RNA–Protein interactions for RNA: ENST00000473711.1

SP140-208, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 644 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-208ENST00000473711 RUFY3Q7L099 469 aa12.77□□□□□ -0.37
SP140-208ENST00000473711 SPRYD3Q8NCJ5 442 aa12.77□□□□□ -0.37
SP140-208ENST00000473711 NEK1Q96PY6 1258 aa12.77□□□□□ -0.37
SP140-208ENST00000473711 CRNKL1Q9BZJ0 848 aaKnown RBP12.77□□□□□ -0.37
SP140-208ENST00000473711 TAOK3Q9H2K8 898 aa12.77□□□□□ -0.37
SP140-208ENST00000473711 PDRG1Q9NUG6 133 aa12.77□□□□□ -0.37
SP140-208ENST00000473711 CHD4Q14839 1912 aa12.77□□□□□ -0.37
SP140-208ENST00000473711 MROH7-TTC4A0A0A0MT08 1334 aa12.77□□□□□ -0.37
SP140-208ENST00000473711 GPR75-ASB3A0A0A6YYF3 556 aa12.76□□□□□ -0.37
SP140-208ENST00000473711 NFKBIEO00221 500 aa12.76□□□□□ -0.37
SP140-208ENST00000473711 BTDP43251 543 aa12.76□□□□□ -0.37
SP140-208ENST00000473711 SCNN1DP51172 638 aa12.76□□□□□ -0.37
SP140-208ENST00000473711 PPP4CP60510 307 aa12.76□□□□□ -0.37
SP140-208ENST00000473711 FKBP1AP62942 108 aaKnown RBP12.76□□□□□ -0.37
SP140-208ENST00000473711 COL9A3Q14050 684 aaPredicted RBP12.76□□□□□ -0.37
SP140-208ENST00000473711 NOL8Q76FK4 1167 aaKnown RBP12.76□□□□□ -0.37
SP140-208ENST00000473711 NIM1KQ8IY84 436 aa12.76□□□□□ -0.37
SP140-208ENST00000473711 SH3RF3Q8TEJ3 882 aaPredicted RBP12.76□□□□□ -0.37
SP140-208ENST00000473711 FAM163AQ96GL9 167 aaPredicted RBP12.76□□□□□ -0.37
SP140-208ENST00000473711 RPAP1Q9BWH6 1393 aaPredicted RBP12.76□□□□□ -0.37
SP140-208ENST00000473711 K7ELQ4 463 aaPredicted RBP12.75□□□□□ -0.37
SP140-208ENST00000473711 RAD17O75943 681 aa12.75□□□□□ -0.37
SP140-208ENST00000473711 RPS6KB1P23443 525 aa12.75□□□□□ -0.37
SP140-208ENST00000473711 CTDSPL2Q05D32 466 aa12.75□□□□□ -0.37
SP140-208ENST00000473711 KIAA0825Q8IV33 1275 aa12.75□□□□□ -0.37
SP140-208ENST00000473711 TTC14Q96N46 770 aa12.75□□□□□ -0.37
SP140-208ENST00000473711 ZNRF3Q9ULT6 936 aa12.75□□□□□ -0.37
SP140-208ENST00000473711 DAGLAQ9Y4D2 1042 aa12.75□□□□□ -0.37
SP140-208ENST00000473711 CEP350Q5VT06 3117 aa12.75□□□□□ -0.37
SP140-208ENST00000473711 GAKO14976 1311 aa12.74□□□□□ -0.37
SP140-208ENST00000473711 ZMYM6O95789 1325 aa12.74□□□□□ -0.37
SP140-208ENST00000473711 MINDY4BA8MYZ0 360 aa12.74□□□□□ -0.37
SP140-208ENST00000473711 PSMD14O00487 310 aa12.74□□□□□ -0.37
SP140-208ENST00000473711 USP5P45974 858 aa12.74□□□□□ -0.37
SP140-208ENST00000473711 MCM2P49736 904 aa12.74□□□□□ -0.37
SP140-208ENST00000473711 AK2P54819 239 aa12.74□□□□□ -0.37
SP140-208ENST00000473711 RASSF7Q02833 373 aa12.74□□□□□ -0.37
SP140-208ENST00000473711 STK11IPQ8N1F8 1099 aa12.74□□□□□ -0.37
SP140-208ENST00000473711 JDP2Q8WYK2 163 aa12.74□□□□□ -0.37
SP140-208ENST00000473711 TCEANC2Q96MN5 208 aa12.74□□□□□ -0.37
SP140-208ENST00000473711 LARP6Q9BRS8 491 aaKnown RBP12.74□□□□□ -0.37
SP140-208ENST00000473711 SYT17Q9BSW7 474 aa12.74□□□□□ -0.37
SP140-208ENST00000473711 NBPF3Q9H094 633 aa12.74□□□□□ -0.37
SP140-208ENST00000473711 INCENPQ9NQS7 918 aa12.74□□□□□ -0.37
SP140-208ENST00000473711 ATP8A2Q9NTI2 1148 aa12.74□□□□□ -0.37
SP140-208ENST00000473711 CCDC88AQ3V6T2 1871 aa12.74□□□□□ -0.37
SP140-208ENST00000473711 CYP2D7A0A087X1C5 515 aa12.73□□□□□ -0.37
SP140-208ENST00000473711 VIL1P09327 827 aaKnown RBP12.73□□□□□ -0.37
SP140-208ENST00000473711 CRKP46108 304 aa12.73□□□□□ -0.37
SP140-208ENST00000473711 PPARAQ07869 468 aa12.73□□□□□ -0.37
SP140-208ENST00000473711 GIMAP6Q6P9H5 292 aa12.73□□□□□ -0.37
SP140-208ENST00000473711 RSBN1LQ6PCB5 846 aaPredicted RBP12.73□□□□□ -0.37
SP140-208ENST00000473711 CTR9Q6PD62 1173 aa12.73□□□□□ -0.37
SP140-208ENST00000473711 HHIPL2Q6UWX4 724 aa12.73□□□□□ -0.37
SP140-208ENST00000473711 ARHGAP27Q6ZUM4 889 aa12.73□□□□□ -0.37
SP140-208ENST00000473711 DHX32Q7L7V1 743 aaKnown RBP12.73□□□□□ -0.37
SP140-208ENST00000473711 TBC1D10CQ8IV04 446 aa12.73□□□□□ -0.37
SP140-208ENST00000473711 TEX11Q8IYF3 940 aa12.73□□□□□ -0.37
SP140-208ENST00000473711 PDCD7Q8N8D1 485 aaKnown RBP12.73□□□□□ -0.37
SP140-208ENST00000473711 IL27Q8NEV9 243 aa12.73□□□□□ -0.37
SP140-208ENST00000473711 TGFBRAP1Q8WUH2 860 aa12.73□□□□□ -0.37
SP140-208ENST00000473711 TEKT1Q969V4 418 aa12.73□□□□□ -0.37
SP140-208ENST00000473711 DCP1AQ9NPI6 582 aaPredicted RBP12.73□□□□□ -0.37
SP140-208ENST00000473711 MAST2Q6P0Q8 1798 aa12.72□□□□□ -0.37
SP140-208ENST00000473711 USP17L12C9JPN9 530 aa12.72□□□□□ -0.37
SP140-208ENST00000473711 USP17L21D6R901 530 aa12.72□□□□□ -0.37
SP140-208ENST00000473711 SMIM22K7EJ46 135 aa12.72□□□□□ -0.37
SP140-208ENST00000473711 HMGB1P09429 215 aaKnown RBP12.72□□□□□ -0.37
SP140-208ENST00000473711 RBM5P52756 815 aaKnown RBP eCLIP12.72□□□□□ -0.37
SP140-208ENST00000473711 RHBDL3P58872 404 aa12.72□□□□□ -0.37
SP140-208ENST00000473711 CXCL9Q07325 125 aa12.72□□□□□ -0.37
SP140-208ENST00000473711 CHST3Q7LGC8 479 aa12.72□□□□□ -0.37
SP140-208ENST00000473711 RALYLQ86SE5 291 aaKnown RBP12.72□□□□□ -0.37
SP140-208ENST00000473711 CERS3Q8IU89 383 aa12.72□□□□□ -0.37
SP140-208ENST00000473711 MAPKAPK5Q8IW41 473 aa12.72□□□□□ -0.37
SP140-208ENST00000473711 NCOA7Q8NI08 942 aa12.72□□□□□ -0.37
SP140-208ENST00000473711 MRIQ9BWK5 157 aa12.72□□□□□ -0.37
SP140-208ENST00000473711 LRRC2Q9BYS8 371 aa12.72□□□□□ -0.37
SP140-208ENST00000473711 USP40Q9NVE5 1235 aa12.72□□□□□ -0.37
SP140-208ENST00000473711 MCM9Q9NXL9 1143 aa12.72□□□□□ -0.37
SP140-208ENST00000473711 TACC3Q9Y6A5 838 aa12.72□□□□□ -0.37
SP140-208ENST00000473711 COL4A5P29400 1685 aa12.72□□□□□ -0.37
SP140-208ENST00000473711 BRCA1P38398 1863 aaKnown RBP12.72□□□□□ -0.37
SP140-208ENST00000473711 LTBP3Q9NS15 1303 aa12.71□□□□□ -0.37
SP140-208ENST00000473711 HSP90AA1P07900 732 aaKnown RBP12.71□□□□□ -0.37
SP140-208ENST00000473711 USP17L8P0C7I0 530 aa12.71□□□□□ -0.37
SP140-208ENST00000473711 CYP2D6P10635 497 aa12.71□□□□□ -0.37
SP140-208ENST00000473711 PRELPP51888 382 aa12.71□□□□□ -0.37
SP140-208ENST00000473711 HDLBPQ00341 1268 aaKnown RBP12.71□□□□□ -0.37
SP140-208ENST00000473711 EXOSC10Q01780 885 aaKnown RBP12.71□□□□□ -0.37
SP140-208ENST00000473711 TRDNQ13061 729 aa12.71□□□□□ -0.37
SP140-208ENST00000473711 AKNAD1Q5T1N1 836 aa12.71□□□□□ -0.37
SP140-208ENST00000473711 CIAPIN1Q6FI81 312 aa12.71□□□□□ -0.37
SP140-208ENST00000473711 APOBEC3HQ6NTF7 200 aaKnown RBP12.71□□□□□ -0.37
SP140-208ENST00000473711 MFSD6Q6ZSS7 791 aa12.71□□□□□ -0.37
SP140-208ENST00000473711 Q6ZUG5 572 aa12.71□□□□□ -0.37
SP140-208ENST00000473711 SLAIN1Q8ND83 568 aa12.71□□□□□ -0.37
SP140-208ENST00000473711 TMX3Q96JJ7 454 aa12.71□□□□□ -0.37
SP140-208ENST00000473711 ALDH8A1Q9H2A2 487 aaPredicted RBP12.71□□□□□ -0.37
SP140-208ENST00000473711 LIMCH1Q9UPQ0 1083 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms