RNA–Protein interactions for RNA: ENST00000488910.1

ATG3-205, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 681 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-205ENST00000488910 ABHD8Q96I13 439 aa21.37■■□□□ 1.01
ATG3-205ENST00000488910 MS4A4AQ96JQ5 239 aa21.37■■□□□ 1.01
ATG3-205ENST00000488910 NOL10Q9BSC4 688 aaKnown RBP21.37■■□□□ 1.01
ATG3-205ENST00000488910 SNCAIPQ9Y6H5 919 aa21.37■■□□□ 1.01
ATG3-205ENST00000488910 GPR25O00155 361 aa21.36■■□□□ 1.01
ATG3-205ENST00000488910 BAG3O95817 575 aa21.36■■□□□ 1.01
ATG3-205ENST00000488910 DGKZQ13574 1117 aa21.36■■□□□ 1.01
ATG3-205ENST00000488910 ZSCAN29Q8IWY8 852 aaPredicted RBP21.36■■□□□ 1.01
ATG3-205ENST00000488910 CNKSR2Q8WXI2 1034 aa21.36■■□□□ 1.01
ATG3-205ENST00000488910 IL1RAPL2Q9NP60 686 aa21.36■■□□□ 1.01
ATG3-205ENST00000488910 IGF2BP3O00425 579 aaKnown RBP eCLIP21.35■■□□□ 1.01
ATG3-205ENST00000488910 MAP3K10Q02779 954 aa21.35■■□□□ 1.01
ATG3-205ENST00000488910 OTUD5Q96G74 571 aa21.35■■□□□ 1.01
ATG3-205ENST00000488910 MCOLN1Q9GZU1 580 aa21.35■■□□□ 1.01
ATG3-205ENST00000488910 DDX4Q9NQI0 724 aaKnown RBP21.35■■□□□ 1.01
ATG3-205ENST00000488910 PLCG2P16885 1265 aa21.34■■□□□ 1.01
ATG3-205ENST00000488910 INPP5BP32019 993 aa21.34■■□□□ 1.01
ATG3-205ENST00000488910 PPP4CP60510 307 aa21.34■■□□□ 1.01
ATG3-205ENST00000488910 PPATQ06203 517 aa21.34■■□□□ 1.01
ATG3-205ENST00000488910 PICALMQ13492 652 aa21.34■■□□□ 1.01
ATG3-205ENST00000488910 TMED8Q6PL24 325 aaPredicted RBP21.34■■□□□ 1.01
ATG3-205ENST00000488910 SH3BP5LQ7L8J4 393 aa21.34■■□□□ 1.01
ATG3-205ENST00000488910 ZNF296Q8WUU4 475 aaPredicted RBP21.34■■□□□ 1.01
ATG3-205ENST00000488910 PTPN18Q99952 460 aa21.34■■□□□ 1.01
ATG3-205ENST00000488910 DDTLA6NHG4 134 aaPredicted RBP21.33■■□□□ 1.01
ATG3-205ENST00000488910 APBB1O00213 710 aa21.33■■□□□ 1.01
ATG3-205ENST00000488910 IFIT2P09913 472 aaKnown RBP21.33■■□□□ 1.01
ATG3-205ENST00000488910 PPIL2Q13356 520 aa21.33■■□□□ 1.01
ATG3-205ENST00000488910 NOL9Q5SY16 702 aaKnown RBP21.33■■□□□ 1.01
ATG3-205ENST00000488910 CTU1Q7Z7A3 348 aaKnown RBP21.33■■□□□ 1.01
ATG3-205ENST00000488910 PIH1D3Q9NQM4 214 aaKnown RBP21.33■■□□□ 1.01
ATG3-205ENST00000488910 ATRNL1Q5VV63 1379 aa21.33■■□□□ 1
ATG3-205ENST00000488910 CCL15-CCL14A0A0B4J2E2 113 aa21.32■■□□□ 1
ATG3-205ENST00000488910 FKTNO75072 461 aa21.32■■□□□ 1
ATG3-205ENST00000488910 CETPP11597 493 aa21.32■■□□□ 1
ATG3-205ENST00000488910 SNAPC2Q13487 334 aa21.32■■□□□ 1
ATG3-205ENST00000488910 CCL15Q16663 113 aa21.32■■□□□ 1
ATG3-205ENST00000488910 TEX11Q8IYF3 940 aa21.32■■□□□ 1
ATG3-205ENST00000488910 BRI3BPQ8WY22 251 aa21.32■■□□□ 1
ATG3-205ENST00000488910 R3HDMLQ9H3Y0 253 aa21.32■■□□□ 1
ATG3-205ENST00000488910 PHF20L1A8MW92 1017 aa21.31■■□□□ 1
ATG3-205ENST00000488910 IRF6O14896 467 aa21.31■■□□□ 1
ATG3-205ENST00000488910 TBC1D12O60347 775 aa21.31■■□□□ 1
ATG3-205ENST00000488910 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.31■■□□□ 1
ATG3-205ENST00000488910 AATFQ9NY61 560 aaKnown RBP eCLIP21.31■■□□□ 1
ATG3-205ENST00000488910 MAP3K12Q12852 859 aa21.3■■□□□ 1
ATG3-205ENST00000488910 TTF1Q15361 905 aaPredicted RBP21.3■■□□□ 1
ATG3-205ENST00000488910 PKN2Q16513 984 aaKnown RBP21.3■■□□□ 1
ATG3-205ENST00000488910 CERS3Q8IU89 383 aa21.3■■□□□ 1
ATG3-205ENST00000488910 SH3RF3Q8TEJ3 882 aaPredicted RBP21.3■■□□□ 1
ATG3-205ENST00000488910 OSBPL5Q9H0X9 879 aaPredicted RBP21.3■■□□□ 1
ATG3-205ENST00000488910 COL2A1P02458 1487 aaPredicted RBP21.3■■□□□ 1
ATG3-205ENST00000488910 DOCK2Q92608 1830 aa21.29■■□□□ 1
ATG3-205ENST00000488910 MYO5AQ9Y4I1 1855 aaKnown RBP21.29■■□□□ 1
ATG3-205ENST00000488910 MAST2Q6P0Q8 1798 aa21.29■■□□□ 1
ATG3-205ENST00000488910 IDH1O75874 414 aaKnown RBP21.29■■□□□ 1
ATG3-205ENST00000488910 CYP7A1P22680 504 aa21.29■■□□□ 1
ATG3-205ENST00000488910 ZCCHC17Q9NP64 241 aaKnown RBP21.29■■□□□ 1
ATG3-205ENST00000488910 CTNND1O60716 968 aaKnown RBP21.28■■□□□ 1
ATG3-205ENST00000488910 CRHR2Q13324 411 aa21.28■■□□□ 1
ATG3-205ENST00000488910 ADGRA1Q86SQ6 560 aa21.28■■□□□ 1
ATG3-205ENST00000488910 SCYL3Q8IZE3 742 aa21.28■■□□□ 1
ATG3-205ENST00000488910 DHX36Q9H2U1 1008 aaKnown RBP21.28■■□□□ 1
ATG3-205ENST00000488910 PICK1Q9NRD5 415 aa21.28■■□□□ 1
ATG3-205ENST00000488910 KCNH4Q9UQ05 1017 aa21.28■■□□□ 1
ATG3-205ENST00000488910 RRP1P56182 461 aaKnown RBP21.27■■□□□ 1
ATG3-205ENST00000488910 YTHDC1Q96MU7 727 aaKnown RBP21.27■■□□□ 1
ATG3-205ENST00000488910 LRRCC1Q9C099 1032 aa21.27■■□□□ 1
ATG3-205ENST00000488910 ANTXR1Q9H6X2 564 aa21.27■■□□□ 1
ATG3-205ENST00000488910 ZFYVE28Q9HCC9 887 aa21.27■■□□□ 1
ATG3-205ENST00000488910 NDUFB9Q9Y6M9 179 aa21.27■■□□□ 1
ATG3-205ENST00000488910 CCDC85CA6NKD9 419 aa21.26■□□□□ 0.99
ATG3-205ENST00000488910 CXCL11O14625 94 aa21.26■□□□□ 0.99
ATG3-205ENST00000488910 FAM43AQ8N2R8 423 aa21.26■□□□□ 0.99
ATG3-205ENST00000488910 MAGEB6Q8N7X4 407 aa21.26■□□□□ 0.99
ATG3-205ENST00000488910 TGFBRAP1Q8WUH2 860 aa21.26■□□□□ 0.99
ATG3-205ENST00000488910 DCTPP1Q9H773 170 aa21.26■□□□□ 0.99
ATG3-205ENST00000488910 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.26■□□□□ 0.99
ATG3-205ENST00000488910 PI4KBQ9UBF8 816 aa21.26■□□□□ 0.99
ATG3-205ENST00000488910 BTBD19C9JJ37 291 aa21.25■□□□□ 0.99
ATG3-205ENST00000488910 PTPRAP18433 802 aa21.25■□□□□ 0.99
ATG3-205ENST00000488910 TAF1CQ15572 869 aaPredicted RBP21.25■□□□□ 0.99
ATG3-205ENST00000488910 HERC5Q9UII4 1024 aaKnown RBP21.25■□□□□ 0.99
ATG3-205ENST00000488910 ATP5JP18859 108 aa21.24■□□□□ 0.99
ATG3-205ENST00000488910 ERO1AQ96HE7 468 aa21.24■□□□□ 0.99
ATG3-205ENST00000488910 BCL11AQ9H165 835 aa21.24■□□□□ 0.99
ATG3-205ENST00000488910 ZHX2Q9Y6X8 837 aa21.24■□□□□ 0.99
ATG3-205ENST00000488910 DYNLL1P63167 89 aaKnown RBP21.23■□□□□ 0.99
ATG3-205ENST00000488910 SP3Q02447 781 aa21.23■□□□□ 0.99
ATG3-205ENST00000488910 ANKRD23Q86SG2 305 aa21.23■□□□□ 0.99
ATG3-205ENST00000488910 FOXP4Q8IVH2 680 aaPredicted RBP21.23■□□□□ 0.99
ATG3-205ENST00000488910 MAPKAPK5Q8IW41 473 aa21.23■□□□□ 0.99
ATG3-205ENST00000488910 FLT1P17948 1338 aa21.23■□□□□ 0.99
ATG3-205ENST00000488910 GOLIM4O00461 696 aa21.22■□□□□ 0.99
ATG3-205ENST00000488910 SLURP2P0DP57 97 aa21.22■□□□□ 0.99
ATG3-205ENST00000488910 DNAJC2Q99543 621 aaKnown RBP21.22■□□□□ 0.99
ATG3-205ENST00000488910 AFG3L2Q9Y4W6 797 aa21.22■□□□□ 0.99
ATG3-205ENST00000488910 TLR2O60603 784 aa21.21■□□□□ 0.99
ATG3-205ENST00000488910 SLC9C2Q5TAH2 1124 aa21.21■□□□□ 0.99
ATG3-205ENST00000488910 FBXO46Q6PJ61 603 aaPredicted RBP21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms