RNA–Protein interactions for RNA: ENST00000481690.2

GPCPD1-206, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 3

Gene GPCPD1, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-206ENST00000481690 ZNF112Q9UJU3 913 aa27.31■■□□□ 1.96
GPCPD1-206ENST00000481690 MYO5AQ9Y4I1 1855 aaKnown RBP27.3■■□□□ 1.96
GPCPD1-206ENST00000481690 WDHD1O75717 1129 aaPredicted RBP27.3■■□□□ 1.96
GPCPD1-206ENST00000481690 ZNF384Q8TF68 577 aa27.3■■□□□ 1.96
GPCPD1-206ENST00000481690 DDX4Q9NQI0 724 aaKnown RBP27.3■■□□□ 1.96
GPCPD1-206ENST00000481690 GPR75-ASB3A0A0A6YYF3 556 aa27.29■■□□□ 1.96
GPCPD1-206ENST00000481690 LDHCP07864 332 aa27.29■■□□□ 1.96
GPCPD1-206ENST00000481690 CCDC158Q5M9N0 1113 aa27.29■■□□□ 1.96
GPCPD1-206ENST00000481690 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.29■■□□□ 1.96
GPCPD1-206ENST00000481690 NSUN4Q96CB9 384 aaKnown RBP27.29■■□□□ 1.96
GPCPD1-206ENST00000481690 SNRKQ9NRH2 765 aa27.29■■□□□ 1.96
GPCPD1-206ENST00000481690 LRP2BPQ9P2M1 347 aa27.29■■□□□ 1.96
GPCPD1-206ENST00000481690 DOCK1Q14185 1865 aa27.28■■□□□ 1.96
GPCPD1-206ENST00000481690 ATRNL1Q5VV63 1379 aa27.28■■□□□ 1.96
GPCPD1-206ENST00000481690 BTBD19C9JJ37 291 aa27.28■■□□□ 1.96
GPCPD1-206ENST00000481690 NOL9Q5SY16 702 aaKnown RBP27.28■■□□□ 1.96
GPCPD1-206ENST00000481690 SH3BP5LQ7L8J4 393 aa27.28■■□□□ 1.96
GPCPD1-206ENST00000481690 DDTLA6NHG4 134 aaPredicted RBP27.27■■□□□ 1.96
GPCPD1-206ENST00000481690 CEP85Q6P2H3 762 aa27.27■■□□□ 1.96
GPCPD1-206ENST00000481690 EFCC1Q9HA90 598 aa27.27■■□□□ 1.96
GPCPD1-206ENST00000481690 RHBDL3P58872 404 aa27.26■■□□□ 1.95
GPCPD1-206ENST00000481690 NOP58Q9Y2X3 529 aaKnown RBP27.26■■□□□ 1.95
GPCPD1-206ENST00000481690 ZCCHC17Q9NP64 241 aaKnown RBP27.25■■□□□ 1.95
GPCPD1-206ENST00000481690 ZSWIM8A7E2V4 1837 aa27.25■■□□□ 1.95
GPCPD1-206ENST00000481690 SLURP2P0DP57 97 aa27.24■■□□□ 1.95
GPCPD1-206ENST00000481690 SCYL3Q8IZE3 742 aa27.24■■□□□ 1.95
GPCPD1-206ENST00000481690 NOL10Q9BSC4 688 aaKnown RBP27.24■■□□□ 1.95
GPCPD1-206ENST00000481690 PICK1Q9NRD5 415 aa27.24■■□□□ 1.95
GPCPD1-206ENST00000481690 KCNH4Q9UQ05 1017 aa27.24■■□□□ 1.95
GPCPD1-206ENST00000481690 PHF20L1A8MW92 1017 aa27.23■■□□□ 1.95
GPCPD1-206ENST00000481690 MS4A1P11836 297 aa27.23■■□□□ 1.95
GPCPD1-206ENST00000481690 CCDC8Q9H0W5 538 aaPredicted RBP27.23■■□□□ 1.95
GPCPD1-206ENST00000481690 TLR7Q9NYK1 1049 aaKnown RBP27.23■■□□□ 1.95
GPCPD1-206ENST00000481690 DBNLQ9UJU6 430 aaKnown RBP27.23■■□□□ 1.95
GPCPD1-206ENST00000481690 PTPN22Q9Y2R2 807 aa27.23■■□□□ 1.95
GPCPD1-206ENST00000481690 CDK5RAP2Q96SN8 1893 aa27.23■■□□□ 1.95
GPCPD1-206ENST00000481690 TLR2O60603 784 aa27.22■■□□□ 1.95
GPCPD1-206ENST00000481690 CAP1Q01518 475 aa27.22■■□□□ 1.95
GPCPD1-206ENST00000481690 NAA16Q6N069 864 aaPredicted RBP27.22■■□□□ 1.95
GPCPD1-206ENST00000481690 TEX11Q8IYF3 940 aa27.22■■□□□ 1.95
GPCPD1-206ENST00000481690 EXOC6BQ9Y2D4 811 aa27.22■■□□□ 1.95
GPCPD1-206ENST00000481690 ATAD5Q96QE3 1844 aa27.22■■□□□ 1.95
GPCPD1-206ENST00000481690 PTPRFP10586 1907 aa27.22■■□□□ 1.95
GPCPD1-206ENST00000481690 PHIPQ8WWQ0 1821 aa27.21■■□□□ 1.95
GPCPD1-206ENST00000481690 PDHXO00330 501 aa27.2■■□□□ 1.94
GPCPD1-206ENST00000481690 MAP4K4O95819 1239 aaPredicted RBP27.2■■□□□ 1.94
GPCPD1-206ENST00000481690 CYP2E1P05181 493 aaPredicted RBP27.2■■□□□ 1.94
GPCPD1-206ENST00000481690 ZAP70P43403 619 aa27.2■■□□□ 1.94
GPCPD1-206ENST00000481690 ARHGEF6Q15052 776 aa27.2■■□□□ 1.94
GPCPD1-206ENST00000481690 ANKRD23Q86SG2 305 aa27.2■■□□□ 1.94
GPCPD1-206ENST00000481690 EAF2Q96CJ1 260 aaPredicted RBP27.2■■□□□ 1.94
GPCPD1-206ENST00000481690 OSBPL5Q9H0X9 879 aaPredicted RBP27.2■■□□□ 1.94
GPCPD1-206ENST00000481690 FOCADQ5VW36 1801 aa27.2■■□□□ 1.94
GPCPD1-206ENST00000481690 FAM196BA6NMK8 535 aa27.19■■□□□ 1.94
GPCPD1-206ENST00000481690 NPM3O75607 178 aaKnown RBP27.19■■□□□ 1.94
GPCPD1-206ENST00000481690 PTPRAP18433 802 aa27.19■■□□□ 1.94
GPCPD1-206ENST00000481690 ERC1Q8IUD2 1116 aa27.19■■□□□ 1.94
GPCPD1-206ENST00000481690 SH3RF3Q8TEJ3 882 aaPredicted RBP27.19■■□□□ 1.94
GPCPD1-206ENST00000481690 AATFQ9NY61 560 aaKnown RBP eCLIP27.19■■□□□ 1.943e-6■□□□□ 8.5
GPCPD1-206ENST00000481690 ZHX2Q9Y6X8 837 aa27.19■■□□□ 1.94
GPCPD1-206ENST00000481690 MAP3K10Q02779 954 aa27.18■■□□□ 1.94
GPCPD1-206ENST00000481690 KIF22Q14807 665 aa27.18■■□□□ 1.94
GPCPD1-206ENST00000481690 ZNF512BQ96KM6 892 aaPredicted RBP27.18■■□□□ 1.94
GPCPD1-206ENST00000481690 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.18■■□□□ 1.94
GPCPD1-206ENST00000481690 COG6Q9Y2V7 657 aa27.18■■□□□ 1.94
GPCPD1-206ENST00000481690 COL2A1P02458 1487 aaPredicted RBP27.18■■□□□ 1.94
GPCPD1-206ENST00000481690 CXCL11O14625 94 aa27.17■■□□□ 1.94
GPCPD1-206ENST00000481690 CTNND1O60716 968 aaKnown RBP27.17■■□□□ 1.94
GPCPD1-206ENST00000481690 ECM2O94769 699 aaPredicted RBP27.17■■□□□ 1.94
GPCPD1-206ENST00000481690 BAG3O95817 575 aa27.17■■□□□ 1.94
GPCPD1-206ENST00000481690 ARHGAP39Q9C0H5 1083 aa27.17■■□□□ 1.94
GPCPD1-206ENST00000481690 PIH1D3Q9NQM4 214 aaKnown RBP27.17■■□□□ 1.94
GPCPD1-206ENST00000481690 CPA4Q9UI42 421 aa27.17■■□□□ 1.94
GPCPD1-206ENST00000481690 MOGSQ13724 837 aa27.16■■□□□ 1.94
GPCPD1-206ENST00000481690 AACSQ86V21 672 aa27.16■■□□□ 1.94
GPCPD1-206ENST00000481690 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.16■■□□□ 1.94
GPCPD1-206ENST00000481690 RCAN3Q9UKA8 241 aa27.16■■□□□ 1.94
GPCPD1-206ENST00000481690 PLCG2P16885 1265 aa27.15■■□□□ 1.94
GPCPD1-206ENST00000481690 LACTBP83111 547 aaPredicted RBP27.15■■□□□ 1.94
GPCPD1-206ENST00000481690 GADL1Q6ZQY3 521 aa27.15■■□□□ 1.94
GPCPD1-206ENST00000481690 ADGRA1Q86SQ6 560 aa27.15■■□□□ 1.94
GPCPD1-206ENST00000481690 DDX19BQ9UMR2 479 aa27.15■■□□□ 1.94
GPCPD1-206ENST00000481690 SIPA1L1O43166 1804 aa27.15■■□□□ 1.94
GPCPD1-206ENST00000481690 APBB1O00213 710 aa27.14■■□□□ 1.94
GPCPD1-206ENST00000481690 TBC1D12O60347 775 aa27.14■■□□□ 1.94
GPCPD1-206ENST00000481690 HSP90AB4PQ58FF6 505 aa27.14■■□□□ 1.94
GPCPD1-206ENST00000481690 CCDC84Q86UT8 332 aaPredicted RBP27.14■■□□□ 1.94
GPCPD1-206ENST00000481690 PARK7Q99497 189 aaKnown RBP27.14■■□□□ 1.94
GPCPD1-206ENST00000481690 IL1RAPL2Q9NP60 686 aa27.14■■□□□ 1.94
GPCPD1-206ENST00000481690 AFG3L2Q9Y4W6 797 aa27.14■■□□□ 1.94
GPCPD1-206ENST00000481690 PTCH2Q9Y6C5 1203 aa27.14■■□□□ 1.94
GPCPD1-206ENST00000481690 RBBP6Q7Z6E9 1792 aaKnown RBP27.14■■□□□ 1.93
GPCPD1-206ENST00000481690 PDE4DIPQ5VU43 2346 aa27.13■■□□□ 1.93
GPCPD1-206ENST00000481690 A0A0G2JLL6 359 aaPredicted RBP27.13■■□□□ 1.93
GPCPD1-206ENST00000481690 TRIM75PA6NK02 468 aa27.13■■□□□ 1.93
GPCPD1-206ENST00000481690 IDH1O75874 414 aaKnown RBP27.13■■□□□ 1.93
GPCPD1-206ENST00000481690 C17orf99Q6UX52 265 aa27.13■■□□□ 1.93
GPCPD1-206ENST00000481690 PRRT2Q7Z6L0 340 aaPredicted RBP27.13■■□□□ 1.93
GPCPD1-206ENST00000481690 NDUFB9Q9Y6M9 179 aa27.13■■□□□ 1.93
GPCPD1-206ENST00000481690 TNRC18O15417 2968 aaPredicted RBP27.12■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms