RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 ATRNL1Q5VV63 1379 aa14.43□□□□□ -0.1
VARS2-208ENST00000477052 IPO8O15397 1037 aaKnown RBP14.42□□□□□ -0.1
VARS2-208ENST00000477052 CYP2C8P10632 490 aa14.42□□□□□ -0.1
VARS2-208ENST00000477052 MVPQ14764 893 aaKnown RBP14.42□□□□□ -0.1
VARS2-208ENST00000477052 NOL9Q5SY16 702 aaKnown RBP14.42□□□□□ -0.1
VARS2-208ENST00000477052 GPAT2Q6NUI2 795 aa14.42□□□□□ -0.1
VARS2-208ENST00000477052 C17orf99Q6UX52 265 aa14.42□□□□□ -0.1
VARS2-208ENST00000477052 ZGPATQ8N5A5 531 aaKnown RBP14.42□□□□□ -0.1
VARS2-208ENST00000477052 IDI2Q9BXS1 227 aa14.42□□□□□ -0.1
VARS2-208ENST00000477052 SNRKQ9NRH2 765 aa14.42□□□□□ -0.1
VARS2-208ENST00000477052 KCNH4Q9UQ05 1017 aa14.42□□□□□ -0.1
VARS2-208ENST00000477052 ZHX2Q9Y6X8 837 aa14.42□□□□□ -0.1
VARS2-208ENST00000477052 RFX7Q2KHR2 1363 aa14.42□□□□□ -0.1
VARS2-208ENST00000477052 MROH7-TTC4A0A0A0MT08 1334 aa14.41□□□□□ -0.1
VARS2-208ENST00000477052 DOCK2Q92608 1830 aa14.41□□□□□ -0.1
VARS2-208ENST00000477052 RHBDL3P58872 404 aa14.41□□□□□ -0.1
VARS2-208ENST00000477052 G3BP1Q13283 466 aaKnown RBP eCLIP14.41□□□□□ -0.1
VARS2-208ENST00000477052 ERICH6Q7L0X2 663 aa14.41□□□□□ -0.1
VARS2-208ENST00000477052 ANKRD23Q86SG2 305 aa14.41□□□□□ -0.1
VARS2-208ENST00000477052 MIER1Q8N108 512 aa14.41□□□□□ -0.1
VARS2-208ENST00000477052 SPATA5Q8NB90 893 aa14.41□□□□□ -0.1
VARS2-208ENST00000477052 TRIM47Q96LD4 638 aa14.41□□□□□ -0.1
VARS2-208ENST00000477052 ENTPD3O75355 529 aa14.4□□□□□ -0.1
VARS2-208ENST00000477052 PTPRAP18433 802 aa14.4□□□□□ -0.1
VARS2-208ENST00000477052 MCAMP43121 646 aa14.4□□□□□ -0.1
VARS2-208ENST00000477052 PSMC4P43686 418 aa14.4□□□□□ -0.1
VARS2-208ENST00000477052 HNRNPUQ00839 825 aaKnown RBP eCLIP14.4□□□□□ -0.1
VARS2-208ENST00000477052 KIF22Q14807 665 aa14.4□□□□□ -0.1
VARS2-208ENST00000477052 SLC4A8Q2Y0W8 1093 aa14.4□□□□□ -0.1
VARS2-208ENST00000477052 SPTY2D1Q68D10 685 aaPredicted RBP14.4□□□□□ -0.1
VARS2-208ENST00000477052 GADL1Q6ZQY3 521 aa14.4□□□□□ -0.1
VARS2-208ENST00000477052 SCYL3Q8IZE3 742 aa14.4□□□□□ -0.1
VARS2-208ENST00000477052 TMEM106CQ9BVX2 250 aa14.4□□□□□ -0.1
VARS2-208ENST00000477052 PICK1Q9NRD5 415 aa14.4□□□□□ -0.1
VARS2-208ENST00000477052 RAI14Q9P0K7 980 aa14.4□□□□□ -0.1
VARS2-208ENST00000477052 ADGRA2Q96PE1 1338 aa14.4□□□□□ -0.1
VARS2-208ENST00000477052 GPR75-ASB3A0A0A6YYF3 556 aa14.39□□□□□ -0.11
VARS2-208ENST00000477052 TRIM75PA6NK02 468 aa14.39□□□□□ -0.11
VARS2-208ENST00000477052 FMNL1O95466 1100 aaPredicted RBP14.39□□□□□ -0.11
VARS2-208ENST00000477052 ARHGEF6Q15052 776 aa14.39□□□□□ -0.11
VARS2-208ENST00000477052 ZKSCAN2Q63HK3 967 aa14.39□□□□□ -0.11
VARS2-208ENST00000477052 NSUN4Q96CB9 384 aaKnown RBP14.39□□□□□ -0.11
VARS2-208ENST00000477052 FAM163AQ96GL9 167 aaPredicted RBP14.39□□□□□ -0.11
VARS2-208ENST00000477052 ZCCHC17Q9NP64 241 aaKnown RBP14.39□□□□□ -0.11
VARS2-208ENST00000477052 PDS5AQ29RF7 1337 aaKnown RBP14.39□□□□□ -0.11
VARS2-208ENST00000477052 RLBP1P12271 317 aa14.38□□□□□ -0.11
VARS2-208ENST00000477052 OSBPP22059 807 aa14.38□□□□□ -0.11
VARS2-208ENST00000477052 ARID4AP29374 1257 aaPredicted RBP14.38□□□□□ -0.11
VARS2-208ENST00000477052 MTFR1Q15390 333 aa14.38□□□□□ -0.11
VARS2-208ENST00000477052 NBPF11Q86T75 865 aa14.38□□□□□ -0.11
VARS2-208ENST00000477052 SLF2Q8IX21 1173 aa14.38□□□□□ -0.11
VARS2-208ENST00000477052 DBNDD2Q9BQY9 259 aa14.38□□□□□ -0.11
VARS2-208ENST00000477052 AFG3L2Q9Y4W6 797 aa14.38□□□□□ -0.11
VARS2-208ENST00000477052 RBBP6Q7Z6E9 1792 aaKnown RBP14.37□□□□□ -0.11
VARS2-208ENST00000477052 A0A0G2JLL6 359 aaPredicted RBP14.37□□□□□ -0.11
VARS2-208ENST00000477052 CXCL11O14625 94 aa14.37□□□□□ -0.11
VARS2-208ENST00000477052 OS9Q13438 667 aaPredicted RBP14.37□□□□□ -0.11
VARS2-208ENST00000477052 RRP1BQ14684 758 aaKnown RBP14.37□□□□□ -0.11
VARS2-208ENST00000477052 PRRT2Q7Z6L0 340 aaPredicted RBP14.37□□□□□ -0.11
VARS2-208ENST00000477052 SH3RF3Q8TEJ3 882 aaPredicted RBP14.37□□□□□ -0.11
VARS2-208ENST00000477052 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.37□□□□□ -0.11
VARS2-208ENST00000477052 LRP2BPQ9P2M1 347 aa14.37□□□□□ -0.11
VARS2-208ENST00000477052 ZBTB22O15209 634 aa14.36□□□□□ -0.11
VARS2-208ENST00000477052 SURF6O75683 361 aaKnown RBP14.36□□□□□ -0.11
VARS2-208ENST00000477052 MAP3K10Q02779 954 aa14.36□□□□□ -0.11
VARS2-208ENST00000477052 POLA2Q14181 598 aa14.36□□□□□ -0.11
VARS2-208ENST00000477052 TNNI3KQ59H18 835 aa14.36□□□□□ -0.11
VARS2-208ENST00000477052 TTC39AQ5SRH9 613 aa14.36□□□□□ -0.11
VARS2-208ENST00000477052 ITPRIPQ8IWB1 547 aa14.36□□□□□ -0.11
VARS2-208ENST00000477052 TEX11Q8IYF3 940 aa14.36□□□□□ -0.11
VARS2-208ENST00000477052 PARK7Q99497 189 aaKnown RBP14.36□□□□□ -0.11
VARS2-208ENST00000477052 TLR7Q9NYK1 1049 aaKnown RBP14.36□□□□□ -0.11
VARS2-208ENST00000477052 SRRDQ9UH36 339 aa14.36□□□□□ -0.11
VARS2-208ENST00000477052 GABRQQ9UN88 632 aa14.36□□□□□ -0.11
VARS2-208ENST00000477052 FPGT-TNNI3KV9GXZ4 949 aa14.36□□□□□ -0.11
VARS2-208ENST00000477052 CTNND1O60716 968 aaKnown RBP14.35□□□□□ -0.11
VARS2-208ENST00000477052 BCRP11274 1271 aa14.35□□□□□ -0.11
VARS2-208ENST00000477052 GSTO1P78417 241 aa14.35□□□□□ -0.11
VARS2-208ENST00000477052 ATP8B2P98198 1209 aa14.35□□□□□ -0.11
VARS2-208ENST00000477052 PRKCZQ05513 592 aa14.35□□□□□ -0.11
VARS2-208ENST00000477052 SHROOM1Q2M3G4 852 aaPredicted RBP14.35□□□□□ -0.11
VARS2-208ENST00000477052 TREML2Q5T2D2 321 aa14.35□□□□□ -0.11
VARS2-208ENST00000477052 ADGRA1Q86SQ6 560 aa14.35□□□□□ -0.11
VARS2-208ENST00000477052 RAET1EQ8TD07 263 aa14.35□□□□□ -0.11
VARS2-208ENST00000477052 OSBPL5Q9H0X9 879 aaPredicted RBP14.35□□□□□ -0.11
VARS2-208ENST00000477052 AATFQ9NY61 560 aaKnown RBP eCLIP14.35□□□□□ -0.11
VARS2-208ENST00000477052 NDUFB9Q9Y6M9 179 aa14.35□□□□□ -0.11
VARS2-208ENST00000477052 PHIPQ8WWQ0 1821 aa14.35□□□□□ -0.11
VARS2-208ENST00000477052 DOCK1Q14185 1865 aa14.35□□□□□ -0.11
VARS2-208ENST00000477052 MYPNQ86TC9 1320 aa14.35□□□□□ -0.11
VARS2-208ENST00000477052 CYP2E1P05181 493 aaPredicted RBP14.34□□□□□ -0.11
VARS2-208ENST00000477052 LDHCP07864 332 aa14.34□□□□□ -0.11
VARS2-208ENST00000477052 UQCRFS1P1P0C7P4 283 aa14.34□□□□□ -0.11
VARS2-208ENST00000477052 FASTKD5Q7L8L6 764 aaKnown RBP14.34□□□□□ -0.11
VARS2-208ENST00000477052 FTSJ3Q8IY81 847 aaKnown RBP14.34□□□□□ -0.11
VARS2-208ENST00000477052 SSH3Q8TE77 659 aa14.34□□□□□ -0.11
VARS2-208ENST00000477052 CCDC8Q9H0W5 538 aaPredicted RBP14.34□□□□□ -0.11
VARS2-208ENST00000477052 PIH1D3Q9NQM4 214 aaKnown RBP14.34□□□□□ -0.11
VARS2-208ENST00000477052 BIN2Q9UBW5 565 aaPredicted RBP14.34□□□□□ -0.11
VARS2-208ENST00000477052 MYO5AQ9Y4I1 1855 aaKnown RBP14.33□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms