RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 DDX4Q9NQI0 724 aaKnown RBP12.46□□□□□ -0.41
HDAC6-222ENST00000478095 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.46□□□□□ -0.41
HDAC6-222ENST00000478095 RFX7Q2KHR2 1363 aa12.45□□□□□ -0.42
HDAC6-222ENST00000478095 CEP350Q5VT06 3117 aa12.45□□□□□ -0.42
HDAC6-222ENST00000478095 ZNF532Q9HCE3 1301 aa12.45□□□□□ -0.42
HDAC6-222ENST00000478095 RASSF10A6NK89 507 aa12.45□□□□□ -0.42
HDAC6-222ENST00000478095 UBE2Q2LH0YL09 131 aa12.45□□□□□ -0.42
HDAC6-222ENST00000478095 ERC2O15083 957 aa12.45□□□□□ -0.42
HDAC6-222ENST00000478095 GLRX3O76003 335 aaKnown RBP12.45□□□□□ -0.42
HDAC6-222ENST00000478095 BAG3O95817 575 aa12.45□□□□□ -0.42
HDAC6-222ENST00000478095 NEFLP07196 543 aa12.45□□□□□ -0.42
HDAC6-222ENST00000478095 DEFB115Q30KQ5 88 aa12.45□□□□□ -0.42
HDAC6-222ENST00000478095 SUPT20HL1Q3ZLR7 823 aa12.45□□□□□ -0.42
HDAC6-222ENST00000478095 FKBP1CQ5VVH2 108 aa12.45□□□□□ -0.42
HDAC6-222ENST00000478095 CYP4F22Q6NT55 531 aa12.45□□□□□ -0.42
HDAC6-222ENST00000478095 FAM83AQ86UY5 434 aa12.45□□□□□ -0.42
HDAC6-222ENST00000478095 TEX11Q8IYF3 940 aa12.45□□□□□ -0.42
HDAC6-222ENST00000478095 KLRG1Q96E93 195 aa12.45□□□□□ -0.42
HDAC6-222ENST00000478095 IDI2Q9BXS1 227 aa12.45□□□□□ -0.42
HDAC6-222ENST00000478095 VEGFBP49765 207 aa12.44□□□□□ -0.42
HDAC6-222ENST00000478095 PDE1AP54750 535 aa12.44□□□□□ -0.42
HDAC6-222ENST00000478095 ARMC9Q7Z3E5 817 aa12.44□□□□□ -0.42
HDAC6-222ENST00000478095 ZSCAN29Q8IWY8 852 aaPredicted RBP12.44□□□□□ -0.42
HDAC6-222ENST00000478095 FAM151AQ8WW52 585 aa12.44□□□□□ -0.42
HDAC6-222ENST00000478095 ANGEL1Q9UNK9 670 aaKnown RBP12.44□□□□□ -0.42
HDAC6-222ENST00000478095 AKAP11Q9UKA4 1901 aa12.44□□□□□ -0.42
HDAC6-222ENST00000478095 TCRBV5S4A2TA0A5A2 114 aa12.43□□□□□ -0.42
HDAC6-222ENST00000478095 IGSF3O75054 1194 aa12.43□□□□□ -0.42
HDAC6-222ENST00000478095 ADD2P35612 726 aa12.43□□□□□ -0.42
HDAC6-222ENST00000478095 FKBP1BP68106 108 aa12.43□□□□□ -0.42
HDAC6-222ENST00000478095 GSE1Q14687 1217 aa12.43□□□□□ -0.42
HDAC6-222ENST00000478095 MIGA2Q7L4E1 593 aa12.43□□□□□ -0.42
HDAC6-222ENST00000478095 MAPKAPK5Q8IW41 473 aa12.43□□□□□ -0.42
HDAC6-222ENST00000478095 CAPNS2Q96L46 248 aa12.43□□□□□ -0.42
HDAC6-222ENST00000478095 DCBLD2Q96PD2 775 aa12.43□□□□□ -0.42
HDAC6-222ENST00000478095 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.43□□□□□ -0.425e-11■■■■□ 21.8
HDAC6-222ENST00000478095 STAP2Q9UGK3 403 aa12.43□□□□□ -0.42
HDAC6-222ENST00000478095 MAGEB6P1A0A0J9YX57 407 aa12.42□□□□□ -0.42
HDAC6-222ENST00000478095 DDTLA6NHG4 134 aaPredicted RBP12.42□□□□□ -0.42
HDAC6-222ENST00000478095 PPP1R12BO60237 982 aaPredicted RBP12.42□□□□□ -0.42
HDAC6-222ENST00000478095 ENTPD3O75355 529 aa12.42□□□□□ -0.42
HDAC6-222ENST00000478095 USP2O75604 605 aaPredicted RBP12.42□□□□□ -0.42
HDAC6-222ENST00000478095 SLURP2P0DP57 97 aa12.42□□□□□ -0.42
HDAC6-222ENST00000478095 PLCG2P16885 1265 aa12.42□□□□□ -0.42
HDAC6-222ENST00000478095 ZNF157P51786 506 aaPredicted RBP12.42□□□□□ -0.42
HDAC6-222ENST00000478095 PPP4CP60510 307 aa12.42□□□□□ -0.42
HDAC6-222ENST00000478095 RGMBQ6NW40 437 aa12.42□□□□□ -0.42
HDAC6-222ENST00000478095 SH3BP5LQ7L8J4 393 aa12.42□□□□□ -0.42
HDAC6-222ENST00000478095 PLEKHM2Q8IWE5 1019 aa12.42□□□□□ -0.42
HDAC6-222ENST00000478095 KBTBD3Q8NAB2 608 aa12.42□□□□□ -0.42
HDAC6-222ENST00000478095 TGFBRAP1Q8WUH2 860 aa12.42□□□□□ -0.42
HDAC6-222ENST00000478095 CSRNP1Q96S65 589 aa12.42□□□□□ -0.42
HDAC6-222ENST00000478095 RIOK1Q9BRS2 568 aaKnown RBP12.42□□□□□ -0.42
HDAC6-222ENST00000478095 MAST2Q6P0Q8 1798 aa12.42□□□□□ -0.42
HDAC6-222ENST00000478095 RPAP1Q9BWH6 1393 aaPredicted RBP12.42□□□□□ -0.42
HDAC6-222ENST00000478095 FLT1P17948 1338 aa12.41□□□□□ -0.42
HDAC6-222ENST00000478095 WDR33Q9C0J8 1336 aaKnown RBP12.41□□□□□ -0.42
HDAC6-222ENST00000478095 GALR2O43603 387 aaPredicted RBP12.41□□□□□ -0.42
HDAC6-222ENST00000478095 AOC2O75106 756 aa12.41□□□□□ -0.42
HDAC6-222ENST00000478095 MBD4O95243 580 aa12.41□□□□□ -0.42
HDAC6-222ENST00000478095 PDE4AP27815 886 aa12.41□□□□□ -0.42
HDAC6-222ENST00000478095 IREB2P48200 963 aaKnown RBP12.41□□□□□ -0.42
HDAC6-222ENST00000478095 SLC4A8Q2Y0W8 1093 aa12.41□□□□□ -0.42
HDAC6-222ENST00000478095 ZSCAN25Q6NSZ9 544 aa12.41□□□□□ -0.42
HDAC6-222ENST00000478095 LCORLQ8N3X6 602 aa12.41□□□□□ -0.42
HDAC6-222ENST00000478095 HHIPL1Q96JK4 782 aa12.41□□□□□ -0.42
HDAC6-222ENST00000478095 CLMNQ96JQ2 1002 aa12.41□□□□□ -0.42
HDAC6-222ENST00000478095 FSD1Q9BTV5 496 aa12.41□□□□□ -0.42
HDAC6-222ENST00000478095 OSBPL5Q9H0X9 879 aaPredicted RBP12.41□□□□□ -0.42
HDAC6-222ENST00000478095 ARMT1Q9H993 441 aa12.41□□□□□ -0.42
HDAC6-222ENST00000478095 SAP30BPQ9UHR5 308 aaKnown RBP12.41□□□□□ -0.42
HDAC6-222ENST00000478095 PAPPA2Q9BXP8 1791 aa12.41□□□□□ -0.42
HDAC6-222ENST00000478095 ECE1P42892 770 aa12.4□□□□□ -0.42
HDAC6-222ENST00000478095 USP5P45974 858 aa12.4□□□□□ -0.42
HDAC6-222ENST00000478095 MKRN3Q13064 507 aaKnown RBP12.4□□□□□ -0.42
HDAC6-222ENST00000478095 UBE3CQ15386 1083 aa12.4□□□□□ -0.42
HDAC6-222ENST00000478095 MAP3K11Q16584 847 aa12.4□□□□□ -0.42
HDAC6-222ENST00000478095 LDLRAD1Q5T700 205 aa12.4□□□□□ -0.42
HDAC6-222ENST00000478095 TMED8Q6PL24 325 aaPredicted RBP12.4□□□□□ -0.42
HDAC6-222ENST00000478095 KIF12Q96FN5 646 aa12.4□□□□□ -0.42
HDAC6-222ENST00000478095 PUS7LQ9H0K6 701 aaKnown RBP12.4□□□□□ -0.42
HDAC6-222ENST00000478095 ECM29Q5VYK3 1845 aa12.39□□□□□ -0.43
HDAC6-222ENST00000478095 FAM196BA6NMK8 535 aa12.39□□□□□ -0.43
HDAC6-222ENST00000478095 FAM155AB1AL88 458 aaPredicted RBP12.39□□□□□ -0.43
HDAC6-222ENST00000478095 TRIM6-TRIM34B2RNG4 842 aa12.39□□□□□ -0.43
HDAC6-222ENST00000478095 RNF113AO15541 343 aaKnown RBP12.39□□□□□ -0.43
HDAC6-222ENST00000478095 SLC10A3P09131 477 aa12.39□□□□□ -0.43
HDAC6-222ENST00000478095 DCAF15Q66K64 600 aa12.39□□□□□ -0.43
HDAC6-222ENST00000478095 RASAL3Q86YV0 1011 aa12.39□□□□□ -0.43
HDAC6-222ENST00000478095 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.39□□□□□ -0.43
HDAC6-222ENST00000478095 SDR42E1Q8WUS8 393 aa12.39□□□□□ -0.43
HDAC6-222ENST00000478095 HOOK2Q96ED9 719 aa12.39□□□□□ -0.43
HDAC6-222ENST00000478095 WRNIP1Q96S55 665 aa12.39□□□□□ -0.43
HDAC6-222ENST00000478095 ZIC5Q96T25 663 aa12.39□□□□□ -0.43
HDAC6-222ENST00000478095 ZNF341Q9BYN7 854 aa12.39□□□□□ -0.43
HDAC6-222ENST00000478095 PALD1Q9ULE6 856 aa12.39□□□□□ -0.43
HDAC6-222ENST00000478095 POLR2AP24928 1970 aaKnown RBP12.39□□□□□ -0.43
HDAC6-222ENST00000478095 ATRNL1Q5VV63 1379 aa12.39□□□□□ -0.43
HDAC6-222ENST00000478095 MYH2Q9UKX2 1941 aa12.39□□□□□ -0.43
HDAC6-222ENST00000478095 PRKAB2O43741 272 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 138.2 ms