RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 CHAF1AQ13111 956 aaPredicted RBP17.79■□□□□ 0.44
ATG9A-220ENST00000475339 WWC1Q8IX03 1113 aa17.79■□□□□ 0.44
ATG9A-220ENST00000475339 ZNF594Q96JF6 807 aaPredicted RBP17.79■□□□□ 0.44
ATG9A-220ENST00000475339 TTYH1Q9H313 450 aaPredicted RBP17.79■□□□□ 0.44
ATG9A-220ENST00000475339 IQSEC3Q9UPP2 1182 aaPredicted RBP17.79■□□□□ 0.44
ATG9A-220ENST00000475339 ZHX2Q9Y6X8 837 aa17.79■□□□□ 0.44
ATG9A-220ENST00000475339 NCBP3Q53F19 620 aaKnown RBP17.78■□□□□ 0.44
ATG9A-220ENST00000475339 GJD2Q9UKL4 321 aa17.78■□□□□ 0.44
ATG9A-220ENST00000475339 SLC45A1Q9Y2W3 748 aa17.78■□□□□ 0.44
ATG9A-220ENST00000475339 TCP10Q12799 353 aa17.77■□□□□ 0.44
ATG9A-220ENST00000475339 LDHAL6AQ6ZMR3 332 aa17.77■□□□□ 0.44
ATG9A-220ENST00000475339 FAM151AQ8WW52 585 aa17.77■□□□□ 0.44
ATG9A-220ENST00000475339 CNNM1Q9NRU3 951 aa17.77■□□□□ 0.44
ATG9A-220ENST00000475339 NCOR1O75376 2440 aa17.77■□□□□ 0.43
ATG9A-220ENST00000475339 FOXO4P98177 505 aa17.76■□□□□ 0.43
ATG9A-220ENST00000475339 MAP3K12Q12852 859 aa17.76■□□□□ 0.43
ATG9A-220ENST00000475339 UBE4AQ14139 1066 aa17.75■□□□□ 0.43
ATG9A-220ENST00000475339 SHHQ15465 462 aa17.75■□□□□ 0.43
ATG9A-220ENST00000475339 FAM110CQ1W6H9 321 aa17.75■□□□□ 0.43
ATG9A-220ENST00000475339 G2E3Q7L622 706 aa17.75■□□□□ 0.43
ATG9A-220ENST00000475339 USP38Q8NB14 1042 aa17.75■□□□□ 0.43
ATG9A-220ENST00000475339 TRIB2Q92519 343 aa17.75■□□□□ 0.43
ATG9A-220ENST00000475339 MRIQ9BWK5 157 aa17.75■□□□□ 0.43
ATG9A-220ENST00000475339 AFG3L2Q9Y4W6 797 aa17.75■□□□□ 0.43
ATG9A-220ENST00000475339 IL16Q14005 1332 aa17.74■□□□□ 0.43
ATG9A-220ENST00000475339 PRKAR2AP13861 404 aaKnown RBP17.74■□□□□ 0.43
ATG9A-220ENST00000475339 PTPRAP18433 802 aa17.74■□□□□ 0.43
ATG9A-220ENST00000475339 TAF7LQ5H9L4 462 aa17.74■□□□□ 0.43
ATG9A-220ENST00000475339 MAP3K21Q5TCX8 1036 aa17.74■□□□□ 0.43
ATG9A-220ENST00000475339 TSPYL6Q8N831 410 aa17.74■□□□□ 0.43
ATG9A-220ENST00000475339 TBC1D22AQ8WUA7 517 aa17.74■□□□□ 0.43
ATG9A-220ENST00000475339 MYH16Q9H6N6 1097 aa17.74■□□□□ 0.43
ATG9A-220ENST00000475339 PICK1Q9NRD5 415 aa17.74■□□□□ 0.43
ATG9A-220ENST00000475339 NFIAQ12857 509 aa17.73■□□□□ 0.43
ATG9A-220ENST00000475339 C9orf50Q5SZB4 431 aa17.73■□□□□ 0.43
ATG9A-220ENST00000475339 VPS37DQ86XT2 251 aa17.73■□□□□ 0.43
ATG9A-220ENST00000475339 SCYL3Q8IZE3 742 aa17.73■□□□□ 0.43
ATG9A-220ENST00000475339 TRIM75PA6NK02 468 aa17.72■□□□□ 0.43
ATG9A-220ENST00000475339 PHF20L1A8MW92 1017 aa17.72■□□□□ 0.43
ATG9A-220ENST00000475339 FRAT2O75474 233 aaPredicted RBP17.72■□□□□ 0.43
ATG9A-220ENST00000475339 CYP2B6P20813 491 aa17.72■□□□□ 0.43
ATG9A-220ENST00000475339 CCDC57Q2TAC2 916 aa17.72■□□□□ 0.43
ATG9A-220ENST00000475339 HHIPL2Q6UWX4 724 aa17.72■□□□□ 0.43
ATG9A-220ENST00000475339 LMBR1LQ6UX01 489 aa17.72■□□□□ 0.43
ATG9A-220ENST00000475339 FBXO33Q7Z6M2 555 aa17.72■□□□□ 0.43
ATG9A-220ENST00000475339 WDR63Q8IWG1 891 aa17.72■□□□□ 0.43
ATG9A-220ENST00000475339 MIER1Q8N108 512 aa17.72■□□□□ 0.43
ATG9A-220ENST00000475339 TSR2Q969E8 191 aaKnown RBP17.72■□□□□ 0.43
ATG9A-220ENST00000475339 CHMP4AQ9BY43 222 aa17.72■□□□□ 0.43
ATG9A-220ENST00000475339 AK9Q5TCS8 1911 aa17.72■□□□□ 0.43
ATG9A-220ENST00000475339 TREML2Q5T2D2 321 aa17.71■□□□□ 0.43
ATG9A-220ENST00000475339 AGTPBP1Q9UPW5 1226 aa17.71■□□□□ 0.43
ATG9A-220ENST00000475339 DNAH12Q6ZR08 3092 aa17.7■□□□□ 0.42
ATG9A-220ENST00000475339 SMAD3P84022 425 aaKnown RBP17.7■□□□□ 0.42
ATG9A-220ENST00000475339 EPHA10Q5JZY3 1008 aa17.7■□□□□ 0.42
ATG9A-220ENST00000475339 LHX8Q68G74 356 aa17.7■□□□□ 0.42
ATG9A-220ENST00000475339 ZFPM1Q8IX07 1006 aa17.7■□□□□ 0.42
ATG9A-220ENST00000475339 LINS1Q8NG48 757 aa17.7■□□□□ 0.42
ATG9A-220ENST00000475339 STK31Q9BXU1 1019 aa17.7■□□□□ 0.42
ATG9A-220ENST00000475339 CDC42EP5Q6NZY7 148 aa17.69■□□□□ 0.42
ATG9A-220ENST00000475339 CCDC84Q86UT8 332 aaPredicted RBP17.69■□□□□ 0.42
ATG9A-220ENST00000475339 PUS3Q9BZE2 481 aaKnown RBP17.69■□□□□ 0.42
ATG9A-220ENST00000475339 SENP6Q9GZR1 1112 aaPredicted RBP17.69■□□□□ 0.42
ATG9A-220ENST00000475339 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.69■□□□□ 0.42
ATG9A-220ENST00000475339 FAM198AQ9UFP1 575 aa17.69■□□□□ 0.42
ATG9A-220ENST00000475339 PRKAG2Q9UGJ0 569 aa17.69■□□□□ 0.42
ATG9A-220ENST00000475339 MAST3O60307 1309 aa17.69■□□□□ 0.42
ATG9A-220ENST00000475339 FANCIQ9NVI1 1328 aa17.69■□□□□ 0.42
ATG9A-220ENST00000475339 CCND3P30281 292 aaPredicted RBP17.68■□□□□ 0.42
ATG9A-220ENST00000475339 ATN1P54259 1190 aaPredicted RBP17.68■□□□□ 0.42
ATG9A-220ENST00000475339 CACNB2Q08289 660 aaPredicted RBP17.68■□□□□ 0.42
ATG9A-220ENST00000475339 DNAAF4Q8WXU2 420 aa17.68■□□□□ 0.42
ATG9A-220ENST00000475339 PNMA3Q9UL41 463 aa17.68■□□□□ 0.42
ATG9A-220ENST00000475339 PTPRFP10586 1907 aa17.67■□□□□ 0.42
ATG9A-220ENST00000475339 SLC4A2P04920 1241 aa17.67■□□□□ 0.42
ATG9A-220ENST00000475339 SLURP2P0DP57 97 aa17.67■□□□□ 0.42
ATG9A-220ENST00000475339 GCLCP48506 637 aaPredicted RBP17.67■□□□□ 0.42
ATG9A-220ENST00000475339 SUGT1Q9Y2Z0 365 aa17.67■□□□□ 0.42
ATG9A-220ENST00000475339 ATRNL1Q5VV63 1379 aa17.66■□□□□ 0.42
ATG9A-220ENST00000475339 BDP1A6H8Y1 2624 aa17.66■□□□□ 0.42
ATG9A-220ENST00000475339 GRIN2CQ14957 1233 aa17.66■□□□□ 0.42
ATG9A-220ENST00000475339 ADAMTS19Q8TE59 1207 aa17.66■□□□□ 0.42
ATG9A-220ENST00000475339 DAGLAQ9Y4D2 1042 aa17.66■□□□□ 0.42
ATG9A-220ENST00000475339 PIEZO1Q92508 2521 aa17.65■□□□□ 0.42
ATG9A-220ENST00000475339 DIXDC1Q155Q3 683 aa17.65■□□□□ 0.42
ATG9A-220ENST00000475339 TWISTNBQ3B726 338 aaPredicted RBP17.65■□□□□ 0.42
ATG9A-220ENST00000475339 CAVIN4Q5BKX8 364 aa17.65■□□□□ 0.42
ATG9A-220ENST00000475339 LRRFIP2Q9Y608 721 aaKnown RBP17.65■□□□□ 0.42
ATG9A-220ENST00000475339 PLXNB2O15031 1838 aa17.65■□□□□ 0.42
ATG9A-220ENST00000475339 XRCC5P13010 732 aaKnown RBP17.64■□□□□ 0.41
ATG9A-220ENST00000475339 ZKSCAN1P17029 563 aaPredicted RBP17.64■□□□□ 0.41
ATG9A-220ENST00000475339 FLIIQ13045 1269 aa17.64■□□□□ 0.41
ATG9A-220ENST00000475339 FKBP5Q13451 457 aaPredicted RBP17.64■□□□□ 0.41
ATG9A-220ENST00000475339 UHRF1Q96T88 793 aaPredicted RBP17.64■□□□□ 0.41
ATG9A-220ENST00000475339 NUDT12Q9BQG2 462 aa17.64■□□□□ 0.41
ATG9A-220ENST00000475339 USP40Q9NVE5 1235 aa17.64■□□□□ 0.41
ATG9A-220ENST00000475339 CTNND1O60716 968 aaKnown RBP17.63■□□□□ 0.41
ATG9A-220ENST00000475339 RTP1P59025 263 aa17.63■□□□□ 0.41
ATG9A-220ENST00000475339 CCL14Q16627 93 aa17.63■□□□□ 0.41
ATG9A-220ENST00000475339 ATXN2LQ8WWM7 1075 aaKnown RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 810.3 ms