RNA–Protein interactions for RNA: ENST00000478909.5

CMSS1-203, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 5

Gene CMSS1, Length 753 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-203ENST00000478909 CLASRPQ8N2M8 674 aaKnown RBP7.4□□□□□ -1.22
CMSS1-203ENST00000478909 FNBP4Q8N3X1 1017 aaPredicted RBP7.4□□□□□ -1.22
CMSS1-203ENST00000478909 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.4□□□□□ -1.22
CMSS1-203ENST00000478909 C1orf216Q8TAB5 229 aa7.4□□□□□ -1.22
CMSS1-203ENST00000478909 RHPN1Q8TCX5 695 aa7.4□□□□□ -1.22
CMSS1-203ENST00000478909 AIDAQ96BJ3 306 aa7.4□□□□□ -1.22
CMSS1-203ENST00000478909 KIF2CQ99661 725 aa7.4□□□□□ -1.22
CMSS1-203ENST00000478909 CARD10Q9BWT7 1032 aa7.4□□□□□ -1.22
CMSS1-203ENST00000478909 ZNF358Q9NW07 568 aa7.4□□□□□ -1.22
CMSS1-203ENST00000478909 C9orf78Q9NZ63 289 aaPredicted RBP7.4□□□□□ -1.22
CMSS1-203ENST00000478909 COL22A1Q8NFW1 1626 aaPredicted RBP7.4□□□□□ -1.22
CMSS1-203ENST00000478909 C5P01031 1676 aa7.4□□□□□ -1.23
CMSS1-203ENST00000478909 COL14A1Q05707 1796 aaKnown RBP7.39□□□□□ -1.23
CMSS1-203ENST00000478909 GLI3P10071 1580 aa7.39□□□□□ -1.23
CMSS1-203ENST00000478909 TNS2Q63HR2 1409 aa7.39□□□□□ -1.23
CMSS1-203ENST00000478909 RAD50Q92878 1312 aa7.39□□□□□ -1.23
CMSS1-203ENST00000478909 PNMA6EA0A0J9YXQ4 647 aa7.39□□□□□ -1.23
CMSS1-203ENST00000478909 USP17L3A6NCW0 530 aa7.39□□□□□ -1.23
CMSS1-203ENST00000478909 USP17L4A6NCW7 530 aa7.39□□□□□ -1.23
CMSS1-203ENST00000478909 GRM8O00222 908 aa7.39□□□□□ -1.23
CMSS1-203ENST00000478909 BACH1O14867 736 aa7.39□□□□□ -1.23
CMSS1-203ENST00000478909 ATP9BO43861 1147 aa7.39□□□□□ -1.23
CMSS1-203ENST00000478909 HSP90AA1P07900 732 aaKnown RBP7.39□□□□□ -1.23
CMSS1-203ENST00000478909 EIF2S2P20042 333 aaKnown RBP7.39□□□□□ -1.23
CMSS1-203ENST00000478909 ZC3H6P61129 1189 aaKnown RBP7.39□□□□□ -1.23
CMSS1-203ENST00000478909 XPCQ01831 940 aaPredicted RBP7.39□□□□□ -1.23
CMSS1-203ENST00000478909 USP17L2Q6R6M4 530 aa7.39□□□□□ -1.23
CMSS1-203ENST00000478909 USP17L1Q7RTZ2 530 aa7.39□□□□□ -1.23
CMSS1-203ENST00000478909 CNTROBQ8N137 903 aa7.39□□□□□ -1.23
CMSS1-203ENST00000478909 RUFY2Q8WXA3 655 aa7.39□□□□□ -1.23
CMSS1-203ENST00000478909 ABHD17AQ96GS6 310 aa7.39□□□□□ -1.23
CMSS1-203ENST00000478909 TEX13AQ9BXU3 409 aaPredicted RBP7.39□□□□□ -1.23
CMSS1-203ENST00000478909 PHAXQ9H814 394 aaKnown RBP7.39□□□□□ -1.23
CMSS1-203ENST00000478909 PRDM11Q9NQV5 511 aa7.39□□□□□ -1.23
CMSS1-203ENST00000478909 ENAMQ9NRM1 1142 aa7.39□□□□□ -1.23
CMSS1-203ENST00000478909 NDFIP2Q9NV92 336 aa7.39□□□□□ -1.23
CMSS1-203ENST00000478909 DNAAF2Q9NVR5 837 aaKnown RBP7.39□□□□□ -1.23
CMSS1-203ENST00000478909 SLAIN2Q9P270 581 aa7.39□□□□□ -1.23
CMSS1-203ENST00000478909 ATXN7L1Q9ULK2 861 aaPredicted RBP7.39□□□□□ -1.23
CMSS1-203ENST00000478909 AHDC1Q5TGY3 1603 aaPredicted RBP7.38□□□□□ -1.23
CMSS1-203ENST00000478909 ZBTB7CA1YPR0 619 aa7.38□□□□□ -1.23
CMSS1-203ENST00000478909 BNIP3LO60238 219 aa7.38□□□□□ -1.23
CMSS1-203ENST00000478909 SURF6O75683 361 aaKnown RBP7.38□□□□□ -1.23
CMSS1-203ENST00000478909 MAP2K3P46734 347 aa7.38□□□□□ -1.23
CMSS1-203ENST00000478909 RAB3GAP1Q15042 981 aa7.38□□□□□ -1.23
CMSS1-203ENST00000478909 L1TD1Q5T7N2 865 aaKnown RBP7.38□□□□□ -1.23
CMSS1-203ENST00000478909 TMEM151AQ8N4L1 468 aa7.38□□□□□ -1.23
CMSS1-203ENST00000478909 INTS4Q96HW7 963 aaKnown RBP7.38□□□□□ -1.23
CMSS1-203ENST00000478909 METTL22Q9BUU2 404 aaPredicted RBP7.38□□□□□ -1.23
CMSS1-203ENST00000478909 SLKQ9H2G2 1235 aaPredicted RBP7.38□□□□□ -1.23
CMSS1-203ENST00000478909 SCHIP1Q9P0W5 487 aaPredicted RBP7.38□□□□□ -1.23
CMSS1-203ENST00000478909 KIAA1024Q9UPX6 916 aa7.38□□□□□ -1.23
CMSS1-203ENST00000478909 EXOC6BQ9Y2D4 811 aa7.38□□□□□ -1.23
CMSS1-203ENST00000478909 MAP3K2Q9Y2U5 619 aa7.38□□□□□ -1.23
CMSS1-203ENST00000478909 ARFGEF2Q9Y6D5 1785 aa7.38□□□□□ -1.23
CMSS1-203ENST00000478909 CYP27B1O15528 508 aa7.37□□□□□ -1.23
CMSS1-203ENST00000478909 FRAT2O75474 233 aaPredicted RBP7.37□□□□□ -1.23
CMSS1-203ENST00000478909 GDF11O95390 407 aa7.37□□□□□ -1.23
CMSS1-203ENST00000478909 NBPF7P0C2Y1 421 aaPredicted RBP7.37□□□□□ -1.23
CMSS1-203ENST00000478909 IL2RBP14784 551 aa7.37□□□□□ -1.23
CMSS1-203ENST00000478909 CHMLP26374 656 aa7.37□□□□□ -1.23
CMSS1-203ENST00000478909 MCM4P33991 863 aa7.37□□□□□ -1.23
CMSS1-203ENST00000478909 IRS1P35568 1242 aa7.37□□□□□ -1.23
CMSS1-203ENST00000478909 EPHA4P54764 986 aa7.37□□□□□ -1.23
CMSS1-203ENST00000478909 CABP4P57796 275 aa7.37□□□□□ -1.23
CMSS1-203ENST00000478909 CLDN10P78369 228 aa7.37□□□□□ -1.23
CMSS1-203ENST00000478909 NLRP8Q86W28 1048 aa7.37□□□□□ -1.23
CMSS1-203ENST00000478909 TRIM50Q86XT4 487 aa7.37□□□□□ -1.23
CMSS1-203ENST00000478909 ZCRB1Q8TBF4 217 aaKnown RBP7.37□□□□□ -1.23
CMSS1-203ENST00000478909 KLRG1Q96E93 195 aa7.37□□□□□ -1.23
CMSS1-203ENST00000478909 SCARF2Q96GP6 870 aaPredicted RBP7.37□□□□□ -1.23
CMSS1-203ENST00000478909 OXCT2Q9BYC2 517 aaPredicted RBP7.37□□□□□ -1.23
CMSS1-203ENST00000478909 ZCCHC2Q9C0B9 1178 aaKnown RBP7.37□□□□□ -1.23
CMSS1-203ENST00000478909 LRRC4BQ9NT99 713 aa7.37□□□□□ -1.23
CMSS1-203ENST00000478909 ECHDC1Q9NTX5 307 aa7.37□□□□□ -1.23
CMSS1-203ENST00000478909 PARP3Q9Y6F1 533 aa7.37□□□□□ -1.23
CMSS1-203ENST00000478909 AFDNP55196 1824 aaKnown RBP7.36□□□□□ -1.23
CMSS1-203ENST00000478909 SPEF2Q9C093 1822 aa7.36□□□□□ -1.23
CMSS1-203ENST00000478909 NUP188Q5SRE5 1749 aa7.36□□□□□ -1.23
CMSS1-203ENST00000478909 SHANK3Q9BYB0 1731 aa7.36□□□□□ -1.23
CMSS1-203ENST00000478909 C2CD2LO14523 706 aa7.36□□□□□ -1.23
CMSS1-203ENST00000478909 OIP5O43482 229 aa7.36□□□□□ -1.23
CMSS1-203ENST00000478909 SMARCA5O60264 1052 aaPredicted RBP7.36□□□□□ -1.23
CMSS1-203ENST00000478909 FGFR3P22607 806 aa7.36□□□□□ -1.23
CMSS1-203ENST00000478909 FOXK2Q01167 660 aa7.36□□□□□ -1.23
CMSS1-203ENST00000478909 OS9Q13438 667 aaPredicted RBP7.36□□□□□ -1.23
CMSS1-203ENST00000478909 RABL6Q3YEC7 729 aaPredicted RBP7.36□□□□□ -1.23
CMSS1-203ENST00000478909 ARSJQ5FYB0 599 aaPredicted RBP7.36□□□□□ -1.23
CMSS1-203ENST00000478909 FIGNL1Q6PIW4 674 aa7.36□□□□□ -1.23
CMSS1-203ENST00000478909 C16orf71Q8IYS4 520 aaPredicted RBP7.36□□□□□ -1.23
CMSS1-203ENST00000478909 PLBD2Q8NHP8 589 aa7.36□□□□□ -1.23
CMSS1-203ENST00000478909 NEDD1Q8NHV4 660 aa7.36□□□□□ -1.23
CMSS1-203ENST00000478909 TPCN2Q8NHX9 752 aa7.36□□□□□ -1.23
CMSS1-203ENST00000478909 PI4K2BQ8TCG2 481 aa7.36□□□□□ -1.23
CMSS1-203ENST00000478909 GLMNQ92990 594 aa7.36□□□□□ -1.23
CMSS1-203ENST00000478909 EVI5LQ96CN4 794 aa7.36□□□□□ -1.23
CMSS1-203ENST00000478909 COPRSQ9NQ92 184 aa7.36□□□□□ -1.23
CMSS1-203ENST00000478909 ATG3Q9NT62 314 aa7.36□□□□□ -1.23
CMSS1-203ENST00000478909 ZDHHC3Q9NYG2 299 aa7.36□□□□□ -1.23
CMSS1-203ENST00000478909 PCDHGC4Q9Y5F7 938 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms