RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 ANGEL1Q9UNK9 670 aaKnown RBP23.93■■□□□ 1.42
HDAC7-220ENST00000471235 UBE2Q2LH0YL09 131 aa23.92■■□□□ 1.42
HDAC7-220ENST00000471235 NEFLP07196 543 aa23.92■■□□□ 1.42
HDAC7-220ENST00000471235 VEGFBP49765 207 aa23.92■■□□□ 1.42
HDAC7-220ENST00000471235 SLFNL1Q499Z3 407 aa23.92■■□□□ 1.42
HDAC7-220ENST00000471235 CYP4F22Q6NT55 531 aa23.92■■□□□ 1.42
HDAC7-220ENST00000471235 PAXIP1Q6ZW49 1069 aaPredicted RBP23.92■■□□□ 1.42
HDAC7-220ENST00000471235 KBTBD3Q8NAB2 608 aa23.92■■□□□ 1.42
HDAC7-220ENST00000471235 ATRNL1Q5VV63 1379 aa23.91■■□□□ 1.42
HDAC7-220ENST00000471235 NPM3O75607 178 aaKnown RBP23.91■■□□□ 1.42
HDAC7-220ENST00000471235 CHGBP05060 677 aa23.91■■□□□ 1.42
HDAC7-220ENST00000471235 MAP3K11Q16584 847 aa23.91■■□□□ 1.42
HDAC7-220ENST00000471235 CAPNS2Q96L46 248 aa23.91■■□□□ 1.42
HDAC7-220ENST00000471235 PPP1R12BO60237 982 aaPredicted RBP23.9■■□□□ 1.42
HDAC7-220ENST00000471235 RGMBQ6NW40 437 aa23.9■■□□□ 1.42
HDAC7-220ENST00000471235 SH3BP5LQ7L8J4 393 aa23.9■■□□□ 1.42
HDAC7-220ENST00000471235 PLEKHM2Q8IWE5 1019 aa23.9■■□□□ 1.42
HDAC7-220ENST00000471235 RIOK1Q9BRS2 568 aaKnown RBP23.9■■□□□ 1.42
HDAC7-220ENST00000471235 FLT1P17948 1338 aa23.89■■□□□ 1.42
HDAC7-220ENST00000471235 WDR33Q9C0J8 1336 aaKnown RBP23.89■■□□□ 1.42
HDAC7-220ENST00000471235 MAGEB6P1A0A0J9YX57 407 aa23.89■■□□□ 1.41
HDAC7-220ENST00000471235 USP2O75604 605 aaPredicted RBP23.89■■□□□ 1.41
HDAC7-220ENST00000471235 UBE3CQ15386 1083 aa23.89■■□□□ 1.41
HDAC7-220ENST00000471235 ZSCAN25Q6NSZ9 544 aa23.89■■□□□ 1.41
HDAC7-220ENST00000471235 CERS3Q8IU89 383 aa23.89■■□□□ 1.41
HDAC7-220ENST00000471235 OSBPL5Q9H0X9 879 aaPredicted RBP23.89■■□□□ 1.41
HDAC7-220ENST00000471235 DDTLA6NHG4 134 aaPredicted RBP23.88■■□□□ 1.41
HDAC7-220ENST00000471235 PDE4AP27815 886 aa23.88■■□□□ 1.41
HDAC7-220ENST00000471235 ECE1P42892 770 aa23.88■■□□□ 1.41
HDAC7-220ENST00000471235 GRM1Q13255 1194 aa23.88■■□□□ 1.41
HDAC7-220ENST00000471235 LDLRAD1Q5T700 205 aa23.88■■□□□ 1.41
HDAC7-220ENST00000471235 TGFBRAP1Q8WUH2 860 aa23.88■■□□□ 1.41
HDAC7-220ENST00000471235 HOOK2Q96ED9 719 aa23.88■■□□□ 1.41
HDAC7-220ENST00000471235 PHIPQ8WWQ0 1821 aa23.88■■□□□ 1.41
HDAC7-220ENST00000471235 IREB2P48200 963 aaKnown RBP23.87■■□□□ 1.41
HDAC7-220ENST00000471235 ZNF157P51786 506 aaPredicted RBP23.87■■□□□ 1.41
HDAC7-220ENST00000471235 RASAL3Q86YV0 1011 aa23.87■■□□□ 1.41
HDAC7-220ENST00000471235 MAPKAPK5Q8IW41 473 aa23.87■■□□□ 1.41
HDAC7-220ENST00000471235 ZSCAN29Q8IWY8 852 aaPredicted RBP23.87■■□□□ 1.41
HDAC7-220ENST00000471235 LCORLQ8N3X6 602 aa23.87■■□□□ 1.41
HDAC7-220ENST00000471235 CSRNP1Q96S65 589 aa23.87■■□□□ 1.41
HDAC7-220ENST00000471235 OSBPL3Q9H4L5 887 aa23.87■■□□□ 1.41
HDAC7-220ENST00000471235 FAM155AB1AL88 458 aaPredicted RBP23.86■■□□□ 1.41
HDAC7-220ENST00000471235 SLC10A3P09131 477 aa23.86■■□□□ 1.41
HDAC7-220ENST00000471235 DCAF15Q66K64 600 aa23.86■■□□□ 1.41
HDAC7-220ENST00000471235 JMYQ8N9B5 988 aa23.86■■□□□ 1.41
HDAC7-220ENST00000471235 FSD1Q9BTV5 496 aa23.86■■□□□ 1.41
HDAC7-220ENST00000471235 PTPRFP10586 1907 aa23.85■■□□□ 1.41
HDAC7-220ENST00000471235 MBD4O95243 580 aa23.85■■□□□ 1.41
HDAC7-220ENST00000471235 MIGA2Q7L4E1 593 aa23.85■■□□□ 1.41
HDAC7-220ENST00000471235 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.85■■□□□ 1.41
HDAC7-220ENST00000471235 CLMNQ96JQ2 1002 aa23.85■■□□□ 1.41
HDAC7-220ENST00000471235 ZNF341Q9BYN7 854 aa23.85■■□□□ 1.41
HDAC7-220ENST00000471235 RNF113AO15541 343 aaKnown RBP23.84■■□□□ 1.41
HDAC7-220ENST00000471235 AOC2O75106 756 aa23.84■■□□□ 1.41
HDAC7-220ENST00000471235 ARMT1Q9H993 441 aa23.84■■□□□ 1.41
HDAC7-220ENST00000471235 ZFYP08048 801 aaPredicted RBP23.83■■□□□ 1.41
HDAC7-220ENST00000471235 USP5P45974 858 aa23.83■■□□□ 1.41
HDAC7-220ENST00000471235 CENPQQ7L2Z9 268 aaPredicted RBP23.83■■□□□ 1.41
HDAC7-220ENST00000471235 ANKRD13AQ8IZ07 590 aa23.83■■□□□ 1.41
HDAC7-220ENST00000471235 APPBP2Q92624 585 aa23.83■■□□□ 1.41
HDAC7-220ENST00000471235 CCDC102AQ96A19 550 aa23.83■■□□□ 1.41
HDAC7-220ENST00000471235 EVI5LQ96CN4 794 aa23.83■■□□□ 1.41
HDAC7-220ENST00000471235 WRNIP1Q96S55 665 aa23.83■■□□□ 1.41
HDAC7-220ENST00000471235 CRNKL1Q9BZJ0 848 aaKnown RBP23.83■■□□□ 1.41
HDAC7-220ENST00000471235 PUS7LQ9H0K6 701 aaKnown RBP23.83■■□□□ 1.41
HDAC7-220ENST00000471235 UNCXA6NJT0 531 aa23.82■■□□□ 1.4
HDAC7-220ENST00000471235 SLURP2P0DP57 97 aa23.82■■□□□ 1.4
HDAC7-220ENST00000471235 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.82■■□□□ 1.4
HDAC7-220ENST00000471235 SAP30BPQ9UHR5 308 aaKnown RBP23.82■■□□□ 1.4
HDAC7-220ENST00000471235 NOGQ13253 232 aa23.81■■□□□ 1.4
HDAC7-220ENST00000471235 VGLL4Q14135 290 aa23.81■■□□□ 1.4
HDAC7-220ENST00000471235 LRRFIP1Q32MZ4 808 aaKnown RBP23.81■■□□□ 1.4
HDAC7-220ENST00000471235 MAP3K9P80192 1104 aa23.8■■□□□ 1.4
HDAC7-220ENST00000471235 MAP3K10Q02779 954 aa23.8■■□□□ 1.4
HDAC7-220ENST00000471235 SDR42E1Q8WUS8 393 aa23.8■■□□□ 1.4
HDAC7-220ENST00000471235 OSBP2Q969R2 916 aa23.8■■□□□ 1.4
HDAC7-220ENST00000471235 AIDAQ96BJ3 306 aa23.8■■□□□ 1.4
HDAC7-220ENST00000471235 ZIC5Q96T25 663 aa23.8■■□□□ 1.4
HDAC7-220ENST00000471235 DHX36Q9H2U1 1008 aaKnown RBP23.8■■□□□ 1.4
HDAC7-220ENST00000471235 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.8■■□□□ 1.4
HDAC7-220ENST00000471235 ZNF112Q9UJU3 913 aa23.8■■□□□ 1.4
HDAC7-220ENST00000471235 PALD1Q9ULE6 856 aa23.8■■□□□ 1.4
HDAC7-220ENST00000471235 SNCAIPQ9Y6H5 919 aa23.8■■□□□ 1.4
HDAC7-220ENST00000471235 FAM196BA6NMK8 535 aa23.79■■□□□ 1.4
HDAC7-220ENST00000471235 M0R2C6 588 aa23.79■■□□□ 1.4
HDAC7-220ENST00000471235 INPP5BP32019 993 aa23.79■■□□□ 1.4
HDAC7-220ENST00000471235 ELP3Q9H9T3 547 aa23.79■■□□□ 1.4
HDAC7-220ENST00000471235 CSADQ9Y600 493 aa23.79■■□□□ 1.4
HDAC7-220ENST00000471235 TRIM6-TRIM34B2RNG4 842 aa23.78■■□□□ 1.4
HDAC7-220ENST00000471235 PRKAB2O43741 272 aa23.78■■□□□ 1.4
HDAC7-220ENST00000471235 MAP2K2P36507 400 aa23.78■■□□□ 1.4
HDAC7-220ENST00000471235 SLC4A8Q2Y0W8 1093 aa23.78■■□□□ 1.4
HDAC7-220ENST00000471235 ZMYM1Q5SVZ6 1142 aa23.78■■□□□ 1.4
HDAC7-220ENST00000471235 ZKSCAN4Q969J2 545 aaPredicted RBP23.78■■□□□ 1.4
HDAC7-220ENST00000471235 SLC10A4Q96EP9 437 aa23.78■■□□□ 1.4
HDAC7-220ENST00000471235 WNK4Q96J92 1243 aa23.78■■□□□ 1.4
HDAC7-220ENST00000471235 CCDC136Q96JN2 1154 aa23.78■■□□□ 1.4
HDAC7-220ENST00000471235 PHF20L1A8MW92 1017 aa23.77■■□□□ 1.4
HDAC7-220ENST00000471235 TBC1D12O60347 775 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms