RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 CRAMP1Q96RY5 1269 aa5.24□□□□□ -1.57
CCNL1-215ENST00000474539 UPF3BQ9BZI7 483 aaKnown RBP5.24□□□□□ -1.57
CCNL1-215ENST00000474539 CPSF1Q10570 1443 aaKnown RBP5.23□□□□□ -1.57
CCNL1-215ENST00000474539 KRT10P13645 584 aa5.23□□□□□ -1.57
CCNL1-215ENST00000474539 CNGA1P29973 690 aa5.23□□□□□ -1.57
CCNL1-215ENST00000474539 VWA3BQ502W6 1294 aa5.23□□□□□ -1.57
CCNL1-215ENST00000474539 CCDC102BQ68D86 513 aa5.23□□□□□ -1.57
CCNL1-215ENST00000474539 PDILTQ8N807 584 aa5.23□□□□□ -1.57
CCNL1-215ENST00000474539 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.23□□□□□ -1.57
CCNL1-215ENST00000474539 KIFAP3Q92845 792 aa5.23□□□□□ -1.57
CCNL1-215ENST00000474539 FAM193BQ96PV7 902 aaPredicted RBP5.23□□□□□ -1.57
CCNL1-215ENST00000474539 NAA15Q9BXJ9 866 aaKnown RBP5.23□□□□□ -1.57
CCNL1-215ENST00000474539 INO80BQ9C086 356 aaPredicted RBP5.23□□□□□ -1.57
CCNL1-215ENST00000474539 SOS2Q07890 1332 aaPredicted RBP5.23□□□□□ -1.57
CCNL1-215ENST00000474539 CDHR2Q9BYE9 1310 aa5.23□□□□□ -1.57
CCNL1-215ENST00000474539 PSMA7O14818 248 aa5.23□□□□□ -1.57
CCNL1-215ENST00000474539 TRIM27P14373 513 aa5.23□□□□□ -1.57
CCNL1-215ENST00000474539 ERFEQ4G0M1 354 aa5.23□□□□□ -1.57
CCNL1-215ENST00000474539 ASPRV1Q53RT3 343 aa5.23□□□□□ -1.57
CCNL1-215ENST00000474539 USPL1Q5W0Q7 1092 aa5.23□□□□□ -1.57
CCNL1-215ENST00000474539 SLFN12Q8IYM2 578 aa5.23□□□□□ -1.57
CCNL1-215ENST00000474539 TRIML1Q8N9V2 468 aa5.23□□□□□ -1.57
CCNL1-215ENST00000474539 SPATA5Q8NB90 893 aa5.23□□□□□ -1.57
CCNL1-215ENST00000474539 TRIM6Q9C030 488 aaPredicted RBP5.23□□□□□ -1.57
CCNL1-215ENST00000474539 MTFR1LQ9H019 292 aa5.23□□□□□ -1.57
CCNL1-215ENST00000474539 TSPYL2Q9H2G4 693 aaPredicted RBP5.23□□□□□ -1.57
CCNL1-215ENST00000474539 C1orf115Q9H7X2 142 aa5.23□□□□□ -1.57
CCNL1-215ENST00000474539 ARID4AP29374 1257 aaPredicted RBP5.23□□□□□ -1.57
CCNL1-215ENST00000474539 ADCY7P51828 1080 aa5.23□□□□□ -1.57
CCNL1-215ENST00000474539 CHMP4BP1P59074 171 aa5.23□□□□□ -1.57
CCNL1-215ENST00000474539 PDE4DQ08499 809 aa5.23□□□□□ -1.57
CCNL1-215ENST00000474539 HEATR3Q7Z4Q2 680 aa5.23□□□□□ -1.57
CCNL1-215ENST00000474539 CNPY4Q8N129 248 aa5.23□□□□□ -1.57
CCNL1-215ENST00000474539 ALS2CR12Q96Q35 445 aa5.23□□□□□ -1.57
CCNL1-215ENST00000474539 SPINK5Q9NQ38 1064 aaPredicted RBP5.23□□□□□ -1.57
CCNL1-215ENST00000474539 CLIP2Q9UDT6 1046 aa5.23□□□□□ -1.57
CCNL1-215ENST00000474539 HACL1Q9UJ83 578 aa5.23□□□□□ -1.57
CCNL1-215ENST00000474539 PTPRUQ92729 1446 aa5.23□□□□□ -1.57
CCNL1-215ENST00000474539 INO80Q9ULG1 1556 aaPredicted RBP5.23□□□□□ -1.57
CCNL1-215ENST00000474539 NRXN1Q9ULB1 1477 aa5.23□□□□□ -1.57
CCNL1-215ENST00000474539 DDAH1O94760 285 aa5.23□□□□□ -1.57
CCNL1-215ENST00000474539 PPM1FP49593 454 aaPredicted RBP5.23□□□□□ -1.57
CCNL1-215ENST00000474539 TXNRD1Q16881 649 aa5.23□□□□□ -1.57
CCNL1-215ENST00000474539 TNNI3KQ59H18 835 aa5.23□□□□□ -1.57
CCNL1-215ENST00000474539 RILPL1Q5EBL4 403 aa5.23□□□□□ -1.57
CCNL1-215ENST00000474539 WDR44Q5JSH3 913 aa5.23□□□□□ -1.57
CCNL1-215ENST00000474539 NBPF11Q86T75 865 aa5.23□□□□□ -1.57
CCNL1-215ENST00000474539 DPP9Q86TI2 863 aa5.23□□□□□ -1.57
CCNL1-215ENST00000474539 SP8Q8IXZ3 490 aa5.23□□□□□ -1.57
CCNL1-215ENST00000474539 CNNM3Q8NE01 707 aa5.23□□□□□ -1.57
CCNL1-215ENST00000474539 NAP1L5Q96NT1 182 aaPredicted RBP5.23□□□□□ -1.57
CCNL1-215ENST00000474539 MTA3Q9BTC8 594 aa5.23□□□□□ -1.57
CCNL1-215ENST00000474539 KANSL2Q9H9L4 492 aa5.23□□□□□ -1.57
CCNL1-215ENST00000474539 FPGT-TNNI3KV9GXZ4 949 aa5.23□□□□□ -1.57
CCNL1-215ENST00000474539 A0A1B0GUL7 405 aa5.22□□□□□ -1.57
CCNL1-215ENST00000474539 VAMP4O75379 141 aa5.22□□□□□ -1.57
CCNL1-215ENST00000474539 SLU7O95391 586 aaKnown RBP5.22□□□□□ -1.57
CCNL1-215ENST00000474539 STAMBPO95630 424 aa5.22□□□□□ -1.57
CCNL1-215ENST00000474539 ASNSP08243 561 aa5.22□□□□□ -1.57
CCNL1-215ENST00000474539 TOP1P11387 765 aaKnown RBP5.22□□□□□ -1.57
CCNL1-215ENST00000474539 RAB3GAP1Q15042 981 aa5.22□□□□□ -1.57
CCNL1-215ENST00000474539 GIMAP6Q6P9H5 292 aa5.22□□□□□ -1.57
CCNL1-215ENST00000474539 GADL1Q6ZQY3 521 aa5.22□□□□□ -1.57
CCNL1-215ENST00000474539 DHX32Q7L7V1 743 aaKnown RBP5.22□□□□□ -1.57
CCNL1-215ENST00000474539 FAM167AQ96KS9 214 aa5.22□□□□□ -1.57
CCNL1-215ENST00000474539 DSCC1Q9BVC3 393 aa5.22□□□□□ -1.57
CCNL1-215ENST00000474539 SLC26A6Q9BXS9 759 aa5.22□□□□□ -1.57
CCNL1-215ENST00000474539 SYNCQ9H7C4 482 aa5.22□□□□□ -1.57
CCNL1-215ENST00000474539 MAGEF1Q9HAY2 307 aa5.22□□□□□ -1.57
CCNL1-215ENST00000474539 HOXC10Q9NYD6 342 aa5.22□□□□□ -1.57
CCNL1-215ENST00000474539 CNTNAP4Q9C0A0 1308 aa5.22□□□□□ -1.57
CCNL1-215ENST00000474539 KLF18A0A0U1RQI7 1052 aa5.22□□□□□ -1.57
CCNL1-215ENST00000474539 F6X3S4 739 aa5.22□□□□□ -1.57
CCNL1-215ENST00000474539 N4BP1O75113 896 aaKnown RBP5.22□□□□□ -1.57
CCNL1-215ENST00000474539 USP17L8P0C7I0 530 aa5.22□□□□□ -1.57
CCNL1-215ENST00000474539 CAPN2P17655 700 aa5.22□□□□□ -1.57
CCNL1-215ENST00000474539 POLR2BP30876 1174 aaKnown RBP5.22□□□□□ -1.57
CCNL1-215ENST00000474539 YARSP54577 528 aaKnown RBP5.22□□□□□ -1.57
CCNL1-215ENST00000474539 CUL4BQ13620 913 aa5.22□□□□□ -1.57
CCNL1-215ENST00000474539 UBE3CQ15386 1083 aa5.22□□□□□ -1.57
CCNL1-215ENST00000474539 SURF1Q15526 300 aa5.22□□□□□ -1.57
CCNL1-215ENST00000474539 CERKLQ49MI3 558 aaPredicted RBP5.22□□□□□ -1.57
CCNL1-215ENST00000474539 FAM200AQ8TCP9 573 aa5.22□□□□□ -1.57
CCNL1-215ENST00000474539 ZNF496Q96IT1 587 aaPredicted RBP5.22□□□□□ -1.57
CCNL1-215ENST00000474539 NEURL4Q96JN8 1562 aa5.22□□□□□ -1.57
CCNL1-215ENST00000474539 DCTPP1Q9H773 170 aa5.22□□□□□ -1.57
CCNL1-215ENST00000474539 IFT122Q9HBG6 1241 aa5.22□□□□□ -1.57
CCNL1-215ENST00000474539 GPBP1L1Q9HC44 474 aaPredicted RBP5.22□□□□□ -1.57
CCNL1-215ENST00000474539 SEPT11Q9NVA2 429 aaKnown RBP5.22□□□□□ -1.57
CCNL1-215ENST00000474539 RIMS1Q86UR5 1692 aaKnown RBP5.22□□□□□ -1.57
CCNL1-215ENST00000474539 ALKQ9UM73 1620 aa5.22□□□□□ -1.57
CCNL1-215ENST00000474539 GCOM1H8Y6P7 765 aaPredicted RBP5.22□□□□□ -1.57
CCNL1-215ENST00000474539 CALUO43852 315 aaPredicted RBP5.22□□□□□ -1.57
CCNL1-215ENST00000474539 POLR2MP0CAP2 368 aa5.22□□□□□ -1.57
CCNL1-215ENST00000474539 SCP2P22307 547 aa5.22□□□□□ -1.57
CCNL1-215ENST00000474539 GSDMDP57764 484 aa5.22□□□□□ -1.57
CCNL1-215ENST00000474539 NSMCE1Q8WV22 266 aa5.22□□□□□ -1.57
CCNL1-215ENST00000474539 XAGE2Q96GT9 111 aa5.22□□□□□ -1.57
CCNL1-215ENST00000474539 THUMPD2Q9BTF0 503 aaKnown RBP5.22□□□□□ -1.57
CCNL1-215ENST00000474539 UBA5Q9GZZ9 404 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms