RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 TP53INP1Q96A56 240 aa6.47□□□□□ -1.37
SMARCA1-204ENST00000478420 ELMO3Q96BJ8 720 aa6.47□□□□□ -1.37
SMARCA1-204ENST00000478420 SPOCK3Q9BQ16 436 aa6.47□□□□□ -1.37
SMARCA1-204ENST00000478420 ATXN3LQ9H3M9 355 aa6.47□□□□□ -1.37
SMARCA1-204ENST00000478420 CRIM1Q9NZV1 1036 aa6.47□□□□□ -1.37
SMARCA1-204ENST00000478420 HIF3AQ9Y2N7 669 aa6.47□□□□□ -1.37
SMARCA1-204ENST00000478420 PCDHGB7Q9Y5F8 929 aa6.47□□□□□ -1.37
SMARCA1-204ENST00000478420 DCDC2CA8MYV0 355 aa6.46□□□□□ -1.38
SMARCA1-204ENST00000478420 DHX15O43143 795 aaKnown RBP6.46□□□□□ -1.38
SMARCA1-204ENST00000478420 BPNT1O95861 308 aa6.46□□□□□ -1.38
SMARCA1-204ENST00000478420 PROCP04070 461 aa6.46□□□□□ -1.38
SMARCA1-204ENST00000478420 ASPAP45381 313 aa6.46□□□□□ -1.38
SMARCA1-204ENST00000478420 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.46□□□□□ -1.38
SMARCA1-204ENST00000478420 BNC2Q6ZN30 1099 aaPredicted RBP6.46□□□□□ -1.38
SMARCA1-204ENST00000478420 HDXQ7Z353 690 aa6.46□□□□□ -1.38
SMARCA1-204ENST00000478420 GATAD2BQ8WXI9 593 aa6.46□□□□□ -1.38
SMARCA1-204ENST00000478420 MYRFLQ96LU7 910 aa6.46□□□□□ -1.38
SMARCA1-204ENST00000478420 FANCD2OSQ96PS1 177 aa6.46□□□□□ -1.38
SMARCA1-204ENST00000478420 YIPF2Q9BWQ6 316 aa6.46□□□□□ -1.38
SMARCA1-204ENST00000478420 PICK1Q9NRD5 415 aa6.46□□□□□ -1.38
SMARCA1-204ENST00000478420 TPSG1Q9NRR2 321 aa6.46□□□□□ -1.38
SMARCA1-204ENST00000478420 DDX41Q9UJV9 622 aaKnown RBP6.46□□□□□ -1.38
SMARCA1-204ENST00000478420 SUPT16HQ9Y5B9 1047 aaKnown RBP6.46□□□□□ -1.38
SMARCA1-204ENST00000478420 ACTL7BQ9Y614 415 aa6.46□□□□□ -1.38
SMARCA1-204ENST00000478420 SNCAIPQ9Y6H5 919 aa6.46□□□□□ -1.38
SMARCA1-204ENST00000478420 BMP3P12645 472 aa6.45□□□□□ -1.38
SMARCA1-204ENST00000478420 GARTP22102 1010 aa6.45□□□□□ -1.38
SMARCA1-204ENST00000478420 ERVK-24P63145 666 aa6.45□□□□□ -1.38
SMARCA1-204ENST00000478420 RPL6Q02878 288 aaKnown RBP6.45□□□□□ -1.38
SMARCA1-204ENST00000478420 DOC2BQ14184 412 aa6.45□□□□□ -1.38
SMARCA1-204ENST00000478420 INPP5AQ14642 412 aa6.45□□□□□ -1.38
SMARCA1-204ENST00000478420 WIPI1Q5MNZ9 446 aaPredicted RBP6.45□□□□□ -1.38
SMARCA1-204ENST00000478420 FBXL19Q6PCT2 694 aa6.45□□□□□ -1.38
SMARCA1-204ENST00000478420 LRFN4Q6PJG9 635 aa6.45□□□□□ -1.38
SMARCA1-204ENST00000478420 C12orf40Q86WS4 652 aa6.45□□□□□ -1.38
SMARCA1-204ENST00000478420 ZNF654Q8IZM8 581 aa6.45□□□□□ -1.38
SMARCA1-204ENST00000478420 ARMC10Q8N2F6 343 aa6.45□□□□□ -1.38
SMARCA1-204ENST00000478420 ZNF296Q8WUU4 475 aaPredicted RBP6.45□□□□□ -1.38
SMARCA1-204ENST00000478420 SPON2Q9BUD6 331 aa6.45□□□□□ -1.38
SMARCA1-204ENST00000478420 GSX1Q9H4S2 264 aaPredicted RBP6.45□□□□□ -1.38
SMARCA1-204ENST00000478420 PIDD1Q9HB75 910 aa6.45□□□□□ -1.38
SMARCA1-204ENST00000478420 ADAMTS1Q9UHI8 967 aa6.45□□□□□ -1.38
SMARCA1-204ENST00000478420 CSADQ9Y600 493 aa6.45□□□□□ -1.38
SMARCA1-204ENST00000478420 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.44□□□□□ -1.38
SMARCA1-204ENST00000478420 CILPO75339 1184 aa6.44□□□□□ -1.38
SMARCA1-204ENST00000478420 F13A1P00488 732 aa6.44□□□□□ -1.38
SMARCA1-204ENST00000478420 RXRBP28702 533 aa6.44□□□□□ -1.38
SMARCA1-204ENST00000478420 ERCC5P28715 1186 aaPredicted RBP6.44□□□□□ -1.38
SMARCA1-204ENST00000478420 RACK1P63244 317 aaKnown RBP6.44□□□□□ -1.38
SMARCA1-204ENST00000478420 SGO2Q562F6 1265 aa6.44□□□□□ -1.38
SMARCA1-204ENST00000478420 XP32Q5T750 250 aa6.44□□□□□ -1.38
SMARCA1-204ENST00000478420 KIAA0825Q8IV33 1275 aa6.44□□□□□ -1.38
SMARCA1-204ENST00000478420 FAM20CQ8IXL6 584 aa6.44□□□□□ -1.38
SMARCA1-204ENST00000478420 RNF214Q8ND24 703 aa6.44□□□□□ -1.38
SMARCA1-204ENST00000478420 PLPPR2Q96GM1 343 aa6.44□□□□□ -1.38
SMARCA1-204ENST00000478420 KCNF1Q9H3M0 494 aa6.44□□□□□ -1.38
SMARCA1-204ENST00000478420 KCNQ5Q9NR82 932 aa6.44□□□□□ -1.38
SMARCA1-204ENST00000478420 DISC1Q9NRI5 854 aa6.44□□□□□ -1.38
SMARCA1-204ENST00000478420 IGSF5Q9NSI5 407 aa6.44□□□□□ -1.38
SMARCA1-204ENST00000478420 FAM105AQ9NUU6 356 aa6.44□□□□□ -1.38
SMARCA1-204ENST00000478420 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.44□□□□□ -1.38
SMARCA1-204ENST00000478420 ROBO2Q9HCK4 1378 aa6.44□□□□□ -1.38
SMARCA1-204ENST00000478420 FAM221AA4D161 298 aa6.43□□□□□ -1.38
SMARCA1-204ENST00000478420 GREM1O60565 184 aa6.43□□□□□ -1.38
SMARCA1-204ENST00000478420 RNGTTO60942 597 aaKnown RBP6.43□□□□□ -1.38
SMARCA1-204ENST00000478420 RAB6AP20340 208 aa6.43□□□□□ -1.38
SMARCA1-204ENST00000478420 MAP4P27816 1152 aaKnown RBP6.43□□□□□ -1.38
SMARCA1-204ENST00000478420 MPP2Q14168 576 aa6.43□□□□□ -1.38
SMARCA1-204ENST00000478420 TTLL4Q14679 1199 aa6.43□□□□□ -1.38
SMARCA1-204ENST00000478420 PPM1JQ5JR12 505 aa6.43□□□□□ -1.38
SMARCA1-204ENST00000478420 CDPF1Q6NVV7 123 aa6.43□□□□□ -1.38
SMARCA1-204ENST00000478420 FAM196AQ6ZSG2 479 aa6.43□□□□□ -1.38
SMARCA1-204ENST00000478420 FBLIM1Q8WUP2 373 aa6.43□□□□□ -1.38
SMARCA1-204ENST00000478420 TGIF2Q9GZN2 237 aa6.43□□□□□ -1.38
SMARCA1-204ENST00000478420 PRAMEF27A3QJZ7 478 aa6.42□□□□□ -1.38
SMARCA1-204ENST00000478420 FANCGO15287 622 aa6.42□□□□□ -1.38
SMARCA1-204ENST00000478420 HCLS1P14317 486 aaPredicted RBP6.42□□□□□ -1.38
SMARCA1-204ENST00000478420 CDK8P49336 464 aa6.42□□□□□ -1.38
SMARCA1-204ENST00000478420 RING1Q06587 406 aa6.42□□□□□ -1.38
SMARCA1-204ENST00000478420 RAD51AP2Q09MP3 1159 aa6.42□□□□□ -1.38
SMARCA1-204ENST00000478420 PRR23CQ6ZRP0 262 aa6.42□□□□□ -1.38
SMARCA1-204ENST00000478420 BEND4Q6ZU67 534 aa6.42□□□□□ -1.38
SMARCA1-204ENST00000478420 CYFIP1Q7L576 1253 aa6.42□□□□□ -1.38
SMARCA1-204ENST00000478420 CLEC10AQ8IUN9 316 aa6.42□□□□□ -1.38
SMARCA1-204ENST00000478420 ACSS3Q9H6R3 686 aa6.42□□□□□ -1.38
SMARCA1-204ENST00000478420 CCSER2Q9H7U1 834 aa6.42□□□□□ -1.38
SMARCA1-204ENST00000478420 SSU72Q9NP77 194 aaKnown RBP6.42□□□□□ -1.38
SMARCA1-204ENST00000478420 STOML1Q9UBI4 398 aa6.42□□□□□ -1.38
SMARCA1-204ENST00000478420 RAXQ9Y2V3 346 aa6.42□□□□□ -1.38
SMARCA1-204ENST00000478420 FAM95CA0A1B0GW59 222 aa6.41□□□□□ -1.38
SMARCA1-204ENST00000478420 GFRA2O00451 464 aa6.41□□□□□ -1.38
SMARCA1-204ENST00000478420 TLR3O15455 904 aaKnown RBP6.41□□□□□ -1.38
SMARCA1-204ENST00000478420 H2AFB1P0C5Y9 115 aa6.41□□□□□ -1.38
SMARCA1-204ENST00000478420 H2AFB2P0C5Z0 115 aa6.41□□□□□ -1.38
SMARCA1-204ENST00000478420 APOBRQ0VD83 1088 aa6.41□□□□□ -1.38
SMARCA1-204ENST00000478420 MAP7Q14244 749 aa6.41□□□□□ -1.38
SMARCA1-204ENST00000478420 CWF19L2Q2TBE0 894 aaKnown RBP6.41□□□□□ -1.38
SMARCA1-204ENST00000478420 ZBTB37Q5TC79 503 aa6.41□□□□□ -1.38
SMARCA1-204ENST00000478420 PAOXQ6QHF9 649 aa6.41□□□□□ -1.38
SMARCA1-204ENST00000478420 SMYD4Q8IYR2 804 aaPredicted RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms