RNA–Protein interactions for RNA: ENST00000485363.1

SIK3-211, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-211ENST00000485363 NOL9Q5SY16 702 aaKnown RBP19.51■□□□□ 0.71
SIK3-211ENST00000485363 CEP85Q6P2H3 762 aa19.51■□□□□ 0.71
SIK3-211ENST00000485363 FAM43AQ8N2R8 423 aa19.51■□□□□ 0.71
SIK3-211ENST00000485363 ZNF384Q8TF68 577 aa19.51■□□□□ 0.71
SIK3-211ENST00000485363 DBNDD2Q9BQY9 259 aa19.51■□□□□ 0.71
SIK3-211ENST00000485363 ZCCHC17Q9NP64 241 aaKnown RBP19.51■□□□□ 0.71
SIK3-211ENST00000485363 LRP2BPQ9P2M1 347 aa19.51■□□□□ 0.71
SIK3-211ENST00000485363 TRIM17Q9Y577 477 aa19.51■□□□□ 0.71
SIK3-211ENST00000485363 MAP4K4O95819 1239 aaPredicted RBP19.5■□□□□ 0.71
SIK3-211ENST00000485363 SOX10P56693 466 aa19.5■□□□□ 0.71
SIK3-211ENST00000485363 PICALMQ13492 652 aa19.5■□□□□ 0.71
SIK3-211ENST00000485363 DDX4Q9NQI0 724 aaKnown RBP19.5■□□□□ 0.71
SIK3-211ENST00000485363 ATRNL1Q5VV63 1379 aa19.49■□□□□ 0.71
SIK3-211ENST00000485363 BTBD19C9JJ37 291 aa19.49■□□□□ 0.71
SIK3-211ENST00000485363 RHBDL3P58872 404 aa19.49■□□□□ 0.71
SIK3-211ENST00000485363 SH3BP5LQ7L8J4 393 aa19.49■□□□□ 0.71
SIK3-211ENST00000485363 OTOP1Q7RTM1 612 aa19.49■□□□□ 0.71
SIK3-211ENST00000485363 CD99L2Q8TCZ2 262 aa19.49■□□□□ 0.71
SIK3-211ENST00000485363 NPM3O75607 178 aaKnown RBP19.48■□□□□ 0.71
SIK3-211ENST00000485363 ZNF512BQ96KM6 892 aaPredicted RBP19.48■□□□□ 0.71
SIK3-211ENST00000485363 SNRKQ9NRH2 765 aa19.48■□□□□ 0.71
SIK3-211ENST00000485363 DDTLA6NHG4 134 aaPredicted RBP19.47■□□□□ 0.71
SIK3-211ENST00000485363 PHF20L1A8MW92 1017 aa19.47■□□□□ 0.71
SIK3-211ENST00000485363 ERC1Q8IUD2 1116 aa19.47■□□□□ 0.71
SIK3-211ENST00000485363 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.47■□□□□ 0.71
SIK3-211ENST00000485363 NOL10Q9BSC4 688 aaKnown RBP19.47■□□□□ 0.71
SIK3-211ENST00000485363 EFCC1Q9HA90 598 aa19.47■□□□□ 0.71
SIK3-211ENST00000485363 DBNLQ9UJU6 430 aaKnown RBP19.47■□□□□ 0.71
SIK3-211ENST00000485363 KCNH4Q9UQ05 1017 aa19.47■□□□□ 0.71
SIK3-211ENST00000485363 MAST2Q6P0Q8 1798 aa19.47■□□□□ 0.71
SIK3-211ENST00000485363 MAP3K10Q02779 954 aa19.46■□□□□ 0.71
SIK3-211ENST00000485363 ARHGEF6Q15052 776 aa19.46■□□□□ 0.71
SIK3-211ENST00000485363 SCYL3Q8IZE3 742 aa19.46■□□□□ 0.71
SIK3-211ENST00000485363 CCDC8Q9H0W5 538 aaPredicted RBP19.46■□□□□ 0.71
SIK3-211ENST00000485363 PICK1Q9NRD5 415 aa19.46■□□□□ 0.71
SIK3-211ENST00000485363 TLR2O60603 784 aa19.45■□□□□ 0.7
SIK3-211ENST00000485363 IGSF3O75054 1194 aa19.45■□□□□ 0.7
SIK3-211ENST00000485363 HSP90AB4PQ58FF6 505 aa19.45■□□□□ 0.7
SIK3-211ENST00000485363 NAA16Q6N069 864 aaPredicted RBP19.45■□□□□ 0.7
SIK3-211ENST00000485363 ANKRD23Q86SG2 305 aa19.45■□□□□ 0.7
SIK3-211ENST00000485363 EAF2Q96CJ1 260 aaPredicted RBP19.45■□□□□ 0.7
SIK3-211ENST00000485363 TLR7Q9NYK1 1049 aaKnown RBP19.45■□□□□ 0.7
SIK3-211ENST00000485363 RCAN3Q9UKA8 241 aa19.45■□□□□ 0.7
SIK3-211ENST00000485363 DDX19BQ9UMR2 479 aa19.45■□□□□ 0.7
SIK3-211ENST00000485363 EXOC6BQ9Y2D4 811 aa19.45■□□□□ 0.7
SIK3-211ENST00000485363 PTPN22Q9Y2R2 807 aa19.45■□□□□ 0.7
SIK3-211ENST00000485363 COL2A1P02458 1487 aaPredicted RBP19.44■□□□□ 0.7
SIK3-211ENST00000485363 CXCL11O14625 94 aa19.44■□□□□ 0.7
SIK3-211ENST00000485363 TBC1D12O60347 775 aa19.44■□□□□ 0.7
SIK3-211ENST00000485363 BAG3O95817 575 aa19.44■□□□□ 0.7
SIK3-211ENST00000485363 CYP2E1P05181 493 aaPredicted RBP19.44■□□□□ 0.7
SIK3-211ENST00000485363 ZAP70P43403 619 aa19.44■□□□□ 0.7
SIK3-211ENST00000485363 TEX11Q8IYF3 940 aa19.44■□□□□ 0.7
SIK3-211ENST00000485363 HTTP42858 3142 aa19.44■□□□□ 0.7
SIK3-211ENST00000485363 DOCK1Q14185 1865 aa19.43■□□□□ 0.7
SIK3-211ENST00000485363 MYO5AQ9Y4I1 1855 aaKnown RBP19.43■□□□□ 0.7
SIK3-211ENST00000485363 CTNND1O60716 968 aaKnown RBP19.43■□□□□ 0.7
SIK3-211ENST00000485363 PLCG2P16885 1265 aa19.43■□□□□ 0.7
SIK3-211ENST00000485363 PTPRAP18433 802 aa19.43■□□□□ 0.7
SIK3-211ENST00000485363 RPAP2Q8IXW5 612 aaPredicted RBP19.43■□□□□ 0.7
SIK3-211ENST00000485363 OSBPL5Q9H0X9 879 aaPredicted RBP19.43■□□□□ 0.7
SIK3-211ENST00000485363 COG6Q9Y2V7 657 aa19.43■□□□□ 0.7
SIK3-211ENST00000485363 PDHXO00330 501 aa19.42■□□□□ 0.7
SIK3-211ENST00000485363 SH3RF3Q8TEJ3 882 aaPredicted RBP19.42■□□□□ 0.7
SIK3-211ENST00000485363 CHMP4BQ9H444 224 aaKnown RBP19.42■□□□□ 0.7
SIK3-211ENST00000485363 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.42■□□□□ 0.76e-6■■□□□ 12.3
SIK3-211ENST00000485363 AATFQ9NY61 560 aaKnown RBP eCLIP19.42■□□□□ 0.7
SIK3-211ENST00000485363 ZHX2Q9Y6X8 837 aa19.42■□□□□ 0.7
SIK3-211ENST00000485363 SLURP2P0DP57 97 aa19.41■□□□□ 0.7
SIK3-211ENST00000485363 PPP4CP60510 307 aa19.41■□□□□ 0.7
SIK3-211ENST00000485363 CAP1Q01518 475 aa19.41■□□□□ 0.7
SIK3-211ENST00000485363 MOGSQ13724 837 aa19.41■□□□□ 0.7
SIK3-211ENST00000485363 KIF22Q14807 665 aa19.41■□□□□ 0.7
SIK3-211ENST00000485363 AACSQ86V21 672 aa19.41■□□□□ 0.7
SIK3-211ENST00000485363 PIH1D3Q9NQM4 214 aaKnown RBP19.41■□□□□ 0.7
SIK3-211ENST00000485363 AFG3L2Q9Y4W6 797 aa19.41■□□□□ 0.7
SIK3-211ENST00000485363 TNRC18O15417 2968 aaPredicted RBP19.41■□□□□ 0.7
SIK3-211ENST00000485363 HMMRO75330 724 aa19.4■□□□□ 0.7
SIK3-211ENST00000485363 LACTBP83111 547 aaPredicted RBP19.4■□□□□ 0.7
SIK3-211ENST00000485363 FASTKD5Q7L8L6 764 aaKnown RBP19.4■□□□□ 0.7
SIK3-211ENST00000485363 RHPN1Q8TCX5 695 aa19.4■□□□□ 0.7
SIK3-211ENST00000485363 ZBTB40Q9NUA8 1239 aa19.4■□□□□ 0.7
SIK3-211ENST00000485363 PHIPQ8WWQ0 1821 aa19.39■□□□□ 0.7
SIK3-211ENST00000485363 A0A0G2JLL6 359 aaPredicted RBP19.39■□□□□ 0.69
SIK3-211ENST00000485363 FAM196BA6NMK8 535 aa19.39■□□□□ 0.69
SIK3-211ENST00000485363 C17orf99Q6UX52 265 aa19.39■□□□□ 0.69
SIK3-211ENST00000485363 PRRT2Q7Z6L0 340 aaPredicted RBP19.39■□□□□ 0.69
SIK3-211ENST00000485363 ADGRA1Q86SQ6 560 aa19.39■□□□□ 0.69
SIK3-211ENST00000485363 PARK7Q99497 189 aaKnown RBP19.39■□□□□ 0.69
SIK3-211ENST00000485363 DHX36Q9H2U1 1008 aaKnown RBP19.39■□□□□ 0.69
SIK3-211ENST00000485363 IL1RAPL2Q9NP60 686 aa19.39■□□□□ 0.69
SIK3-211ENST00000485363 CENPFP49454 3210 aa19.39■□□□□ 0.69
SIK3-211ENST00000485363 FOCADQ5VW36 1801 aa19.39■□□□□ 0.69
SIK3-211ENST00000485363 CDK5RAP2Q96SN8 1893 aa19.39■□□□□ 0.69
SIK3-211ENST00000485363 PTPRFP10586 1907 aa19.39■□□□□ 0.69
SIK3-211ENST00000485363 IDH1O75874 414 aaKnown RBP19.38■□□□□ 0.69
SIK3-211ENST00000485363 GPAT2Q6NUI2 795 aa19.38■□□□□ 0.69
SIK3-211ENST00000485363 CLASRPQ8N2M8 674 aaKnown RBP19.38■□□□□ 0.69
SIK3-211ENST00000485363 TGFBRAP1Q8WUH2 860 aa19.38■□□□□ 0.69
SIK3-211ENST00000485363 KIF1BPQ96EK5 621 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms