RNA–Protein interactions for RNA: ENST00000491789.1

VPS45-209, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 3

Gene VPS45, Length 976 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-209ENST00000491789 TTC13Q8NBP0 860 aa8.75□□□□□ -1.01
VPS45-209ENST00000491789 MAP4K1Q92918 833 aa8.75□□□□□ -1.01
VPS45-209ENST00000491789 CHMP4CQ96CF2 233 aa8.75□□□□□ -1.01
VPS45-209ENST00000491789 TMX3Q96JJ7 454 aa8.75□□□□□ -1.01
VPS45-209ENST00000491789 DBNDD2Q9BQY9 259 aa8.75□□□□□ -1.01
VPS45-209ENST00000491789 UTP14AQ9BVJ6 771 aaKnown RBP8.75□□□□□ -1.01
VPS45-209ENST00000491789 ALDH8A1Q9H2A2 487 aaPredicted RBP8.75□□□□□ -1.01
VPS45-209ENST00000491789 TLR7Q9NYK1 1049 aaKnown RBP8.75□□□□□ -1.01
VPS45-209ENST00000491789 TRMT112Q9UI30 125 aaKnown RBP8.75□□□□□ -1.01
VPS45-209ENST00000491789 SNX14Q9Y5W7 946 aa8.75□□□□□ -1.01
VPS45-209ENST00000491789 MROH5Q6ZUA9 1318 aa8.75□□□□□ -1.01
VPS45-209ENST00000491789 RPAP1Q9BWH6 1393 aaPredicted RBP8.74□□□□□ -1.01
VPS45-209ENST00000491789 A0A1B0GUL7 405 aa8.74□□□□□ -1.01
VPS45-209ENST00000491789 C3orf80F5H4A9 247 aa8.74□□□□□ -1.01
VPS45-209ENST00000491789 CYP2E1P05181 493 aaPredicted RBP8.74□□□□□ -1.01
VPS45-209ENST00000491789 HCLS1P14317 486 aaPredicted RBP8.74□□□□□ -1.01
VPS45-209ENST00000491789 EPS15P42566 896 aa8.74□□□□□ -1.01
VPS45-209ENST00000491789 SCNN1DP51172 638 aa8.74□□□□□ -1.01
VPS45-209ENST00000491789 MCMDC2Q4G0Z9 681 aa8.74□□□□□ -1.01
VPS45-209ENST00000491789 SWT1Q5T5J6 900 aaKnown RBP8.74□□□□□ -1.01
VPS45-209ENST00000491789 GORABQ5T7V8 394 aa8.74□□□□□ -1.01
VPS45-209ENST00000491789 ZSCAN25Q6NSZ9 544 aa8.74□□□□□ -1.01
VPS45-209ENST00000491789 JDP2Q8WYK2 163 aa8.74□□□□□ -1.01
VPS45-209ENST00000491789 TNPO1Q92973 898 aaKnown RBP8.74□□□□□ -1.01
VPS45-209ENST00000491789 PAG1Q9NWQ8 432 aa8.74□□□□□ -1.01
VPS45-209ENST00000491789 PALD1Q9ULE6 856 aa8.74□□□□□ -1.01
VPS45-209ENST00000491789 LIMCH1Q9UPQ0 1083 aa8.74□□□□□ -1.01
VPS45-209ENST00000491789 ATP6V0A2Q9Y487 856 aa8.74□□□□□ -1.01
VPS45-209ENST00000491789 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.74□□□□□ -1.01
VPS45-209ENST00000491789 CYP46A1Q9Y6A2 500 aa8.74□□□□□ -1.01
VPS45-209ENST00000491789 GJA3Q9Y6H8 435 aa8.74□□□□□ -1.01
VPS45-209ENST00000491789 TMEM88BA6NKF7 163 aa8.73□□□□□ -1.01
VPS45-209ENST00000491789 HMGB1P09429 215 aaKnown RBP8.73□□□□□ -1.01
VPS45-209ENST00000491789 IFIT1P09914 478 aaKnown RBP8.73□□□□□ -1.01
VPS45-209ENST00000491789 UQCRFS1P1P0C7P4 283 aa8.73□□□□□ -1.01
VPS45-209ENST00000491789 VEGFBP49765 207 aa8.73□□□□□ -1.01
VPS45-209ENST00000491789 EIF6P56537 245 aaKnown RBP8.73□□□□□ -1.01
VPS45-209ENST00000491789 NECTIN1Q15223 517 aa8.73□□□□□ -1.01
VPS45-209ENST00000491789 TTF1Q15361 905 aaPredicted RBP8.73□□□□□ -1.01
VPS45-209ENST00000491789 ATP2B3Q16720 1220 aa8.73□□□□□ -1.01
VPS45-209ENST00000491789 AOC3Q16853 763 aa8.73□□□□□ -1.01
VPS45-209ENST00000491789 CCDC152Q4G0S7 254 aa8.73□□□□□ -1.01
VPS45-209ENST00000491789 TTC39AQ5SRH9 613 aa8.73□□□□□ -1.01
VPS45-209ENST00000491789 PNMA8AQ86V59 439 aaPredicted RBP8.73□□□□□ -1.01
VPS45-209ENST00000491789 SP8Q8IXZ3 490 aa8.73□□□□□ -1.01
VPS45-209ENST00000491789 LARGE2Q8N3Y3 721 aa8.73□□□□□ -1.01
VPS45-209ENST00000491789 TTLL11Q8NHH1 800 aa8.73□□□□□ -1.01
VPS45-209ENST00000491789 JARID2Q92833 1246 aaPredicted RBP8.73□□□□□ -1.01
VPS45-209ENST00000491789 FAM89AQ96GI7 184 aa8.73□□□□□ -1.01
VPS45-209ENST00000491789 TTC14Q96N46 770 aa8.73□□□□□ -1.01
VPS45-209ENST00000491789 NEUROD6Q96NK8 337 aa8.73□□□□□ -1.01
VPS45-209ENST00000491789 DSCC1Q9BVC3 393 aa8.73□□□□□ -1.01
VPS45-209ENST00000491789 RTFDC1Q9BY42 306 aaPredicted RBP8.73□□□□□ -1.01
VPS45-209ENST00000491789 RBM8AQ9Y5S9 174 aaKnown RBP8.73□□□□□ -1.01
VPS45-209ENST00000491789 LRRC37AA6NMS7 1700 aa8.73□□□□□ -1.01
VPS45-209ENST00000491789 CNTNAP1P78357 1384 aa8.73□□□□□ -1.01
VPS45-209ENST00000491789 ARAP2Q8WZ64 1704 aa8.72□□□□□ -1.01
VPS45-209ENST00000491789 A0A0D9SFI3 127 aa8.72□□□□□ -1.01
VPS45-209ENST00000491789 BBOX1O75936 387 aa8.72□□□□□ -1.01
VPS45-209ENST00000491789 ITGA6P23229 1130 aa8.72□□□□□ -1.01
VPS45-209ENST00000491789 CXCL9Q07325 125 aa8.72□□□□□ -1.01
VPS45-209ENST00000491789 GRIPAP1Q4V328 841 aa8.72□□□□□ -1.01
VPS45-209ENST00000491789 LRRC24Q50LG9 513 aa8.72□□□□□ -1.01
VPS45-209ENST00000491789 METTL24Q5JXM2 366 aa8.72□□□□□ -1.01
VPS45-209ENST00000491789 L1TD1Q5T7N2 865 aaKnown RBP8.72□□□□□ -1.01
VPS45-209ENST00000491789 CREB3L3Q68CJ9 461 aa8.72□□□□□ -1.01
VPS45-209ENST00000491789 LDHAL6AQ6ZMR3 332 aa8.72□□□□□ -1.01
VPS45-209ENST00000491789 DNAJC2Q99543 621 aaKnown RBP8.72□□□□□ -1.01
VPS45-209ENST00000491789 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.72□□□□□ -1.01
VPS45-209ENST00000491789 IL25Q9H293 177 aa8.72□□□□□ -1.01
VPS45-209ENST00000491789 CNNM1Q9NRU3 951 aa8.72□□□□□ -1.01
VPS45-209ENST00000491789 PDRG1Q9NUG6 133 aa8.72□□□□□ -1.01
VPS45-209ENST00000491789 DUOX1Q9NRD9 1551 aa8.72□□□□□ -1.01
VPS45-209ENST00000491789 WDR33Q9C0J8 1336 aaKnown RBP8.72□□□□□ -1.01
VPS45-209ENST00000491789 TULP1O00294 542 aaPredicted RBP8.71□□□□□ -1.02
VPS45-209ENST00000491789 SLC27A2O14975 620 aa8.71□□□□□ -1.02
VPS45-209ENST00000491789 FOXN1O15353 648 aa8.71□□□□□ -1.02
VPS45-209ENST00000491789 RNF113AO15541 343 aaKnown RBP8.71□□□□□ -1.02
VPS45-209ENST00000491789 PPIP5K2O43314 1243 aa8.71□□□□□ -1.02
VPS45-209ENST00000491789 TAF5LO75529 589 aa8.71□□□□□ -1.02
VPS45-209ENST00000491789 PDE8BO95263 885 aa8.71□□□□□ -1.02
VPS45-209ENST00000491789 CASTP20810 708 aaKnown RBP8.71□□□□□ -1.02
VPS45-209ENST00000491789 DNAJB2P25686 324 aa8.71□□□□□ -1.02
VPS45-209ENST00000491789 PTH1RQ03431 593 aa8.71□□□□□ -1.02
VPS45-209ENST00000491789 PUM3Q15397 648 aaKnown RBP8.71□□□□□ -1.02
VPS45-209ENST00000491789 ZMYM1Q5SVZ6 1142 aa8.71□□□□□ -1.02
VPS45-209ENST00000491789 BLOC1S2Q6QNY1 142 aa8.71□□□□□ -1.02
VPS45-209ENST00000491789 RUFY3Q7L099 469 aa8.71□□□□□ -1.02
VPS45-209ENST00000491789 TNS4Q8IZW8 715 aa8.71□□□□□ -1.02
VPS45-209ENST00000491789 MPNDQ8N594 471 aa8.71□□□□□ -1.02
VPS45-209ENST00000491789 CELF1Q92879 486 aaKnown RBP8.71□□□□□ -1.02
VPS45-209ENST00000491789 XAGE2Q96GT9 111 aa8.71□□□□□ -1.02
VPS45-209ENST00000491789 FAM227BQ96M60 508 aa8.71□□□□□ -1.02
VPS45-209ENST00000491789 JAKMIP1Q96N16 626 aaKnown RBP8.71□□□□□ -1.02
VPS45-209ENST00000491789 CDC5LQ99459 802 aaKnown RBP8.71□□□□□ -1.02
VPS45-209ENST00000491789 PRR14Q9BWN1 585 aa8.71□□□□□ -1.02
VPS45-209ENST00000491789 VPS33BQ9H267 617 aa8.71□□□□□ -1.02
VPS45-209ENST00000491789 CTNNA3Q9UI47 895 aa8.71□□□□□ -1.02
VPS45-209ENST00000491789 RIPOR2Q9Y4F9 1068 aa8.71□□□□□ -1.02
VPS45-209ENST00000491789 ATP6V1DQ9Y5K8 247 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms