RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 SEPT6Q14141 434 aa6.72□□□□□ -1.33
SSR1-209ENST00000488834 MAP7Q14244 749 aa6.72□□□□□ -1.33
SSR1-209ENST00000488834 PRSS36Q5K4E3 855 aa6.72□□□□□ -1.33
SSR1-209ENST00000488834 RASIP1Q5U651 963 aa6.72□□□□□ -1.33
SSR1-209ENST00000488834 AGMOQ6ZNB7 445 aa6.72□□□□□ -1.33
SSR1-209ENST00000488834 TRIM42Q8IWZ5 723 aa6.72□□□□□ -1.33
SSR1-209ENST00000488834 JARID2Q92833 1246 aaPredicted RBP6.72□□□□□ -1.33
SSR1-209ENST00000488834 FANCD2OSQ96PS1 177 aa6.72□□□□□ -1.33
SSR1-209ENST00000488834 BACH2Q9BYV9 841 aa6.72□□□□□ -1.33
SSR1-209ENST00000488834 C7orf69Q9H7B7 122 aa6.72□□□□□ -1.33
SSR1-209ENST00000488834 CRIM1Q9NZV1 1036 aa6.72□□□□□ -1.33
SSR1-209ENST00000488834 TLR6Q9Y2C9 796 aa6.72□□□□□ -1.33
SSR1-209ENST00000488834 CSADQ9Y600 493 aa6.72□□□□□ -1.33
SSR1-209ENST00000488834 MINDY4BA8MYZ0 360 aa6.71□□□□□ -1.34
SSR1-209ENST00000488834 GSC2O15499 205 aa6.71□□□□□ -1.34
SSR1-209ENST00000488834 NFICP08651 508 aa6.71□□□□□ -1.34
SSR1-209ENST00000488834 HCLS1P14317 486 aaPredicted RBP6.71□□□□□ -1.34
SSR1-209ENST00000488834 ZC3H12AQ5D1E8 599 aaKnown RBP6.71□□□□□ -1.34
SSR1-209ENST00000488834 HDXQ7Z353 690 aa6.71□□□□□ -1.34
SSR1-209ENST00000488834 Q8N3U1 123 aa6.71□□□□□ -1.34
SSR1-209ENST00000488834 FAM83CQ9BQN1 747 aa6.71□□□□□ -1.34
SSR1-209ENST00000488834 LGR6Q9HBX8 967 aa6.71□□□□□ -1.34
SSR1-209ENST00000488834 PCDHB5Q9Y5E4 795 aa6.71□□□□□ -1.34
SSR1-209ENST00000488834 PRAMEF27A3QJZ7 478 aa6.7□□□□□ -1.34
SSR1-209ENST00000488834 BPNT1O95861 308 aa6.7□□□□□ -1.34
SSR1-209ENST00000488834 FSTP19883 344 aa6.7□□□□□ -1.34
SSR1-209ENST00000488834 ZNF76P36508 570 aa6.7□□□□□ -1.34
SSR1-209ENST00000488834 TTLL4Q14679 1199 aa6.7□□□□□ -1.34
SSR1-209ENST00000488834 SNAP47Q5SQN1 464 aa6.7□□□□□ -1.34
SSR1-209ENST00000488834 CDC37L1Q7L3B6 337 aa6.7□□□□□ -1.34
SSR1-209ENST00000488834 C12orf40Q86WS4 652 aa6.7□□□□□ -1.34
SSR1-209ENST00000488834 GIMAP7Q8NHV1 300 aa6.7□□□□□ -1.34
SSR1-209ENST00000488834 TMEM74Q96NL1 305 aa6.7□□□□□ -1.34
SSR1-209ENST00000488834 TFE3P19532 575 aaPredicted RBP6.69□□□□□ -1.34
SSR1-209ENST00000488834 ERVK-24P63145 666 aa6.69□□□□□ -1.34
SSR1-209ENST00000488834 NFIAQ12857 509 aa6.69□□□□□ -1.34
SSR1-209ENST00000488834 WIPI1Q5MNZ9 446 aaPredicted RBP6.69□□□□□ -1.34
SSR1-209ENST00000488834 SMYD4Q8IYR2 804 aaPredicted RBP6.69□□□□□ -1.34
SSR1-209ENST00000488834 FBXL6Q8N531 539 aa6.69□□□□□ -1.34
SSR1-209ENST00000488834 PHC3Q8NDX5 983 aa6.69□□□□□ -1.34
SSR1-209ENST00000488834 RSRP1Q9BUV0 290 aa6.69□□□□□ -1.34
SSR1-209ENST00000488834 SEMA6CQ9H3T2 930 aa6.69□□□□□ -1.34
SSR1-209ENST00000488834 ACSS3Q9H6R3 686 aa6.69□□□□□ -1.34
SSR1-209ENST00000488834 DISC1Q9NRI5 854 aa6.69□□□□□ -1.34
SSR1-209ENST00000488834 KBTBD4Q9NVX7 518 aa6.69□□□□□ -1.34
SSR1-209ENST00000488834 PCDHGC5Q9Y5F6 944 aa6.69□□□□□ -1.34
SSR1-209ENST00000488834 IGLV1-40P01703 118 aa6.68□□□□□ -1.34
SSR1-209ENST00000488834 PF4P02776 101 aa6.68□□□□□ -1.34
SSR1-209ENST00000488834 RBM25P49756 843 aaKnown RBP6.68□□□□□ -1.34
SSR1-209ENST00000488834 ETF1P62495 437 aaKnown RBP6.68□□□□□ -1.34
SSR1-209ENST00000488834 FAM160A1Q05DH4 1040 aa6.68□□□□□ -1.34
SSR1-209ENST00000488834 PTPN11Q06124 597 aaPredicted RBP6.68□□□□□ -1.34
SSR1-209ENST00000488834 CAMK2GQ13555 558 aaPredicted RBP6.68□□□□□ -1.34
SSR1-209ENST00000488834 PPM1JQ5JR12 505 aa6.68□□□□□ -1.34
SSR1-209ENST00000488834 RNF43Q68DV7 783 aa6.68□□□□□ -1.34
SSR1-209ENST00000488834 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.68□□□□□ -1.34
SSR1-209ENST00000488834 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.68□□□□□ -1.34
SSR1-209ENST00000488834 RNF214Q8ND24 703 aa6.68□□□□□ -1.34
SSR1-209ENST00000488834 GAL3ST3Q96A11 431 aa6.68□□□□□ -1.34
SSR1-209ENST00000488834 PLPPR2Q96GM1 343 aa6.68□□□□□ -1.34
SSR1-209ENST00000488834 MFSD14AQ96MC6 490 aa6.68□□□□□ -1.34
SSR1-209ENST00000488834 TBC1D32Q96NH3 1257 aa6.68□□□□□ -1.34
SSR1-209ENST00000488834 DBNDD2Q9BQY9 259 aa6.68□□□□□ -1.34
SSR1-209ENST00000488834 CACNA2D2Q9NY47 1150 aa6.68□□□□□ -1.34
SSR1-209ENST00000488834 SCAMP3O14828 347 aaKnown RBP6.67□□□□□ -1.34
SSR1-209ENST00000488834 VAMP1P23763 118 aa6.67□□□□□ -1.34
SSR1-209ENST00000488834 LMNB2Q03252 620 aa6.67□□□□□ -1.34
SSR1-209ENST00000488834 INPP5AQ14642 412 aa6.67□□□□□ -1.34
SSR1-209ENST00000488834 LRFN4Q6PJG9 635 aa6.67□□□□□ -1.34
SSR1-209ENST00000488834 EZH1Q92800 747 aaPredicted RBP6.67□□□□□ -1.34
SSR1-209ENST00000488834 RNF34Q969K3 372 aa6.67□□□□□ -1.34
SSR1-209ENST00000488834 GSX1Q9H4S2 264 aaPredicted RBP6.67□□□□□ -1.34
SSR1-209ENST00000488834 ATG3Q9NT62 314 aa6.67□□□□□ -1.34
SSR1-209ENST00000488834 PCOLCE2Q9UKZ9 415 aa6.67□□□□□ -1.34
SSR1-209ENST00000488834 SNCAIPQ9Y6H5 919 aa6.67□□□□□ -1.34
SSR1-209ENST00000488834 FANCGO15287 622 aa6.66□□□□□ -1.34
SSR1-209ENST00000488834 RECKO95980 971 aa6.66□□□□□ -1.34
SSR1-209ENST00000488834 ZMYM1Q5SVZ6 1142 aa6.66□□□□□ -1.34
SSR1-209ENST00000488834 ERMP1Q7Z2K6 904 aa6.66□□□□□ -1.34
SSR1-209ENST00000488834 SLC51AQ86UW1 340 aa6.66□□□□□ -1.34
SSR1-209ENST00000488834 GOLM1Q8NBJ4 401 aa6.66□□□□□ -1.34
SSR1-209ENST00000488834 COPRSQ9NQ92 184 aa6.66□□□□□ -1.34
SSR1-209ENST00000488834 METTL5Q9NRN9 209 aaKnown RBP6.66□□□□□ -1.34
SSR1-209ENST00000488834 UNCXA6NJT0 531 aa6.65□□□□□ -1.34
SSR1-209ENST00000488834 WDR64B1ANS9 1081 aa6.65□□□□□ -1.34
SSR1-209ENST00000488834 NEFMP07197 916 aa6.65□□□□□ -1.34
SSR1-209ENST00000488834 RPL6Q02878 288 aaKnown RBP6.65□□□□□ -1.34
SSR1-209ENST00000488834 ZBTB37Q5TC79 503 aa6.65□□□□□ -1.34
SSR1-209ENST00000488834 BNC2Q6ZN30 1099 aaPredicted RBP6.65□□□□□ -1.34
SSR1-209ENST00000488834 CCDC84Q86UT8 332 aaPredicted RBP6.65□□□□□ -1.34
SSR1-209ENST00000488834 USP48Q86UV5 1035 aa6.65□□□□□ -1.34
SSR1-209ENST00000488834 KCT2Q8NC54 265 aa6.65□□□□□ -1.34
SSR1-209ENST00000488834 ZNF507Q8TCN5 953 aa6.65□□□□□ -1.34
SSR1-209ENST00000488834 ISL2Q96A47 359 aa6.65□□□□□ -1.34
SSR1-209ENST00000488834 OSBPL1AQ9BXW6 950 aa6.65□□□□□ -1.34
SSR1-209ENST00000488834 PRKAG2Q9UGJ0 569 aa6.65□□□□□ -1.34
SSR1-209ENST00000488834 F13A1P00488 732 aa6.64□□□□□ -1.35
SSR1-209ENST00000488834 EIF4A3P38919 411 aaKnown RBP6.64□□□□□ -1.35
SSR1-209ENST00000488834 CDK8P49336 464 aa6.64□□□□□ -1.35
SSR1-209ENST00000488834 FANCCQ00597 558 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms