RNA–Protein interactions for RNA: ENST00000475835.2

LSM2-211, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 5

Gene LSM2, Length 211 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM2-211	ENST00000475835	BRAP	Q7Z569	592 aa		4.37	□□□□□ -1.71
LSM2-211	ENST00000475835	TADA2B	Q86TJ2	420 aa		4.37	□□□□□ -1.71
LSM2-211	ENST00000475835	SAPCD2	Q86UD0	394 aa		4.37	□□□□□ -1.71
LSM2-211	ENST00000475835	THEMIS	Q8N1K5	641 aa	Predicted RBP	4.37	□□□□□ -1.71
LSM2-211	ENST00000475835	ARL10	Q8N8L6	244 aa		4.37	□□□□□ -1.71
LSM2-211	ENST00000475835	KRI1	Q8N9T8	703 aa	Known RBP	4.37	□□□□□ -1.71
LSM2-211	ENST00000475835	NFATC2IP	Q8NCF5	419 aa		4.37	□□□□□ -1.71
LSM2-211	ENST00000475835	APPL2	Q8NEU8	664 aa		4.37	□□□□□ -1.71
LSM2-211	ENST00000475835	GAS2L2	Q8NHY3	880 aa		4.37	□□□□□ -1.71
LSM2-211	ENST00000475835	TMC2	Q8TDI7	906 aa		4.37	□□□□□ -1.71
LSM2-211	ENST00000475835	ARHGAP45	Q92619	1136 aa		4.37	□□□□□ -1.71
LSM2-211	ENST00000475835	CCDC114	Q96M63	670 aa		4.37	□□□□□ -1.71
LSM2-211	ENST00000475835	ZMAT2	Q96NC0	199 aa	Known RBP	4.37	□□□□□ -1.71
LSM2-211	ENST00000475835	SPAG5	Q96R06	1193 aa		4.37	□□□□□ -1.71
LSM2-211	ENST00000475835	FAM167B	Q9BTA0	163 aa		4.37	□□□□□ -1.71
LSM2-211	ENST00000475835	TNMD	Q9H2S6	317 aa		4.37	□□□□□ -1.71
LSM2-211	ENST00000475835	SYNC	Q9H7C4	482 aa		4.37	□□□□□ -1.71
LSM2-211	ENST00000475835	PLSCR2	Q9NRY7	297 aa		4.37	□□□□□ -1.71
LSM2-211	ENST00000475835	ARGLU1	Q9NWB6	273 aa	Predicted RBP	4.37	□□□□□ -1.71
LSM2-211	ENST00000475835	CLIC5	Q9NZA1	410 aa		4.37	□□□□□ -1.71
LSM2-211	ENST00000475835	FAM184B	Q9ULE4	1060 aa		4.37	□□□□□ -1.71
LSM2-211	ENST00000475835	TRAF3IP3	Q9Y228	551 aa		4.37	□□□□□ -1.71
LSM2-211	ENST00000475835	CARD8	Q9Y2G2	431 aa		4.37	□□□□□ -1.71
LSM2-211	ENST00000475835	MRPL11	Q9Y3B7	192 aa	Known RBP	4.37	□□□□□ -1.71
LSM2-211	ENST00000475835	DMRT2	Q9Y5R5	561 aa		4.37	□□□□□ -1.71
LSM2-211	ENST00000475835	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	4.37	□□□□□ -1.71
LSM2-211	ENST00000475835	MAPK8IP3	Q9UPT6	1336 aa		4.37	□□□□□ -1.71
LSM2-211	ENST00000475835	PLEKHH2	Q8IVE3	1493 aa		4.37	□□□□□ -1.71
LSM2-211	ENST00000475835	NLRP1	Q9C000	1473 aa		4.37	□□□□□ -1.71
LSM2-211	ENST00000475835	SHANK2	Q9UPX8	1470 aa		4.37	□□□□□ -1.71
LSM2-211	ENST00000475835	KDM5D	Q9BY66	1539 aa		4.36	□□□□□ -1.71
LSM2-211	ENST00000475835	DYTN	A2CJ06	578 aa		4.36	□□□□□ -1.71
LSM2-211	ENST00000475835		H0Y3Z8	333 aa		4.36	□□□□□ -1.71
LSM2-211	ENST00000475835	ABLIM1	O14639	778 aa		4.36	□□□□□ -1.71
LSM2-211	ENST00000475835	TRIM66	O15016	1216 aa		4.36	□□□□□ -1.71
LSM2-211	ENST00000475835	CYTH3	O43739	400 aa		4.36	□□□□□ -1.71
LSM2-211	ENST00000475835	ORC4	O43929	436 aa		4.36	□□□□□ -1.71
LSM2-211	ENST00000475835	EVI5	O60447	810 aa		4.36	□□□□□ -1.71
LSM2-211	ENST00000475835	MGEA5	O60502	916 aa		4.36	□□□□□ -1.71
LSM2-211	ENST00000475835	RNASEH2A	O75792	299 aa	Known RBP	4.36	□□□□□ -1.71
LSM2-211	ENST00000475835	ZNF189	O75820	626 aa	Predicted RBP	4.36	□□□□□ -1.71
LSM2-211	ENST00000475835	STAMBP	O95630	424 aa		4.36	□□□□□ -1.71
LSM2-211	ENST00000475835	HSPA1A	P0DMV8	641 aa	Known RBP	4.36	□□□□□ -1.71
LSM2-211	ENST00000475835	HSPA1B	P0DMV9	641 aa	Known RBP	4.36	□□□□□ -1.71
LSM2-211	ENST00000475835	CD9	P21926	228 aa		4.36	□□□□□ -1.71
LSM2-211	ENST00000475835	GPT	P24298	496 aa		4.36	□□□□□ -1.71
LSM2-211	ENST00000475835	TCF7	P36402	384 aa	Predicted RBP	4.36	□□□□□ -1.71
LSM2-211	ENST00000475835	PEX5	P50542	639 aa		4.36	□□□□□ -1.71
LSM2-211	ENST00000475835	TUBA4A	P68366	448 aa		4.36	□□□□□ -1.71
LSM2-211	ENST00000475835	PHEX	P78562	749 aa		4.36	□□□□□ -1.71
LSM2-211	ENST00000475835	ROR2	Q01974	943 aa	Known RBP	4.36	□□□□□ -1.71
LSM2-211	ENST00000475835	NUCB1	Q02818	461 aa		4.36	□□□□□ -1.71
LSM2-211	ENST00000475835	TUBA3C	Q13748	450 aa		4.36	□□□□□ -1.71
LSM2-211	ENST00000475835	COG2	Q14746	738 aa		4.36	□□□□□ -1.71
LSM2-211	ENST00000475835	PPP2R5B	Q15173	497 aa		4.36	□□□□□ -1.71
LSM2-211	ENST00000475835	SKIV2L	Q15477	1246 aa	Known RBP	4.36	□□□□□ -1.71
LSM2-211	ENST00000475835	RABL6	Q3YEC7	729 aa	Predicted RBP	4.36	□□□□□ -1.71
LSM2-211	ENST00000475835	USH1G	Q495M9	461 aa		4.36	□□□□□ -1.71
LSM2-211	ENST00000475835		Q4G0T1	1027 aa		4.36	□□□□□ -1.71
LSM2-211	ENST00000475835	NXN	Q6DKJ4	435 aa		4.36	□□□□□ -1.71
LSM2-211	ENST00000475835	POTED	Q86YR6	584 aa		4.36	□□□□□ -1.71
LSM2-211	ENST00000475835	KIAA0825	Q8IV33	1275 aa		4.36	□□□□□ -1.71
LSM2-211	ENST00000475835	MAB21L3	Q8N8X9	362 aa		4.36	□□□□□ -1.71
LSM2-211	ENST00000475835	TEX19	Q8NA77	164 aa		4.36	□□□□□ -1.71
LSM2-211	ENST00000475835	OR8K1	Q8NGG5	319 aa		4.36	□□□□□ -1.71
LSM2-211	ENST00000475835	CTCFL	Q8NI51	663 aa	Predicted RBP	4.36	□□□□□ -1.71
LSM2-211	ENST00000475835	GSDMB	Q8TAX9	411 aa		4.36	□□□□□ -1.71
LSM2-211	ENST00000475835	WDR66	Q8TBY9	1149 aa		4.36	□□□□□ -1.71
LSM2-211	ENST00000475835	CCDC110	Q8TBZ0	833 aa		4.36	□□□□□ -1.71
LSM2-211	ENST00000475835	TRPC4AP	Q8TEL6	797 aa		4.36	□□□□□ -1.71
LSM2-211	ENST00000475835	WHAMM	Q8TF30	809 aa		4.36	□□□□□ -1.71
LSM2-211	ENST00000475835	ANKRD49	Q8WVL7	239 aa		4.36	□□□□□ -1.71
LSM2-211	ENST00000475835	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	4.36	□□□□□ -1.71
LSM2-211	ENST00000475835	RPGR	Q92834	1020 aa	Known RBP	4.36	□□□□□ -1.71
LSM2-211	ENST00000475835	PPP2R3C	Q969Q6	453 aa		4.36	□□□□□ -1.71
LSM2-211	ENST00000475835	SLC35B4	Q969S0	331 aa		4.36	□□□□□ -1.71
LSM2-211	ENST00000475835	C8orf48	Q96LL4	319 aa		4.36	□□□□□ -1.71
LSM2-211	ENST00000475835	UROC1	Q96N76	676 aa		4.36	□□□□□ -1.71
LSM2-211	ENST00000475835	TRERF1	Q96PN7	1200 aa		4.36	□□□□□ -1.71
LSM2-211	ENST00000475835	ALS2CR12	Q96Q35	445 aa		4.36	□□□□□ -1.71
LSM2-211	ENST00000475835	CORO1B	Q9BR76	489 aa		4.36	□□□□□ -1.71
LSM2-211	ENST00000475835	C2orf49	Q9BVC5	232 aa	Predicted RBP	4.36	□□□□□ -1.71
LSM2-211	ENST00000475835	OSBPL10	Q9BXB5	764 aa		4.36	□□□□□ -1.71
LSM2-211	ENST00000475835	TRIM4	Q9C037	500 aa		4.36	□□□□□ -1.71
LSM2-211	ENST00000475835	PGAP2	Q9UHJ9	254 aa		4.36	□□□□□ -1.71
LSM2-211	ENST00000475835	DDX25	Q9UHL0	483 aa	Known RBP	4.36	□□□□□ -1.71
LSM2-211	ENST00000475835	G3BP2	Q9UN86	482 aa	Known RBP	4.36	□□□□□ -1.71
LSM2-211	ENST00000475835	GJA3	Q9Y6H8	435 aa		4.36	□□□□□ -1.71
LSM2-211	ENST00000475835	ANKRD30A	Q9BXX3	1397 aa		4.36	□□□□□ -1.71
LSM2-211	ENST00000475835	TRO	Q12816	1431 aa	Predicted RBP	4.36	□□□□□ -1.71
LSM2-211	ENST00000475835	NUP153	P49790	1475 aa	Known RBP	4.36	□□□□□ -1.71
LSM2-211	ENST00000475835	MRC2	Q9UBG0	1479 aa		4.36	□□□□□ -1.71
LSM2-211	ENST00000475835	EIF4G3	O43432	1585 aa	Known RBP	4.36	□□□□□ -1.71
LSM2-211	ENST00000475835	LINC00854	A0A1B0GVQ3	168 aa		4.35	□□□□□ -1.71
LSM2-211	ENST00000475835	FAM170A	A1A519	330 aa		4.35	□□□□□ -1.71
LSM2-211	ENST00000475835	TARSL2	A2RTX5	802 aa	Known RBP	4.35	□□□□□ -1.71
LSM2-211	ENST00000475835	GRXCR2	A6NFK2	248 aa		4.35	□□□□□ -1.71
LSM2-211	ENST00000475835	TMEM221	A6NGB7	291 aa		4.35	□□□□□ -1.71
LSM2-211	ENST00000475835	C2orf81	A6NN90	581 aa		4.35	□□□□□ -1.71
LSM2-211	ENST00000475835	SMTNL1	A8MU46	457 aa		4.35	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms