RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 C2orf69Q8N8R5 385 aa15.15■□□□□ 0.02
SPTLC1-204ENST00000469778 TGFBRAP1Q8WUH2 860 aa15.15■□□□□ 0.02
SPTLC1-204ENST00000469778 TEPSINQ96N21 525 aa15.15■□□□□ 0.02
SPTLC1-204ENST00000469778 OSBPL5Q9H0X9 879 aaPredicted RBP15.15■□□□□ 0.02
SPTLC1-204ENST00000469778 PI4KBQ9UBF8 816 aa15.15■□□□□ 0.02
SPTLC1-204ENST00000469778 TMEM88BA6NKF7 163 aa15.14■□□□□ 0.01
SPTLC1-204ENST00000469778 PATL2C9JE40 543 aaKnown RBP15.14■□□□□ 0.01
SPTLC1-204ENST00000469778 GPAA1O43292 621 aa15.14■□□□□ 0.01
SPTLC1-204ENST00000469778 CACNB3P54284 484 aa15.14■□□□□ 0.01
SPTLC1-204ENST00000469778 MAP3K10Q02779 954 aa15.14■□□□□ 0.01
SPTLC1-204ENST00000469778 TCP10Q12799 353 aa15.14■□□□□ 0.01
SPTLC1-204ENST00000469778 ARMC9Q7Z3E5 817 aa15.14■□□□□ 0.01
SPTLC1-204ENST00000469778 ZSCAN29Q8IWY8 852 aaPredicted RBP15.14■□□□□ 0.01
SPTLC1-204ENST00000469778 LCORLQ8N3X6 602 aa15.14■□□□□ 0.01
SPTLC1-204ENST00000469778 TMEM39BQ9GZU3 492 aa15.14■□□□□ 0.01
SPTLC1-204ENST00000469778 ARMT1Q9H993 441 aa15.14■□□□□ 0.01
SPTLC1-204ENST00000469778 MKRN1Q9UHC7 482 aaKnown RBP15.14■□□□□ 0.01
SPTLC1-204ENST00000469778 HERC5Q9UII4 1024 aaKnown RBP15.14■□□□□ 0.01
SPTLC1-204ENST00000469778 SLC4A4Q9Y6R1 1079 aa15.14■□□□□ 0.01
SPTLC1-204ENST00000469778 FLT1P17948 1338 aa15.14■□□□□ 0.01
SPTLC1-204ENST00000469778 RAD50Q92878 1312 aa15.14■□□□□ 0.01
SPTLC1-204ENST00000469778 TRAF5O00463 557 aa15.13■□□□□ 0.01
SPTLC1-204ENST00000469778 EIF5BO60841 1220 aaKnown RBP15.13■□□□□ 0.01
SPTLC1-204ENST00000469778 CELF2O95319 508 aaKnown RBP15.13■□□□□ 0.01
SPTLC1-204ENST00000469778 HLA-DOAP06340 250 aa15.13■□□□□ 0.01
SPTLC1-204ENST00000469778 CHMLP26374 656 aa15.13■□□□□ 0.01
SPTLC1-204ENST00000469778 PICALMQ13492 652 aa15.13■□□□□ 0.01
SPTLC1-204ENST00000469778 MAP3K11Q16584 847 aa15.13■□□□□ 0.01
SPTLC1-204ENST00000469778 HHIPL1Q96JK4 782 aa15.13■□□□□ 0.01
SPTLC1-204ENST00000469778 CSRNP1Q96S65 589 aa15.13■□□□□ 0.01
SPTLC1-204ENST00000469778 CREBZFQ9NS37 354 aa15.13■□□□□ 0.01
SPTLC1-204ENST00000469778 MYO5AQ9Y4I1 1855 aaKnown RBP15.12■□□□□ 0.01
SPTLC1-204ENST00000469778 ALX1Q15699 326 aa15.12■□□□□ 0.01
SPTLC1-204ENST00000469778 NBPF12Q5TAG4 269 aaPredicted RBP15.12■□□□□ 0.01
SPTLC1-204ENST00000469778 CST9Q5W186 159 aa15.12■□□□□ 0.01
SPTLC1-204ENST00000469778 METTL16Q86W50 562 aaKnown RBP15.12■□□□□ 0.01
SPTLC1-204ENST00000469778 MAPKAPK5Q8IW41 473 aa15.12■□□□□ 0.01
SPTLC1-204ENST00000469778 EHD4Q9H223 541 aa15.12■□□□□ 0.01
SPTLC1-204ENST00000469778 GBA2Q9HCG7 927 aaPredicted RBP15.12■□□□□ 0.01
SPTLC1-204ENST00000469778 DCP1AQ9NPI6 582 aaPredicted RBP15.12■□□□□ 0.01
SPTLC1-204ENST00000469778 DDX4Q9NQI0 724 aaKnown RBP15.12■□□□□ 0.01
SPTLC1-204ENST00000469778 GTF3C3Q9Y5Q9 886 aa15.12■□□□□ 0.01
SPTLC1-204ENST00000469778 POLR2AP24928 1970 aaKnown RBP15.12■□□□□ 0.01
SPTLC1-204ENST00000469778 MYH7P12883 1935 aa15.11■□□□□ 0.01
SPTLC1-204ENST00000469778 M0R2C6 588 aa15.11■□□□□ 0.01
SPTLC1-204ENST00000469778 IREB2P48200 963 aaKnown RBP15.11■□□□□ 0.01
SPTLC1-204ENST00000469778 NMIQ13287 307 aaPredicted RBP15.11■□□□□ 0.01
SPTLC1-204ENST00000469778 SBK1Q52WX2 424 aa15.11■□□□□ 0.01
SPTLC1-204ENST00000469778 CWC27Q6UX04 472 aaKnown RBP15.11■□□□□ 0.01
SPTLC1-204ENST00000469778 FAM227BQ96M60 508 aa15.11■□□□□ 0.01
SPTLC1-204ENST00000469778 ZNF341Q9BYN7 854 aa15.11■□□□□ 0.01
SPTLC1-204ENST00000469778 MCM9Q9NXL9 1143 aa15.11■□□□□ 0.01
SPTLC1-204ENST00000469778 ARPP21Q9UBL0 812 aaPredicted RBP15.11■□□□□ 0.01
SPTLC1-204ENST00000469778 CCDC171Q6TFL3 1326 aa15.11■□□□□ 0.01
SPTLC1-204ENST00000469778 GSG1L2A8MUP6 293 aa15.1■□□□□ 0.01
SPTLC1-204ENST00000469778 CDC45O75419 566 aa15.1■□□□□ 0.01
SPTLC1-204ENST00000469778 APPP05067 770 aa15.1■□□□□ 0.01
SPTLC1-204ENST00000469778 POLR3DP05423 398 aaPredicted RBP15.1■□□□□ 0.01
SPTLC1-204ENST00000469778 HSPA6P17066 643 aa15.1■□□□□ 0.01
SPTLC1-204ENST00000469778 SLFNL1Q499Z3 407 aa15.1■□□□□ 0.01
SPTLC1-204ENST00000469778 ZFPM1Q8IX07 1006 aa15.1■□□□□ 0.01
SPTLC1-204ENST00000469778 ZNF287Q9HBT7 754 aa15.1■□□□□ 0.01
SPTLC1-204ENST00000469778 GINM1Q9NU53 330 aa15.1■□□□□ 0.01
SPTLC1-204ENST00000469778 SERPINB13Q9UIV8 391 aa15.1■□□□□ 0.01
SPTLC1-204ENST00000469778 A0A0D9SFI3 127 aa15.09■□□□□ 0.01
SPTLC1-204ENST00000469778 DDTLA6NHG4 134 aaPredicted RBP15.09■□□□□ 0.01
SPTLC1-204ENST00000469778 CHGBP05060 677 aa15.09■□□□□ 0.01
SPTLC1-204ENST00000469778 SLC3A2P08195 630 aaKnown RBP15.09■□□□□ 0.01
SPTLC1-204ENST00000469778 NT5C2P49902 561 aa15.09■□□□□ 0.01
SPTLC1-204ENST00000469778 TTLL12Q14166 644 aaPredicted RBP15.09■□□□□ 0.01
SPTLC1-204ENST00000469778 LDLRAD1Q5T700 205 aa15.09■□□□□ 0.01
SPTLC1-204ENST00000469778 PRAMEF18Q5VWM3 479 aa15.09■□□□□ 0.01
SPTLC1-204ENST00000469778 SH3BP5LQ7L8J4 393 aa15.09■□□□□ 0.01
SPTLC1-204ENST00000469778 IFNL3Q8IZI9 196 aa15.09■□□□□ 0.01
SPTLC1-204ENST00000469778 SDR42E1Q8WUS8 393 aa15.09■□□□□ 0.01
SPTLC1-204ENST00000469778 SEC62Q99442 399 aaKnown RBP15.09■□□□□ 0.01
SPTLC1-204ENST00000469778 TRIM34Q9BYJ4 488 aa15.09■□□□□ 0.01
SPTLC1-204ENST00000469778 ZNF408Q9H9D4 720 aa15.09■□□□□ 0.01
SPTLC1-204ENST00000469778 SWAP70Q9UH65 585 aa15.09■□□□□ 0.01
SPTLC1-204ENST00000469778 CTNNA3Q9UI47 895 aa15.09■□□□□ 0.01
SPTLC1-204ENST00000469778 ZNF112Q9UJU3 913 aa15.09■□□□□ 0.01
SPTLC1-204ENST00000469778 PALD1Q9ULE6 856 aa15.09■□□□□ 0.01
SPTLC1-204ENST00000469778 SCAF8Q9UPN6 1271 aaKnown RBP15.09■□□□□ 0.01
SPTLC1-204ENST00000469778 TLL2Q9Y6L7 1015 aa15.09■□□□□ 0.01
SPTLC1-204ENST00000469778 ZMYM6O95789 1325 aa15.09■□□□□ 0.01
SPTLC1-204ENST00000469778 PRKAB2O43741 272 aa15.08■□□□□ 0
SPTLC1-204ENST00000469778 USP2O75604 605 aaPredicted RBP15.08■□□□□ 0
SPTLC1-204ENST00000469778 MAP3K9P80192 1104 aa15.08■□□□□ 0
SPTLC1-204ENST00000469778 C12orf60Q5U649 245 aa15.08■□□□□ 0
SPTLC1-204ENST00000469778 KIAA1211Q6ZU35 1233 aa15.08■□□□□ 0
SPTLC1-204ENST00000469778 SAPCD2Q86UD0 394 aa15.08■□□□□ 0
SPTLC1-204ENST00000469778 ANKRD13AQ8IZ07 590 aa15.08■□□□□ 0
SPTLC1-204ENST00000469778 CRACR2BQ8N4Y2 399 aaPredicted RBP15.08■□□□□ 0
SPTLC1-204ENST00000469778 CCDC102AQ96A19 550 aa15.08■□□□□ 0
SPTLC1-204ENST00000469778 KLRG1Q96E93 195 aa15.08■□□□□ 0
SPTLC1-204ENST00000469778 DSCC1Q9BVC3 393 aa15.08■□□□□ 0
SPTLC1-204ENST00000469778 NAPBQ9H115 298 aa15.08■□□□□ 0
SPTLC1-204ENST00000469778 USP17L12C9JPN9 530 aa15.07■□□□□ 0
SPTLC1-204ENST00000469778 USP17L21D6R901 530 aa15.07■□□□□ 0
SPTLC1-204ENST00000469778 SGSM2O43147 1006 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms