RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 DIS3L2Q8IYB7 885 aaKnown RBP12.9□□□□□ -0.34
SMPD4-218ENST00000482171 CASQ1P31415 396 aa12.9□□□□□ -0.34
SMPD4-218ENST00000482171 TGFBRAP1Q8WUH2 860 aa12.9□□□□□ -0.34
SMPD4-218ENST00000482171 PALLDQ8WX93 1383 aa12.9□□□□□ -0.35
SMPD4-218ENST00000482171 GNG11P61952 73 aa12.89□□□□□ -0.35
SMPD4-218ENST00000482171 KIF4BQ2VIQ3 1234 aa12.89□□□□□ -0.35
SMPD4-218ENST00000482171 JAKMIP3Q5VZ66 844 aa12.89□□□□□ -0.35
SMPD4-218ENST00000482171 CIAO1O76071 339 aa12.89□□□□□ -0.35
SMPD4-218ENST00000482171 RDXP35241 583 aaKnown RBP12.89□□□□□ -0.35
SMPD4-218ENST00000482171 ZNF174Q15697 407 aa12.89□□□□□ -0.35
SMPD4-218ENST00000482171 OGFOD1Q8N543 542 aa12.89□□□□□ -0.35
SMPD4-218ENST00000482171 CCDC12Q8WUD4 166 aaPredicted RBP12.89□□□□□ -0.35
SMPD4-218ENST00000482171 GPHNQ9NQX3 736 aaPredicted RBP12.89□□□□□ -0.35
SMPD4-218ENST00000482171 PRKAB2O43741 272 aa12.89□□□□□ -0.35
SMPD4-218ENST00000482171 GTF2IP78347 998 aa12.89□□□□□ -0.35
SMPD4-218ENST00000482171 KRT40Q6A162 431 aa12.89□□□□□ -0.35
SMPD4-218ENST00000482171 RICTORQ6R327 1708 aa12.88□□□□□ -0.35
SMPD4-218ENST00000482171 ENOX2Q16206 610 aaKnown RBP12.88□□□□□ -0.35
SMPD4-218ENST00000482171 TMEM266Q2M3C6 531 aa12.88□□□□□ -0.35
SMPD4-218ENST00000482171 RTL9Q8NET4 1388 aa12.88□□□□□ -0.35
SMPD4-218ENST00000482171 RIMS1Q86UR5 1692 aaKnown RBP12.88□□□□□ -0.35
SMPD4-218ENST00000482171 STX17P56962 302 aa12.88□□□□□ -0.35
SMPD4-218ENST00000482171 TCP10Q12799 353 aa12.88□□□□□ -0.35
SMPD4-218ENST00000482171 BRAPQ7Z569 592 aa12.88□□□□□ -0.35
SMPD4-218ENST00000482171 WDR66Q8TBY9 1149 aa12.88□□□□□ -0.35
SMPD4-218ENST00000482171 LLPHQ9BRT6 129 aaKnown RBP12.88□□□□□ -0.35
SMPD4-218ENST00000482171 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.88□□□□□ -0.35
SMPD4-218ENST00000482171 RGS12O14924 1447 aa12.88□□□□□ -0.35
SMPD4-218ENST00000482171 GNAQP50148 359 aa12.88□□□□□ -0.35
SMPD4-218ENST00000482171 DPP8Q6V1X1 898 aaPredicted RBP12.88□□□□□ -0.35
SMPD4-218ENST00000482171 PPARAQ07869 468 aa12.88□□□□□ -0.35
SMPD4-218ENST00000482171 SCRN1Q12765 414 aa12.88□□□□□ -0.35
SMPD4-218ENST00000482171 MFSD14BQ5SR56 506 aa12.88□□□□□ -0.35
SMPD4-218ENST00000482171 SYT10Q6XYQ8 523 aa12.88□□□□□ -0.35
SMPD4-218ENST00000482171 GPR108Q9NPR9 543 aa12.88□□□□□ -0.35
SMPD4-218ENST00000482171 CYP19A1P11511 503 aaPredicted RBP12.87□□□□□ -0.35
SMPD4-218ENST00000482171 PLCG2P16885 1265 aa12.87□□□□□ -0.35
SMPD4-218ENST00000482171 TNNI2P48788 182 aa12.87□□□□□ -0.35
SMPD4-218ENST00000482171 ANO1Q5XXA6 986 aa12.87□□□□□ -0.35
SMPD4-218ENST00000482171 RAB34Q9BZG1 259 aa12.87□□□□□ -0.35
SMPD4-218ENST00000482171 FBXO3Q9UK99 471 aa12.87□□□□□ -0.35
SMPD4-218ENST00000482171 VWA3AA6NCI4 1184 aa12.87□□□□□ -0.35
SMPD4-218ENST00000482171 LIG1P18858 919 aa12.87□□□□□ -0.35
SMPD4-218ENST00000482171 KRT2P35908 639 aa12.87□□□□□ -0.35
SMPD4-218ENST00000482171 TFAP4Q01664 338 aa12.87□□□□□ -0.35
SMPD4-218ENST00000482171 NECTIN1Q15223 517 aa12.87□□□□□ -0.35
SMPD4-218ENST00000482171 KIF2CQ99661 725 aa12.87□□□□□ -0.35
SMPD4-218ENST00000482171 GPCPD1Q9NPB8 672 aa12.87□□□□□ -0.35
SMPD4-218ENST00000482171 CALM1P0DP23 149 aa12.87□□□□□ -0.35
SMPD4-218ENST00000482171 CALM2P0DP24 149 aa12.87□□□□□ -0.35
SMPD4-218ENST00000482171 CALM3P0DP25 149 aa12.87□□□□□ -0.35
SMPD4-218ENST00000482171 LRMPQ12912 555 aa12.87□□□□□ -0.35
SMPD4-218ENST00000482171 MCM6Q14566 821 aa12.87□□□□□ -0.35
SMPD4-218ENST00000482171 TMEM132AQ24JP5 1023 aa12.87□□□□□ -0.35
SMPD4-218ENST00000482171 DHX37Q8IY37 1157 aaKnown RBP12.87□□□□□ -0.35
SMPD4-218ENST00000482171 UIMC1Q96RL1 719 aa12.87□□□□□ -0.35
SMPD4-218ENST00000482171 USP28Q96RU2 1077 aa12.87□□□□□ -0.35
SMPD4-218ENST00000482171 VPS54Q9P1Q0 977 aa12.87□□□□□ -0.35
SMPD4-218ENST00000482171 DYNLL1P63167 89 aaKnown RBP12.86□□□□□ -0.35
SMPD4-218ENST00000482171 CUL4AQ13619 759 aa12.86□□□□□ -0.35
SMPD4-218ENST00000482171 WDR78Q5VTH9 848 aa12.86□□□□□ -0.35
SMPD4-218ENST00000482171 TTC6Q86TZ1 520 aa12.86□□□□□ -0.35
SMPD4-218ENST00000482171 GPR101Q96P66 508 aaPredicted RBP12.86□□□□□ -0.35
SMPD4-218ENST00000482171 MYO5BQ9ULV0 1848 aa12.86□□□□□ -0.35
SMPD4-218ENST00000482171 COL3A1P02461 1466 aaPredicted RBP12.86□□□□□ -0.35
SMPD4-218ENST00000482171 MCAMP43121 646 aa12.86□□□□□ -0.35
SMPD4-218ENST00000482171 RASGRF1Q13972 1273 aa12.86□□□□□ -0.35
SMPD4-218ENST00000482171 ELF2Q15723 593 aa12.86□□□□□ -0.35
SMPD4-218ENST00000482171 DOK7Q18PE1 504 aa12.86□□□□□ -0.35
SMPD4-218ENST00000482171 PIH1D3Q9NQM4 214 aaKnown RBP12.86□□□□□ -0.35
SMPD4-218ENST00000482171 PDIA3P30101 505 aaKnown RBP12.86□□□□□ -0.35
SMPD4-218ENST00000482171 CCDC148Q8NFR7 591 aa12.86□□□□□ -0.35
SMPD4-218ENST00000482171 CUL5Q93034 780 aa12.86□□□□□ -0.35
SMPD4-218ENST00000482171 CALML4Q96GE6 196 aa12.86□□□□□ -0.35
SMPD4-218ENST00000482171 ERVV-1B6SEH8 477 aa12.85□□□□□ -0.35
SMPD4-218ENST00000482171 IBSPP21815 317 aaPredicted RBP12.85□□□□□ -0.35
SMPD4-218ENST00000482171 STAT6P42226 847 aa12.85□□□□□ -0.35
SMPD4-218ENST00000482171 UBASH3AP57075 661 aa12.85□□□□□ -0.35
SMPD4-218ENST00000482171 DMTNQ08495 405 aa12.85□□□□□ -0.35
SMPD4-218ENST00000482171 RRAGBQ5VZM2 374 aa12.85□□□□□ -0.35
SMPD4-218ENST00000482171 ARFGAP3Q9NP61 516 aa12.85□□□□□ -0.35
SMPD4-218ENST00000482171 TRPC5Q9UL62 973 aaPredicted RBP12.85□□□□□ -0.35
SMPD4-218ENST00000482171 KIAA0754O94854 1291 aa12.85□□□□□ -0.35
SMPD4-218ENST00000482171 DEXIO95424 95 aa12.85□□□□□ -0.35
SMPD4-218ENST00000482171 FAM160A1Q05DH4 1040 aa12.85□□□□□ -0.35
SMPD4-218ENST00000482171 CCDC178Q5BJE1 867 aa12.85□□□□□ -0.35
SMPD4-218ENST00000482171 CT47A1Q5JQC4 288 aaPredicted RBP12.85□□□□□ -0.35
SMPD4-218ENST00000482171 PIK3AP1Q6ZUJ8 805 aa12.85□□□□□ -0.35
SMPD4-218ENST00000482171 SEPT12Q8IYM1 358 aa12.85□□□□□ -0.35
SMPD4-218ENST00000482171 ZNF654Q8IZM8 581 aa12.85□□□□□ -0.35
SMPD4-218ENST00000482171 EYA3Q99504 573 aa12.85□□□□□ -0.35
SMPD4-218ENST00000482171 ATP10DQ9P241 1426 aa12.85□□□□□ -0.35
SMPD4-218ENST00000482171 ZNF804BA4D1E1 1349 aa12.85□□□□□ -0.35
SMPD4-218ENST00000482171 MYOM1P52179 1685 aa12.85□□□□□ -0.35
SMPD4-218ENST00000482171 CYP2D7A0A087X1C5 515 aa12.85□□□□□ -0.35
SMPD4-218ENST00000482171 KIF5CO60282 957 aa12.85□□□□□ -0.35
SMPD4-218ENST00000482171 PFKFB2O60825 505 aa12.85□□□□□ -0.35
SMPD4-218ENST00000482171 SCNN1DP51172 638 aa12.85□□□□□ -0.35
SMPD4-218ENST00000482171 PDIA6Q15084 440 aa12.85□□□□□ -0.35
SMPD4-218ENST00000482171 UBE3CQ15386 1083 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms