RNA–Protein interactions for RNA: ENST00000473879.1

BRAT1-205, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-205ENST00000473879 GOLIM4O00461 696 aa15.98■□□□□ 0.15
BRAT1-205ENST00000473879 USP2O75604 605 aaPredicted RBP15.98■□□□□ 0.15
BRAT1-205ENST00000473879 IREB2P48200 963 aaKnown RBP15.98■□□□□ 0.15
BRAT1-205ENST00000473879 LBX1P52954 281 aa15.98■□□□□ 0.15
BRAT1-205ENST00000473879 CDC42EP5Q6NZY7 148 aa15.98■□□□□ 0.15
BRAT1-205ENST00000473879 KBTBD3Q8NAB2 608 aa15.98■□□□□ 0.15
BRAT1-205ENST00000473879 NSUN4Q96CB9 384 aaKnown RBP15.98■□□□□ 0.15
BRAT1-205ENST00000473879 UPF2Q9HAU5 1272 aaKnown RBP15.98■□□□□ 0.15
BRAT1-205ENST00000473879 FZD1Q9UP38 647 aa15.98■□□□□ 0.15
BRAT1-205ENST00000473879 FOCADQ5VW36 1801 aa15.98■□□□□ 0.15
BRAT1-205ENST00000473879 CDAN1Q8IWY9 1227 aa15.97■□□□□ 0.15
BRAT1-205ENST00000473879 RUFY2Q8WXA3 655 aa15.97■□□□□ 0.15
BRAT1-205ENST00000473879 CSRNP1Q96S65 589 aa15.97■□□□□ 0.15
BRAT1-205ENST00000473879 DIAPH3Q9NSV4 1193 aa15.97■□□□□ 0.15
BRAT1-205ENST00000473879 USP40Q9NVE5 1235 aa15.97■□□□□ 0.15
BRAT1-205ENST00000473879 MYH7P12883 1935 aa15.97■□□□□ 0.15
BRAT1-205ENST00000473879 CDK5RAP2Q96SN8 1893 aa15.97■□□□□ 0.15
BRAT1-205ENST00000473879 CHMLP26374 656 aa15.96■□□□□ 0.15
BRAT1-205ENST00000473879 ZAP70P43403 619 aa15.96■□□□□ 0.15
BRAT1-205ENST00000473879 MECOMQ03112 1051 aa15.96■□□□□ 0.15
BRAT1-205ENST00000473879 TMED8Q6PL24 325 aaPredicted RBP15.96■□□□□ 0.15
BRAT1-205ENST00000473879 ANKRD13AQ8IZ07 590 aa15.96■□□□□ 0.15
BRAT1-205ENST00000473879 FAM151AQ8WW52 585 aa15.96■□□□□ 0.15
BRAT1-205ENST00000473879 HOOK2Q96ED9 719 aa15.96■□□□□ 0.15
BRAT1-205ENST00000473879 SLC10A4Q96EP9 437 aa15.96■□□□□ 0.15
BRAT1-205ENST00000473879 PIH1D3Q9NQM4 214 aaKnown RBP15.96■□□□□ 0.15
BRAT1-205ENST00000473879 SNRKQ9NRH2 765 aa15.96■□□□□ 0.15
BRAT1-205ENST00000473879 SAGE1Q9NXZ1 904 aa15.96■□□□□ 0.15
BRAT1-205ENST00000473879 RPAP1Q9BWH6 1393 aaPredicted RBP15.96■□□□□ 0.15
BRAT1-205ENST00000473879 MROH7-TTC4A0A0A0MT08 1334 aa15.95■□□□□ 0.14
BRAT1-205ENST00000473879 DDX60LQ5H9U9 1706 aaKnown RBP15.95■□□□□ 0.14
BRAT1-205ENST00000473879 LDHCP07864 332 aa15.95■□□□□ 0.14
BRAT1-205ENST00000473879 GSTO1P78417 241 aa15.95■□□□□ 0.14
BRAT1-205ENST00000473879 SPRYD7Q5W111 196 aa15.95■□□□□ 0.14
BRAT1-205ENST00000473879 EDC3Q96F86 508 aaKnown RBP15.95■□□□□ 0.14
BRAT1-205ENST00000473879 IDI2Q9BXS1 227 aa15.95■□□□□ 0.14
BRAT1-205ENST00000473879 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.95■□□□□ 0.146e-7■■■■■ 31.4
BRAT1-205ENST00000473879 NDUFB9Q9Y6M9 179 aa15.95■□□□□ 0.14
BRAT1-205ENST00000473879 RAD50Q92878 1312 aa15.94■□□□□ 0.14
BRAT1-205ENST00000473879 GPR75-ASB3A0A0A6YYF3 556 aa15.94■□□□□ 0.14
BRAT1-205ENST00000473879 ZFYP08048 801 aaPredicted RBP15.94■□□□□ 0.14
BRAT1-205ENST00000473879 BTDP43251 543 aa15.94■□□□□ 0.14
BRAT1-205ENST00000473879 TM4SF4P48230 202 aa15.94■□□□□ 0.14
BRAT1-205ENST00000473879 NFIAQ12857 509 aa15.94■□□□□ 0.14
BRAT1-205ENST00000473879 ZSCAN25Q6NSZ9 544 aa15.94■□□□□ 0.14
BRAT1-205ENST00000473879 CLMNQ96JQ2 1002 aa15.94■□□□□ 0.14
BRAT1-205ENST00000473879 ANTXR1Q9H6X2 564 aa15.94■□□□□ 0.14
BRAT1-205ENST00000473879 RAI14Q9P0K7 980 aa15.94■□□□□ 0.14
BRAT1-205ENST00000473879 LRP2BPQ9P2M1 347 aa15.94■□□□□ 0.14
BRAT1-205ENST00000473879 FAM198AQ9UFP1 575 aa15.94■□□□□ 0.14
BRAT1-205ENST00000473879 COL2A1P02458 1487 aaPredicted RBP15.93■□□□□ 0.14
BRAT1-205ENST00000473879 ENTPD3O75355 529 aa15.93■□□□□ 0.14
BRAT1-205ENST00000473879 REC8O95072 547 aa15.93■□□□□ 0.14
BRAT1-205ENST00000473879 ZBTB48P10074 688 aaPredicted RBP15.93■□□□□ 0.14
BRAT1-205ENST00000473879 MFAP1P55081 439 aaKnown RBP15.93■□□□□ 0.14
BRAT1-205ENST00000473879 RHBDL3P58872 404 aa15.93■□□□□ 0.14
BRAT1-205ENST00000473879 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.93■□□□□ 0.14
BRAT1-205ENST00000473879 WNK4Q96J92 1243 aa15.93■□□□□ 0.14
BRAT1-205ENST00000473879 ESYT1Q9BSJ8 1104 aa15.93■□□□□ 0.14
BRAT1-205ENST00000473879 RNF186Q9NXI6 227 aa15.93■□□□□ 0.14
BRAT1-205ENST00000473879 MAP3K9P80192 1104 aa15.92■□□□□ 0.14
BRAT1-205ENST00000473879 SREBF2Q12772 1141 aa15.92■□□□□ 0.14
BRAT1-205ENST00000473879 TCP10Q12799 353 aa15.92■□□□□ 0.14
BRAT1-205ENST00000473879 MKRN3Q13064 507 aaKnown RBP15.92■□□□□ 0.14
BRAT1-205ENST00000473879 DCAF15Q66K64 600 aa15.92■□□□□ 0.14
BRAT1-205ENST00000473879 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.92■□□□□ 0.14
BRAT1-205ENST00000473879 ADGRA1Q86SQ6 560 aa15.92■□□□□ 0.14
BRAT1-205ENST00000473879 TSKSQ9UJT2 592 aa15.92■□□□□ 0.14
BRAT1-205ENST00000473879 ATRNL1Q5VV63 1379 aa15.91■□□□□ 0.14
BRAT1-205ENST00000473879 MANSC4A6NHS7 340 aaPredicted RBP15.91■□□□□ 0.14
BRAT1-205ENST00000473879 NPM3O75607 178 aaKnown RBP15.91■□□□□ 0.14
BRAT1-205ENST00000473879 WDHD1O75717 1129 aaPredicted RBP15.91■□□□□ 0.14
BRAT1-205ENST00000473879 TRPA1O75762 1119 aa15.91■□□□□ 0.14
BRAT1-205ENST00000473879 INHBEP58166 350 aa15.91■□□□□ 0.14
BRAT1-205ENST00000473879 PPP4CP60510 307 aa15.91■□□□□ 0.14
BRAT1-205ENST00000473879 MAP3K12Q12852 859 aa15.91■□□□□ 0.14
BRAT1-205ENST00000473879 CWC27Q6UX04 472 aaKnown RBP15.91■□□□□ 0.14
BRAT1-205ENST00000473879 TNS4Q8IZW8 715 aa15.91■□□□□ 0.14
BRAT1-205ENST00000473879 TSHZ2Q9NRE2 1034 aa15.91■□□□□ 0.14
BRAT1-205ENST00000473879 SIPA1L1O43166 1804 aa15.91■□□□□ 0.14
BRAT1-205ENST00000473879 TCRBV5S4A2TA0A5A2 114 aa15.9■□□□□ 0.14
BRAT1-205ENST00000473879 RNF113AO15541 343 aaKnown RBP15.9■□□□□ 0.14
BRAT1-205ENST00000473879 SGSM2O43147 1006 aa15.9■□□□□ 0.14
BRAT1-205ENST00000473879 IDH1O75874 414 aaKnown RBP15.9■□□□□ 0.14
BRAT1-205ENST00000473879 NMIQ13287 307 aaPredicted RBP15.9■□□□□ 0.14
BRAT1-205ENST00000473879 VGLL4Q14135 290 aa15.9■□□□□ 0.14
BRAT1-205ENST00000473879 NAA16Q6N069 864 aaPredicted RBP15.9■□□□□ 0.14
BRAT1-205ENST00000473879 ZFPM1Q8IX07 1006 aa15.9■□□□□ 0.14
BRAT1-205ENST00000473879 ZNF341Q9BYN7 854 aa15.9■□□□□ 0.14
BRAT1-205ENST00000473879 ELP3Q9H9T3 547 aa15.9■□□□□ 0.14
BRAT1-205ENST00000473879 CSADQ9Y600 493 aa15.9■□□□□ 0.14
BRAT1-205ENST00000473879 EPB41L2O43491 1005 aaKnown RBP15.89■□□□□ 0.13
BRAT1-205ENST00000473879 SEC24BO95487 1268 aa15.89■□□□□ 0.13
BRAT1-205ENST00000473879 GJA5P36382 358 aa15.89■□□□□ 0.13
BRAT1-205ENST00000473879 WRNIP1Q96S55 665 aa15.89■□□□□ 0.13
BRAT1-205ENST00000473879 DDX4Q9NQI0 724 aaKnown RBP15.89■□□□□ 0.13
BRAT1-205ENST00000473879 HELLSQ9NRZ9 838 aa15.89■□□□□ 0.13
BRAT1-205ENST00000473879 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.89■□□□□ 0.13
BRAT1-205ENST00000473879 ZNF112Q9UJU3 913 aa15.89■□□□□ 0.13
BRAT1-205ENST00000473879 BAG3O95817 575 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms