RNA–Protein interactions for RNA: ENST00000476994.1

SREBF1-211, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-211	ENST00000476994	RAI14	Q9P0K7	980 aa		21.28	■■□□□ 1
SREBF1-211	ENST00000476994	SPDYE2B	A6NHP3	402 aa		21.27	■■□□□ 1
SREBF1-211	ENST00000476994	ZFY	P08048	801 aa	Predicted RBP	21.27	■■□□□ 1
SREBF1-211	ENST00000476994	SPDYE6	P0CI01	402 aa		21.27	■■□□□ 1
SREBF1-211	ENST00000476994	PKN2	Q16513	984 aa	Known RBP	21.27	■■□□□ 1
SREBF1-211	ENST00000476994	SLC9C2	Q5TAH2	1124 aa		21.27	■■□□□ 1
SREBF1-211	ENST00000476994	TMED8	Q6PL24	325 aa	Predicted RBP	21.27	■■□□□ 1
SREBF1-211	ENST00000476994	MAGEB6	Q8N7X4	407 aa		21.27	■■□□□ 1
SREBF1-211	ENST00000476994	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	21.27	■■□□□ 1	2e-10	■■□□□ 13.3
SREBF1-211	ENST00000476994	IL25	Q9H293	177 aa		21.27	■■□□□ 1
SREBF1-211	ENST00000476994	GAK	O14976	1311 aa		21.27	■□□□□ 0.99
SREBF1-211	ENST00000476994	ZNF532	Q9HCE3	1301 aa		21.27	■□□□□ 0.99
SREBF1-211	ENST00000476994		A0A0D9SFI3	127 aa		21.26	■□□□□ 0.99
SREBF1-211	ENST00000476994	CLRN2	A0PK11	232 aa		21.26	■□□□□ 0.99
SREBF1-211	ENST00000476994	ALDH1A1	P00352	501 aa		21.26	■□□□□ 0.99
SREBF1-211	ENST00000476994	NMI	Q13287	307 aa	Predicted RBP	21.26	■□□□□ 0.99
SREBF1-211	ENST00000476994	DIXDC1	Q155Q3	683 aa		21.26	■□□□□ 0.99
SREBF1-211	ENST00000476994	C8orf34	Q49A92	452 aa		21.26	■□□□□ 0.99
SREBF1-211	ENST00000476994	FAM163A	Q96GL9	167 aa	Predicted RBP	21.26	■□□□□ 0.99
SREBF1-211	ENST00000476994	FAM227B	Q96M60	508 aa		21.26	■□□□□ 0.99
SREBF1-211	ENST00000476994	TTF2	Q9UNY4	1162 aa	Known RBP	21.26	■□□□□ 0.99
SREBF1-211	ENST00000476994	UNCX	A6NJT0	531 aa		21.25	■□□□□ 0.99
SREBF1-211	ENST00000476994	TBC1D8	O95759	1140 aa		21.25	■□□□□ 0.99
SREBF1-211	ENST00000476994	IREB2	P48200	963 aa	Known RBP	21.25	■□□□□ 0.99
SREBF1-211	ENST00000476994	INHBE	P58166	350 aa		21.25	■□□□□ 0.99
SREBF1-211	ENST00000476994	LDLRAD1	Q5T700	205 aa		21.25	■□□□□ 0.99
SREBF1-211	ENST00000476994	ZSCAN25	Q6NSZ9	544 aa		21.25	■□□□□ 0.99
SREBF1-211	ENST00000476994	APPBP2	Q92624	585 aa		21.25	■□□□□ 0.99
SREBF1-211	ENST00000476994	OSBP2	Q969R2	916 aa		21.25	■□□□□ 0.99
SREBF1-211	ENST00000476994	MRI	Q9BWK5	157 aa		21.25	■□□□□ 0.99
SREBF1-211	ENST00000476994	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	21.25	■□□□□ 0.99
SREBF1-211	ENST00000476994	BAZ2A	Q9UIF9	1905 aa	Known RBP	21.25	■□□□□ 0.99
SREBF1-211	ENST00000476994	MAST3	O60307	1309 aa		21.25	■□□□□ 0.99
SREBF1-211	ENST00000476994	DDX60L	Q5H9U9	1706 aa	Known RBP	21.24	■□□□□ 0.99
SREBF1-211	ENST00000476994	MANSC4	A6NHS7	340 aa	Predicted RBP	21.24	■□□□□ 0.99
SREBF1-211	ENST00000476994	HIP1	O00291	1037 aa		21.24	■□□□□ 0.99
SREBF1-211	ENST00000476994	HDLBP	Q00341	1268 aa	Known RBP	21.24	■□□□□ 0.99
SREBF1-211	ENST00000476994	NOM1	Q5C9Z4	860 aa	Known RBP	21.24	■□□□□ 0.99
SREBF1-211	ENST00000476994	SPRYD7	Q5W111	196 aa		21.24	■□□□□ 0.99
SREBF1-211	ENST00000476994	NAA16	Q6N069	864 aa	Predicted RBP	21.24	■□□□□ 0.99
SREBF1-211	ENST00000476994	DZIP1	Q86YF9	867 aa	Known RBP	21.24	■□□□□ 0.99
SREBF1-211	ENST00000476994	PRMT6	Q96LA8	375 aa	Predicted RBP	21.24	■□□□□ 0.99
SREBF1-211	ENST00000476994	SEC62	Q99442	399 aa	Known RBP	21.24	■□□□□ 0.99
SREBF1-211	ENST00000476994	SERPINA10	Q9UK55	444 aa		21.24	■□□□□ 0.99
SREBF1-211	ENST00000476994	MROH7-TTC4	A0A0A0MT08	1334 aa		21.24	■□□□□ 0.99
SREBF1-211	ENST00000476994	ZBTB48	P10074	688 aa	Predicted RBP	21.23	■□□□□ 0.99
SREBF1-211	ENST00000476994	CYP7A1	P22680	504 aa		21.23	■□□□□ 0.99
SREBF1-211	ENST00000476994	MAP3K11	Q16584	847 aa		21.23	■□□□□ 0.99
SREBF1-211	ENST00000476994	LRRFIP1	Q32MZ4	808 aa	Known RBP	21.23	■□□□□ 0.99
SREBF1-211	ENST00000476994	ZNF296	Q8WUU4	475 aa	Predicted RBP	21.23	■□□□□ 0.99
SREBF1-211	ENST00000476994	PUS7L	Q9H0K6	701 aa	Known RBP	21.23	■□□□□ 0.99
SREBF1-211	ENST00000476994	DAGLA	Q9Y4D2	1042 aa		21.23	■□□□□ 0.99
SREBF1-211	ENST00000476994	NAV1	Q8NEY1	1877 aa		21.23	■□□□□ 0.99
SREBF1-211	ENST00000476994	MYH1	P12882	1939 aa		21.22	■□□□□ 0.99
SREBF1-211	ENST00000476994		M0R2C6	588 aa		21.22	■□□□□ 0.99
SREBF1-211	ENST00000476994	GPR25	O00155	361 aa		21.22	■□□□□ 0.99
SREBF1-211	ENST00000476994	TNNI2	P48788	182 aa		21.22	■□□□□ 0.99
SREBF1-211	ENST00000476994	HHIPL2	Q6UWX4	724 aa		21.22	■□□□□ 0.99
SREBF1-211	ENST00000476994	RIOK1	Q9BRS2	568 aa	Known RBP	21.22	■□□□□ 0.99
SREBF1-211	ENST00000476994	HELLS	Q9NRZ9	838 aa		21.22	■□□□□ 0.99
SREBF1-211	ENST00000476994	DIAPH3	Q9NSV4	1193 aa		21.22	■□□□□ 0.99
SREBF1-211	ENST00000476994	LAMB1	P07942	1786 aa		21.22	■□□□□ 0.99
SREBF1-211	ENST00000476994	LAMA4	Q16363	1823 aa		21.21	■□□□□ 0.99
SREBF1-211	ENST00000476994	GPR75-ASB3	A0A0A6YYF3	556 aa		21.21	■□□□□ 0.99
SREBF1-211	ENST00000476994	SGSM2	O43147	1006 aa		21.21	■□□□□ 0.99
SREBF1-211	ENST00000476994	CRK	P46108	304 aa		21.21	■□□□□ 0.99
SREBF1-211	ENST00000476994	GSTO1	P78417	241 aa		21.21	■□□□□ 0.99
SREBF1-211	ENST00000476994	OTUD7B	Q6GQQ9	843 aa		21.21	■□□□□ 0.99
SREBF1-211	ENST00000476994	CWC27	Q6UX04	472 aa	Known RBP	21.21	■□□□□ 0.99
SREBF1-211	ENST00000476994	ZNF589	Q86UQ0	364 aa	Predicted RBP	21.21	■□□□□ 0.99
SREBF1-211	ENST00000476994	ESYT1	Q9BSJ8	1104 aa		21.21	■□□□□ 0.99
SREBF1-211	ENST00000476994	PCDHAC2	Q9Y5I4	1007 aa		21.21	■□□□□ 0.99
SREBF1-211	ENST00000476994	RAD50	Q92878	1312 aa		21.21	■□□□□ 0.99
SREBF1-211	ENST00000476994	FKTN	O75072	461 aa		21.2	■□□□□ 0.98
SREBF1-211	ENST00000476994	PPP4C	P60510	307 aa		21.2	■□□□□ 0.98
SREBF1-211	ENST00000476994	RASA3	Q14644	834 aa		21.2	■□□□□ 0.98
SREBF1-211	ENST00000476994	ANKRD13A	Q8IZ07	590 aa		21.2	■□□□□ 0.98
SREBF1-211	ENST00000476994	ZDHHC15	Q96MV8	337 aa		21.2	■□□□□ 0.98
SREBF1-211	ENST00000476994	CFHR5	Q9BXR6	569 aa		21.2	■□□□□ 0.98
SREBF1-211	ENST00000476994	FZD1	Q9UP38	647 aa		21.2	■□□□□ 0.98
SREBF1-211	ENST00000476994	LDHC	P07864	332 aa		21.19	■□□□□ 0.98
SREBF1-211	ENST00000476994	SPDYE2	Q495Y8	402 aa		21.19	■□□□□ 0.98
SREBF1-211	ENST00000476994	MCMDC2	Q4G0Z9	681 aa		21.19	■□□□□ 0.98
SREBF1-211	ENST00000476994	NBPF12	Q5TAG4	269 aa	Predicted RBP	21.19	■□□□□ 0.98
SREBF1-211	ENST00000476994	APOBEC3H	Q6NTF7	200 aa	Known RBP	21.19	■□□□□ 0.98
SREBF1-211	ENST00000476994	CCDC129	Q6ZRS4	1044 aa		21.19	■□□□□ 0.98
SREBF1-211	ENST00000476994	TEKT1	Q969V4	418 aa		21.19	■□□□□ 0.98
SREBF1-211	ENST00000476994	WNK4	Q96J92	1243 aa		21.19	■□□□□ 0.98
SREBF1-211	ENST00000476994	ZNF70	Q9UC06	446 aa	Predicted RBP	21.19	■□□□□ 0.98
SREBF1-211	ENST00000476994	PDE4DIP	Q5VU43	2346 aa		21.18	■□□□□ 0.98
SREBF1-211	ENST00000476994	FOXP2	O15409	715 aa		21.18	■□□□□ 0.98
SREBF1-211	ENST00000476994	SOX10	P56693	466 aa		21.18	■□□□□ 0.98
SREBF1-211	ENST00000476994	DYNLL1	P63167	89 aa	Known RBP	21.18	■□□□□ 0.98
SREBF1-211	ENST00000476994	SLF2	Q8IX21	1173 aa		21.18	■□□□□ 0.98
SREBF1-211	ENST00000476994	LCORL	Q8N3X6	602 aa		21.18	■□□□□ 0.98
SREBF1-211	ENST00000476994	MIGA1	Q8NAN2	632 aa		21.18	■□□□□ 0.98
SREBF1-211	ENST00000476994	SSC5D	A1L4H1	1573 aa		21.18	■□□□□ 0.98
SREBF1-211	ENST00000476994	OTOF	Q9HC10	1997 aa		21.17	■□□□□ 0.98
SREBF1-211	ENST00000476994	GPAA1	O43292	621 aa		21.17	■□□□□ 0.98
SREBF1-211	ENST00000476994	MBD4	O95243	580 aa		21.17	■□□□□ 0.98

Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms