RNA–Protein interactions for RNA: ENST00000481441.1

RXRB-203, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 1,330 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-203ENST00000481441 DEFB118Q96PH6 123 aa21.75■■□□□ 1.07
RXRB-203ENST00000481441 USP40Q9NVE5 1235 aa21.75■■□□□ 1.07
RXRB-203ENST00000481441 SLC45A1Q9Y2W3 748 aa21.75■■□□□ 1.07
RXRB-203ENST00000481441 TFRCP02786 760 aaKnown RBP21.74■■□□□ 1.07
RXRB-203ENST00000481441 SLC5A1P13866 664 aa21.74■■□□□ 1.07
RXRB-203ENST00000481441 PTPRAP18433 802 aa21.74■■□□□ 1.07
RXRB-203ENST00000481441 CRISPLD2Q9H0B8 497 aa21.74■■□□□ 1.07
RXRB-203ENST00000481441 PAK6Q9NQU5 681 aaPredicted RBP21.74■■□□□ 1.07
RXRB-203ENST00000481441 STAP2Q9UGK3 403 aa21.74■■□□□ 1.07
RXRB-203ENST00000481441 AFG3L2Q9Y4W6 797 aa21.74■■□□□ 1.07
RXRB-203ENST00000481441 DOCK1Q14185 1865 aa21.73■■□□□ 1.07
RXRB-203ENST00000481441 LAMA3Q16787 3333 aa21.73■■□□□ 1.07
RXRB-203ENST00000481441 EYA2O00167 538 aa21.73■■□□□ 1.07
RXRB-203ENST00000481441 RFX5P48382 616 aaPredicted RBP21.73■■□□□ 1.07
RXRB-203ENST00000481441 MYH2Q9UKX2 1941 aa21.72■■□□□ 1.07
RXRB-203ENST00000481441 TNPO2O14787 897 aaKnown RBP21.72■■□□□ 1.07
RXRB-203ENST00000481441 GADL1Q6ZQY3 521 aa21.72■■□□□ 1.07
RXRB-203ENST00000481441 USP44Q9H0E7 712 aa21.72■■□□□ 1.07
RXRB-203ENST00000481441 MRS2Q9HD23 443 aa21.72■■□□□ 1.07
RXRB-203ENST00000481441 PICK1Q9NRD5 415 aa21.72■■□□□ 1.07
RXRB-203ENST00000481441 SALL1Q9NSC2 1324 aa21.71■■□□□ 1.07
RXRB-203ENST00000481441 RFX7Q2KHR2 1363 aa21.71■■□□□ 1.07
RXRB-203ENST00000481441 COL6A3P12111 3177 aa21.71■■□□□ 1.07
RXRB-203ENST00000481441 LDHBP07195 334 aaKnown RBP21.71■■□□□ 1.07
RXRB-203ENST00000481441 RGS3P49796 1198 aa21.71■■□□□ 1.07
RXRB-203ENST00000481441 MAP3K10Q02779 954 aa21.71■■□□□ 1.07
RXRB-203ENST00000481441 SH3BP5LQ7L8J4 393 aa21.71■■□□□ 1.07
RXRB-203ENST00000481441 PAWRQ96IZ0 340 aaKnown RBP21.71■■□□□ 1.07
RXRB-203ENST00000481441 IDI2Q9BXS1 227 aa21.71■■□□□ 1.07
RXRB-203ENST00000481441 CUL9Q8IWT3 2517 aa21.71■■□□□ 1.07
RXRB-203ENST00000481441 ENTPD3O75355 529 aa21.7■■□□□ 1.06
RXRB-203ENST00000481441 ATG9AQ7Z3C6 839 aa21.7■■□□□ 1.06
RXRB-203ENST00000481441 SMCR8Q8TEV9 937 aaPredicted RBP21.7■■□□□ 1.06
RXRB-203ENST00000481441 MRPL50Q8N5N7 158 aaKnown RBP21.69■■□□□ 1.06
RXRB-203ENST00000481441 GDF15Q99988 308 aa21.69■■□□□ 1.06
RXRB-203ENST00000481441 SLURP2P0DP57 97 aa21.68■■□□□ 1.06
RXRB-203ENST00000481441 BMP8BP34820 402 aa21.68■■□□□ 1.06
RXRB-203ENST00000481441 DIS3LQ8TF46 1054 aaKnown RBP21.68■■□□□ 1.06
RXRB-203ENST00000481441 NECAB2Q7Z6G3 386 aa21.67■■□□□ 1.06
RXRB-203ENST00000481441 COA7Q96BR5 231 aa21.67■■□□□ 1.06
RXRB-203ENST00000481441 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.67■■□□□ 1.06
RXRB-203ENST00000481441 GNL3LQ9NVN8 582 aaKnown RBP21.67■■□□□ 1.06
RXRB-203ENST00000481441 AGTPBP1Q9UPW5 1226 aa21.67■■□□□ 1.06
RXRB-203ENST00000481441 LRRFIP2Q9Y608 721 aaKnown RBP21.67■■□□□ 1.06
RXRB-203ENST00000481441 GAKO14976 1311 aa21.67■■□□□ 1.06
RXRB-203ENST00000481441 DDTLA6NHG4 134 aaPredicted RBP21.66■■□□□ 1.06
RXRB-203ENST00000481441 TRIM75PA6NK02 468 aa21.66■■□□□ 1.06
RXRB-203ENST00000481441 CTNND1O60716 968 aaKnown RBP21.66■■□□□ 1.06
RXRB-203ENST00000481441 ATP2B3Q16720 1220 aa21.66■■□□□ 1.06
RXRB-203ENST00000481441 ANKRD13CQ8N6S4 541 aa21.66■■□□□ 1.06
RXRB-203ENST00000481441 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.66■■□□□ 1.06
RXRB-203ENST00000481441 TAOK2Q9UL54 1235 aa21.66■■□□□ 1.06
RXRB-203ENST00000481441 DENND2AQ9ULE3 1009 aa21.66■■□□□ 1.06
RXRB-203ENST00000481441 PTPRCP08575 1304 aa21.66■■□□□ 1.06
RXRB-203ENST00000481441 SEMA3EO15041 775 aa21.65■■□□□ 1.06
RXRB-203ENST00000481441 FAM110CQ1W6H9 321 aa21.65■■□□□ 1.06
RXRB-203ENST00000481441 GPR153Q6NV75 609 aa21.65■■□□□ 1.06
RXRB-203ENST00000481441 CCDC84Q86UT8 332 aaPredicted RBP21.65■■□□□ 1.06
RXRB-203ENST00000481441 ZSCAN29Q8IWY8 852 aaPredicted RBP21.65■■□□□ 1.06
RXRB-203ENST00000481441 ANKLE1Q8NAG6 615 aa21.65■■□□□ 1.06
RXRB-203ENST00000481441 DDX4Q9NQI0 724 aaKnown RBP21.65■■□□□ 1.06
RXRB-203ENST00000481441 LOC285556D6RIA3 1793 aa21.64■■□□□ 1.06
RXRB-203ENST00000481441 ZBTB22O15209 634 aa21.64■■□□□ 1.05
RXRB-203ENST00000481441 PHKA1P46020 1223 aa21.64■■□□□ 1.05
RXRB-203ENST00000481441 MNX1P50219 401 aaPredicted RBP21.64■■□□□ 1.05
RXRB-203ENST00000481441 TREML2Q5T2D2 321 aa21.64■■□□□ 1.05
RXRB-203ENST00000481441 C7orf61Q8IZ16 206 aa21.63■■□□□ 1.05
RXRB-203ENST00000481441 CEP126Q9P2H0 1117 aa21.63■■□□□ 1.05
RXRB-203ENST00000481441 FBXO3Q9UK99 471 aa21.63■■□□□ 1.05
RXRB-203ENST00000481441 ZMYND8Q9ULU4 1186 aaPredicted RBP21.63■■□□□ 1.05
RXRB-203ENST00000481441 DDX60LQ5H9U9 1706 aaKnown RBP21.63■■□□□ 1.05
RXRB-203ENST00000481441 ZNF316A6NFI3 1004 aaPredicted RBP21.62■■□□□ 1.05
RXRB-203ENST00000481441 CIAO1O76071 339 aa21.62■■□□□ 1.05
RXRB-203ENST00000481441 FAM163AQ96GL9 167 aaPredicted RBP21.62■■□□□ 1.05
RXRB-203ENST00000481441 SIL1Q9H173 461 aa21.62■■□□□ 1.05
RXRB-203ENST00000481441 PNMA3Q9UL41 463 aa21.62■■□□□ 1.05
RXRB-203ENST00000481441 PLXNB2O15031 1838 aa21.61■■□□□ 1.05
RXRB-203ENST00000481441 HMGCRP04035 888 aa21.61■■□□□ 1.05
RXRB-203ENST00000481441 ZGPATQ8N5A5 531 aaKnown RBP21.61■■□□□ 1.05
RXRB-203ENST00000481441 DEFB123Q8N688 67 aa21.61■■□□□ 1.05
RXRB-203ENST00000481441 PROCA1Q8NCQ7 364 aaPredicted RBP21.61■■□□□ 1.05
RXRB-203ENST00000481441 GJD2Q9UKL4 321 aa21.61■■□□□ 1.05
RXRB-203ENST00000481441 TBC1D12O60347 775 aa21.6■■□□□ 1.05
RXRB-203ENST00000481441 PICALMQ13492 652 aa21.6■■□□□ 1.05
RXRB-203ENST00000481441 LRIT3Q3SXY7 679 aa21.6■■□□□ 1.05
RXRB-203ENST00000481441 NBPF3Q9H094 633 aa21.6■■□□□ 1.05
RXRB-203ENST00000481441 RPTORQ8N122 1335 aa21.6■■□□□ 1.05
RXRB-203ENST00000481441 A0A0C4DFX4 3053 aa21.6■■□□□ 1.05
RXRB-203ENST00000481441 ATAD5Q96QE3 1844 aa21.6■■□□□ 1.05
RXRB-203ENST00000481441 BTDP43251 543 aa21.59■■□□□ 1.05
RXRB-203ENST00000481441 GCLCP48506 637 aaPredicted RBP21.59■■□□□ 1.05
RXRB-203ENST00000481441 TRIM32Q13049 653 aa21.59■■□□□ 1.05
RXRB-203ENST00000481441 CCDC102BQ68D86 513 aa21.59■■□□□ 1.05
RXRB-203ENST00000481441 DZIP1Q86YF9 867 aaKnown RBP21.59■■□□□ 1.05
RXRB-203ENST00000481441 SSH1Q8WYL5 1049 aa21.59■■□□□ 1.05
RXRB-203ENST00000481441 ZNF521Q96K83 1311 aa21.59■■□□□ 1.05
RXRB-203ENST00000481441 PDS5AQ29RF7 1337 aaKnown RBP21.58■■□□□ 1.05
RXRB-203ENST00000481441 ADORA1P30542 326 aa21.58■■□□□ 1.05
RXRB-203ENST00000481441 RASGRF1Q13972 1273 aa21.58■■□□□ 1.05
RXRB-203ENST00000481441 Q7L0L9 218 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms