1114 aa6.13□□□□□ -1.43
CLK1-213ENST00000492793 SUGCTQ9HAC7 445 aa6.13□□□□□ -1.43
CLK1-213ENST00000492793 CRIM1Q9NZV1 1036 aa6.13□□□□□ -1.43
CLK1-213ENST00000492793 KLHL3Q9UH77 587 aa6.13□□□□□ -1.43
CLK1-213ENST00000492793 POLR3KQ9Y2Y1 108 aaPredicted RBP6.13□□□□□ -1.43
CLK1-213ENST00000492793 R3HCC1Q9Y3T6 440 aaKnown RBP6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms