RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 NOL9Q5SY16 702 aaKnown RBP30.24■■■□□ 2.43
LIME1-206ENST00000487026 NSUN4Q96CB9 384 aaKnown RBP30.24■■■□□ 2.43
LIME1-206ENST00000487026 RAI14Q9P0K7 980 aa30.24■■■□□ 2.43
LIME1-206ENST00000487026 RFX7Q2KHR2 1363 aa30.24■■■□□ 2.43
LIME1-206ENST00000487026 ATRNL1Q5VV63 1379 aa30.24■■■□□ 2.43
LIME1-206ENST00000487026 PHF20L1A8MW92 1017 aa30.23■■■□□ 2.43
LIME1-206ENST00000487026 ZBTB7BO15156 539 aaPredicted RBP30.23■■■□□ 2.43
LIME1-206ENST00000487026 TLR2O60603 784 aa30.23■■■□□ 2.43
LIME1-206ENST00000487026 SURF6O75683 361 aaKnown RBP30.23■■■□□ 2.43
LIME1-206ENST00000487026 SNRKQ9NRH2 765 aa30.23■■■□□ 2.43
LIME1-206ENST00000487026 RHBDL3P58872 404 aa30.22■■■□□ 2.43
LIME1-206ENST00000487026 TNNI3KQ59H18 835 aa30.22■■■□□ 2.43
LIME1-206ENST00000487026 KCNH4Q9UQ05 1017 aa30.22■■■□□ 2.43
LIME1-206ENST00000487026 FPGT-TNNI3KV9GXZ4 949 aa30.22■■■□□ 2.43
LIME1-206ENST00000487026 UQCRFS1P1P0C7P4 283 aa30.21■■■□□ 2.43
LIME1-206ENST00000487026 DBNDD2Q9BQY9 259 aa30.21■■■□□ 2.43
LIME1-206ENST00000487026 ZCCHC17Q9NP64 241 aaKnown RBP30.21■■■□□ 2.43
LIME1-206ENST00000487026 GSTO1P78417 241 aa30.2■■■□□ 2.43
LIME1-206ENST00000487026 ARHGAP39Q9C0H5 1083 aa30.2■■■□□ 2.43
LIME1-206ENST00000487026 GPR108Q9NPR9 543 aa30.2■■■□□ 2.43
LIME1-206ENST00000487026 LRP2BPQ9P2M1 347 aa30.2■■■□□ 2.43
LIME1-206ENST00000487026 ZBED9Q6R2W3 1325 aa30.2■■■□□ 2.42
LIME1-206ENST00000487026 PDHXO00330 501 aa30.19■■■□□ 2.42
LIME1-206ENST00000487026 ECM2O94769 699 aaPredicted RBP30.19■■■□□ 2.42
LIME1-206ENST00000487026 LDHCP07864 332 aa30.19■■■□□ 2.42
LIME1-206ENST00000487026 MOGSQ13724 837 aa30.19■■■□□ 2.42
LIME1-206ENST00000487026 TTC39AQ5SRH9 613 aa30.19■■■□□ 2.42
LIME1-206ENST00000487026 ANKRD23Q86SG2 305 aa30.19■■■□□ 2.42
LIME1-206ENST00000487026 MAP3K10Q02779 954 aa30.18■■■□□ 2.42
LIME1-206ENST00000487026 SCYL3Q8IZE3 742 aa30.18■■■□□ 2.42
LIME1-206ENST00000487026 ZHX2Q9Y6X8 837 aa30.18■■■□□ 2.42
LIME1-206ENST00000487026 DOCK2Q92608 1830 aa30.17■■■□□ 2.42
LIME1-206ENST00000487026 PDE4DIPQ5VU43 2346 aa30.17■■■□□ 2.42
LIME1-206ENST00000487026 ARHGEF6Q15052 776 aa30.17■■■□□ 2.42
LIME1-206ENST00000487026 CCDC158Q5M9N0 1113 aa30.17■■■□□ 2.42
LIME1-206ENST00000487026 PANK1Q8TE04 598 aa30.17■■■□□ 2.42
LIME1-206ENST00000487026 PICK1Q9NRD5 415 aa30.17■■■□□ 2.42
LIME1-206ENST00000487026 CPA4Q9UI42 421 aa30.17■■■□□ 2.42
LIME1-206ENST00000487026 POTEFA5A3E0 1075 aa30.16■■■□□ 2.42
LIME1-206ENST00000487026 PTPRAP18433 802 aa30.16■■■□□ 2.42
LIME1-206ENST00000487026 NOP58Q9Y2X3 529 aaKnown RBP30.16■■■□□ 2.42
LIME1-206ENST00000487026 PTCH2Q9Y6C5 1203 aa30.16■■■□□ 2.42
LIME1-206ENST00000487026 CENPFP49454 3210 aa30.16■■■□□ 2.42
LIME1-206ENST00000487026 CXCL11O14625 94 aa30.15■■■□□ 2.42
LIME1-206ENST00000487026 LACTBP83111 547 aaPredicted RBP30.15■■■□□ 2.42
LIME1-206ENST00000487026 C17orf99Q6UX52 265 aa30.15■■■□□ 2.42
LIME1-206ENST00000487026 FRMD4AQ9P2Q2 1039 aaPredicted RBP30.15■■■□□ 2.42
LIME1-206ENST00000487026 FAM196BA6NMK8 535 aa30.14■■■□□ 2.42
LIME1-206ENST00000487026 KIF22Q14807 665 aa30.14■■■□□ 2.42
LIME1-206ENST00000487026 GPAT2Q6NUI2 795 aa30.14■■■□□ 2.42
LIME1-206ENST00000487026 ARMC5Q96C12 935 aa30.14■■■□□ 2.42
LIME1-206ENST00000487026 CCDC8Q9H0W5 538 aaPredicted RBP30.14■■■□□ 2.42
LIME1-206ENST00000487026 ZSWIM8A7E2V4 1837 aa30.13■■■□□ 2.41
LIME1-206ENST00000487026 TEX11Q8IYF3 940 aa30.13■■■□□ 2.41
LIME1-206ENST00000487026 SH3RF3Q8TEJ3 882 aaPredicted RBP30.13■■■□□ 2.41
LIME1-206ENST00000487026 TLR7Q9NYK1 1049 aaKnown RBP30.13■■■□□ 2.41
LIME1-206ENST00000487026 CTNND1O60716 968 aaKnown RBP30.12■■■□□ 2.41
LIME1-206ENST00000487026 NPM3O75607 178 aaKnown RBP30.12■■■□□ 2.41
LIME1-206ENST00000487026 CYP2E1P05181 493 aaPredicted RBP30.12■■■□□ 2.41
LIME1-206ENST00000487026 CEP85Q6P2H3 762 aa30.12■■■□□ 2.41
LIME1-206ENST00000487026 CCDC84Q86UT8 332 aaPredicted RBP30.12■■■□□ 2.41
LIME1-206ENST00000487026 DBNLQ9UJU6 430 aaKnown RBP30.12■■■□□ 2.41
LIME1-206ENST00000487026 AFG3L2Q9Y4W6 797 aa30.12■■■□□ 2.41
LIME1-206ENST00000487026 MAP4K4O95819 1239 aaPredicted RBP30.11■■■□□ 2.41
LIME1-206ENST00000487026 CTGFP29279 349 aa30.11■■■□□ 2.41
LIME1-206ENST00000487026 NAA16Q6N069 864 aaPredicted RBP30.11■■■□□ 2.41
LIME1-206ENST00000487026 EAF2Q96CJ1 260 aaPredicted RBP30.11■■■□□ 2.41
LIME1-206ENST00000487026 OSBPL5Q9H0X9 879 aaPredicted RBP30.11■■■□□ 2.41
LIME1-206ENST00000487026 XPO5Q9HAV4 1204 aaKnown RBP eCLIP30.11■■■□□ 2.412e-6■■■■■ 27.8
LIME1-206ENST00000487026 A0A0G2JLL6 359 aaPredicted RBP30.1■■■□□ 2.41
LIME1-206ENST00000487026 CYP2C8P10632 490 aa30.1■■■□□ 2.41
LIME1-206ENST00000487026 ZAP70P43403 619 aa30.1■■■□□ 2.41
LIME1-206ENST00000487026 SLC9C1Q4G0N8 1177 aa30.1■■■□□ 2.41
LIME1-206ENST00000487026 GADL1Q6ZQY3 521 aa30.1■■■□□ 2.41
LIME1-206ENST00000487026 PRRT2Q7Z6L0 340 aaPredicted RBP30.1■■■□□ 2.41
LIME1-206ENST00000487026 AATFQ9NY61 560 aaKnown RBP eCLIP30.1■■■□□ 2.41
LIME1-206ENST00000487026 ADGRA2Q96PE1 1338 aa30.1■■■□□ 2.41
LIME1-206ENST00000487026 TBC1D12O60347 775 aa30.09■■■□□ 2.41
LIME1-206ENST00000487026 NOL10Q9BSC4 688 aaKnown RBP30.09■■■□□ 2.41
LIME1-206ENST00000487026 PIH1D3Q9NQM4 214 aaKnown RBP30.09■■■□□ 2.41
LIME1-206ENST00000487026 MYCP01106 439 aaPredicted RBP30.08■■■□□ 2.41
LIME1-206ENST00000487026 FASTKD5Q7L8L6 764 aaKnown RBP30.08■■■□□ 2.41
LIME1-206ENST00000487026 ADGRA1Q86SQ6 560 aa30.08■■■□□ 2.41
LIME1-206ENST00000487026 ZNF333Q96JL9 665 aa30.08■■■□□ 2.41
LIME1-206ENST00000487026 ZNF512BQ96KM6 892 aaPredicted RBP30.08■■■□□ 2.41
LIME1-206ENST00000487026 EXOC6BQ9Y2D4 811 aa30.08■■■□□ 2.41
LIME1-206ENST00000487026 TRIM75PA6NK02 468 aa30.07■■■□□ 2.4
LIME1-206ENST00000487026 EN2P19622 333 aaPredicted RBP30.07■■■□□ 2.4
LIME1-206ENST00000487026 PSMC4P43686 418 aa30.07■■■□□ 2.4
LIME1-206ENST00000487026 NBPF11Q86T75 865 aa30.07■■■□□ 2.4
LIME1-206ENST00000487026 SH3TC2Q8TF17 1288 aa30.07■■■□□ 2.4
LIME1-206ENST00000487026 TRIM47Q96LD4 638 aa30.07■■■□□ 2.4
LIME1-206ENST00000487026 PARK7Q99497 189 aaKnown RBP30.07■■■□□ 2.4
LIME1-206ENST00000487026 KIAA0100Q14667 2235 aaKnown RBP30.06■■■□□ 2.4
LIME1-206ENST00000487026 BAG3O95817 575 aa30.06■■■□□ 2.4
LIME1-206ENST00000487026 RRP1BQ14684 758 aaKnown RBP30.05■■■□□ 2.4
LIME1-206ENST00000487026 NDUFB9Q9Y6M9 179 aa30.05■■■□□ 2.4
LIME1-206ENST00000487026 DOCK1Q14185 1865 aa30.04■■■□□ 2.4
LIME1-206ENST00000487026 FMNL1O95466 1100 aaPredicted RBP30.04■■■□□ 2.4
LIME1-206ENST00000487026 GNRH1P01148 92 aa30.04■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms