RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 INPP5BP32019 993 aa30.62■■■□□ 2.49
HMGN1-217ENST00000489072 AACSQ86V21 672 aa30.62■■■□□ 2.49
HMGN1-217ENST00000489072 OTUD5Q96G74 571 aa30.62■■■□□ 2.49
HMGN1-217ENST00000489072 PTPN18Q99952 460 aa30.62■■■□□ 2.49
HMGN1-217ENST00000489072 ZNF112Q9UJU3 913 aa30.62■■■□□ 2.49
HMGN1-217ENST00000489072 HMMRO75330 724 aa30.61■■■□□ 2.49
HMGN1-217ENST00000489072 ALDH1A1P00352 501 aa30.61■■■□□ 2.49
HMGN1-217ENST00000489072 ZNF296Q8WUU4 475 aaPredicted RBP30.61■■■□□ 2.49
HMGN1-217ENST00000489072 GPR25O00155 361 aa30.6■■■□□ 2.49
HMGN1-217ENST00000489072 PICALMQ13492 652 aa30.6■■■□□ 2.49
HMGN1-217ENST00000489072 PIH1D3Q9NQM4 214 aaKnown RBP30.6■■■□□ 2.49
HMGN1-217ENST00000489072 DDTLA6NHG4 134 aaPredicted RBP30.59■■■□□ 2.49
HMGN1-217ENST00000489072 APBB1O00213 710 aa30.59■■■□□ 2.49
HMGN1-217ENST00000489072 NOM1Q5C9Z4 860 aaKnown RBP30.59■■■□□ 2.49
HMGN1-217ENST00000489072 ERO1BQ86YB8 467 aa30.59■■■□□ 2.49
HMGN1-217ENST00000489072 BRI3BPQ8WY22 251 aa30.58■■■□□ 2.49
HMGN1-217ENST00000489072 NDUFB9Q9Y6M9 179 aa30.58■■■□□ 2.49
HMGN1-217ENST00000489072 NAA16Q6N069 864 aaPredicted RBP30.57■■■□□ 2.48
HMGN1-217ENST00000489072 KIF1BPQ96EK5 621 aa30.57■■■□□ 2.48
HMGN1-217ENST00000489072 CDK5RAP2Q96SN8 1893 aa30.57■■■□□ 2.48
HMGN1-217ENST00000489072 SLURP2P0DP57 97 aa30.56■■■□□ 2.48
HMGN1-217ENST00000489072 GTF2A2P52657 109 aa30.56■■■□□ 2.48
HMGN1-217ENST00000489072 ADGRA1Q86SQ6 560 aa30.56■■■□□ 2.48
HMGN1-217ENST00000489072 ZSCAN29Q8IWY8 852 aaPredicted RBP30.56■■■□□ 2.48
HMGN1-217ENST00000489072 CCL15-CCL14A0A0B4J2E2 113 aa30.55■■■□□ 2.48
HMGN1-217ENST00000489072 NPM3O75607 178 aaKnown RBP30.55■■■□□ 2.48
HMGN1-217ENST00000489072 MAP4K4O95819 1239 aaPredicted RBP30.55■■■□□ 2.48
HMGN1-217ENST00000489072 CCL15Q16663 113 aa30.55■■■□□ 2.48
HMGN1-217ENST00000489072 CTU1Q7Z7A3 348 aaKnown RBP30.55■■■□□ 2.48
HMGN1-217ENST00000489072 PHF20L1A8MW92 1017 aa30.54■■■□□ 2.48
HMGN1-217ENST00000489072 IRF6O14896 467 aa30.54■■■□□ 2.48
HMGN1-217ENST00000489072 PPIL2Q13356 520 aa30.54■■■□□ 2.48
HMGN1-217ENST00000489072 NOL9Q5SY16 702 aaKnown RBP30.54■■■□□ 2.48
HMGN1-217ENST00000489072 OTUD7BQ6GQQ9 843 aa30.54■■■□□ 2.48
HMGN1-217ENST00000489072 SH3RF3Q8TEJ3 882 aaPredicted RBP30.54■■■□□ 2.48
HMGN1-217ENST00000489072 RAB11FIP3O75154 756 aa30.53■■■□□ 2.48
HMGN1-217ENST00000489072 MAP3K10Q02779 954 aa30.53■■■□□ 2.48
HMGN1-217ENST00000489072 CRHR2Q13324 411 aa30.53■■■□□ 2.48
HMGN1-217ENST00000489072 TEX11Q8IYF3 940 aa30.53■■■□□ 2.48
HMGN1-217ENST00000489072 CLASRPQ8N2M8 674 aaKnown RBP30.53■■■□□ 2.48
HMGN1-217ENST00000489072 AATFQ9NY61 560 aaKnown RBP eCLIP30.53■■■□□ 2.48
HMGN1-217ENST00000489072 FKTNO75072 461 aa30.52■■■□□ 2.48
HMGN1-217ENST00000489072 PPATQ06203 517 aa30.52■■■□□ 2.48
HMGN1-217ENST00000489072 YTHDC1Q96MU7 727 aaKnown RBP30.52■■■□□ 2.48
HMGN1-217ENST00000489072 ANTXR1Q9H6X2 564 aa30.52■■■□□ 2.48
HMGN1-217ENST00000489072 FOCADQ5VW36 1801 aa30.52■■■□□ 2.48
HMGN1-217ENST00000489072 COL2A1P02458 1487 aaPredicted RBP30.51■■■□□ 2.48
HMGN1-217ENST00000489072 IGSF3O75054 1194 aa30.51■■■□□ 2.47
HMGN1-217ENST00000489072 PPP4CP60510 307 aa30.51■■■□□ 2.47
HMGN1-217ENST00000489072 FAM43AQ8N2R8 423 aa30.51■■■□□ 2.47
HMGN1-217ENST00000489072 NOL10Q9BSC4 688 aaKnown RBP30.51■■■□□ 2.47
HMGN1-217ENST00000489072 OSBPL5Q9H0X9 879 aaPredicted RBP30.51■■■□□ 2.47
HMGN1-217ENST00000489072 SNAPC2Q13487 334 aa30.5■■■□□ 2.47
HMGN1-217ENST00000489072 BCL11AQ9H165 835 aa30.5■■■□□ 2.47
HMGN1-217ENST00000489072 DOCK1Q14185 1865 aa30.49■■■□□ 2.47
HMGN1-217ENST00000489072 IDH1O75874 414 aaKnown RBP30.49■■■□□ 2.47
HMGN1-217ENST00000489072 BAG3O95817 575 aa30.49■■■□□ 2.47
HMGN1-217ENST00000489072 CETPP11597 493 aa30.49■■■□□ 2.47
HMGN1-217ENST00000489072 SIPA1L1O43166 1804 aa30.48■■■□□ 2.47
HMGN1-217ENST00000489072 CCDC85CA6NKD9 419 aa30.48■■■□□ 2.47
HMGN1-217ENST00000489072 IFIT2P09913 472 aaKnown RBP30.48■■■□□ 2.47
HMGN1-217ENST00000489072 CYP7A1P22680 504 aa30.48■■■□□ 2.47
HMGN1-217ENST00000489072 KCNH4Q9UQ05 1017 aa30.47■■■□□ 2.47
HMGN1-217ENST00000489072 PHIPQ8WWQ0 1821 aa30.46■■■□□ 2.47
HMGN1-217ENST00000489072 FAM196BA6NMK8 535 aa30.46■■■□□ 2.47
HMGN1-217ENST00000489072 BTBD19C9JJ37 291 aa30.46■■■□□ 2.47
HMGN1-217ENST00000489072 TBC1D12O60347 775 aa30.46■■■□□ 2.47
HMGN1-217ENST00000489072 PLCG2P16885 1265 aa30.46■■■□□ 2.47
HMGN1-217ENST00000489072 DYNLL1P63167 89 aaKnown RBP30.46■■■□□ 2.47
HMGN1-217ENST00000489072 SCYL3Q8IZE3 742 aa30.46■■■□□ 2.47
HMGN1-217ENST00000489072 RRP1P56182 461 aaKnown RBP30.45■■■□□ 2.47
HMGN1-217ENST00000489072 TAF1CQ15572 869 aaPredicted RBP30.45■■■□□ 2.47
HMGN1-217ENST00000489072 MAGEB6Q8N7X4 407 aa30.45■■■□□ 2.47
HMGN1-217ENST00000489072 TGFBRAP1Q8WUH2 860 aa30.45■■■□□ 2.47
HMGN1-217ENST00000489072 MAPKAPK5Q8IW41 473 aa30.44■■■□□ 2.46
HMGN1-217ENST00000489072 PPIL4Q8WUA2 492 aaKnown RBP eCLIP30.44■■■□□ 2.46
HMGN1-217ENST00000489072 FLT1P17948 1338 aa30.44■■■□□ 2.46
HMGN1-217ENST00000489072 PTPRAP18433 802 aa30.43■■■□□ 2.46
HMGN1-217ENST00000489072 MAP3K12Q12852 859 aa30.43■■■□□ 2.46
HMGN1-217ENST00000489072 MOGSQ13724 837 aa30.43■■■□□ 2.46
HMGN1-217ENST00000489072 MIGA1Q8NAN2 632 aa30.43■■■□□ 2.46
HMGN1-217ENST00000489072 XPO5Q9HAV4 1204 aaKnown RBP eCLIP30.43■■■□□ 2.46
HMGN1-217ENST00000489072 PTPRFP10586 1907 aa30.43■■■□□ 2.46
HMGN1-217ENST00000489072 CTNND1O60716 968 aaKnown RBP30.42■■■□□ 2.46
HMGN1-217ENST00000489072 LRRCC1Q9C099 1032 aa30.42■■■□□ 2.46
HMGN1-217ENST00000489072 ZFYVE28Q9HCC9 887 aa30.42■■■□□ 2.46
HMGN1-217ENST00000489072 PICK1Q9NRD5 415 aa30.42■■■□□ 2.46
HMGN1-217ENST00000489072 FRMD4AQ9P2Q2 1039 aaPredicted RBP30.42■■■□□ 2.46
HMGN1-217ENST00000489072 ATAD5Q96QE3 1844 aa30.42■■■□□ 2.46
HMGN1-217ENST00000489072 SMARCA5O60264 1052 aaPredicted RBP30.41■■■□□ 2.46
HMGN1-217ENST00000489072 PKN2Q16513 984 aaKnown RBP30.41■■■□□ 2.46
HMGN1-217ENST00000489072 DNAJC2Q99543 621 aaKnown RBP30.41■■■□□ 2.46
HMGN1-217ENST00000489072 ZCCHC17Q9NP64 241 aaKnown RBP30.41■■■□□ 2.46
HMGN1-217ENST00000489072 ZHX2Q9Y6X8 837 aa30.41■■■□□ 2.46
HMGN1-217ENST00000489072 MYH1P12882 1939 aa30.4■■■□□ 2.46
HMGN1-217ENST00000489072 HTTP42858 3142 aa30.4■■■□□ 2.46
HMGN1-217ENST00000489072 TTF1Q15361 905 aaPredicted RBP30.4■■■□□ 2.46
HMGN1-217ENST00000489072 CD99L2Q8TCZ2 262 aa30.4■■■□□ 2.46
HMGN1-217ENST00000489072 EDC3Q96F86 508 aaKnown RBP30.4■■■□□ 2.46
HMGN1-217ENST00000489072 GOLIM4O00461 696 aa30.39■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms