RNA–Protein interactions for RNA: ENST00000469356.3

SREBF1-208, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-208ENST00000469356 NACAP1Q9BZK3 213 aa27.51■■□□□ 1.99
SREBF1-208ENST00000469356 A0A0D9SFI3 127 aa27.5■■□□□ 1.99
SREBF1-208ENST00000469356 TCP10Q12799 353 aa27.5■■□□□ 1.99
SREBF1-208ENST00000469356 NFIAQ12857 509 aa27.5■■□□□ 1.99
SREBF1-208ENST00000469356 GIMAP6Q6P9H5 292 aa27.5■■□□□ 1.99
SREBF1-208ENST00000469356 ZSCAN29Q8IWY8 852 aaPredicted RBP27.5■■□□□ 1.99
SREBF1-208ENST00000469356 SEC62Q99442 399 aaKnown RBP27.5■■□□□ 1.99
SREBF1-208ENST00000469356 DHX36Q9H2U1 1008 aaKnown RBP27.5■■□□□ 1.99
SREBF1-208ENST00000469356 FAM198AQ9UFP1 575 aa27.5■■□□□ 1.99
SREBF1-208ENST00000469356 MAPKAPK5Q8IW41 473 aa27.49■■□□□ 1.99
SREBF1-208ENST00000469356 OSBPL5Q9H0X9 879 aaPredicted RBP27.49■■□□□ 1.99
SREBF1-208ENST00000469356 FOCADQ5VW36 1801 aa27.49■■□□□ 1.99
SREBF1-208ENST00000469356 PATL2C9JE40 543 aaKnown RBP27.48■■□□□ 1.99
SREBF1-208ENST00000469356 ADM5C9JUS6 153 aa27.48■■□□□ 1.99
SREBF1-208ENST00000469356 APPP05067 770 aa27.48■■□□□ 1.99
SREBF1-208ENST00000469356 FLT1P17948 1338 aa27.48■■□□□ 1.99
SREBF1-208ENST00000469356 CCDC171Q6TFL3 1326 aa27.48■■□□□ 1.99
SREBF1-208ENST00000469356 CDK5RAP2Q96SN8 1893 aa27.48■■□□□ 1.99
SREBF1-208ENST00000469356 HLA-DOAP06340 250 aa27.47■■□□□ 1.99
SREBF1-208ENST00000469356 DDX4Q9NQI0 724 aaKnown RBP27.47■■□□□ 1.99
SREBF1-208ENST00000469356 COL2A1P02458 1487 aaPredicted RBP27.47■■□□□ 1.99
SREBF1-208ENST00000469356 CNTNAP1P78357 1384 aa27.46■■□□□ 1.99
SREBF1-208ENST00000469356 TTC6Q86TZ1 520 aa27.46■■□□□ 1.99
SREBF1-208ENST00000469356 SDR42E1Q8WUS8 393 aa27.46■■□□□ 1.99
SREBF1-208ENST00000469356 CDCA5Q96FF9 252 aa27.46■■□□□ 1.99
SREBF1-208ENST00000469356 TMEM39BQ9GZU3 492 aa27.46■■□□□ 1.99
SREBF1-208ENST00000469356 MYH1P12882 1939 aa27.46■■□□□ 1.99
SREBF1-208ENST00000469356 EIF5BO60841 1220 aaKnown RBP27.45■■□□□ 1.99
SREBF1-208ENST00000469356 ITGBL1O95965 494 aaPredicted RBP27.45■■□□□ 1.99
SREBF1-208ENST00000469356 POLR3DP05423 398 aaPredicted RBP27.45■■□□□ 1.99
SREBF1-208ENST00000469356 DCP1AQ9NPI6 582 aaPredicted RBP27.45■■□□□ 1.99
SREBF1-208ENST00000469356 SCAF8Q9UPN6 1271 aaKnown RBP27.45■■□□□ 1.99
SREBF1-208ENST00000469356 DCAF15Q66K64 600 aa27.44■■□□□ 1.98
SREBF1-208ENST00000469356 CCDC129Q6ZRS4 1044 aa27.44■■□□□ 1.98
SREBF1-208ENST00000469356 KIAA1211Q6ZU35 1233 aa27.44■■□□□ 1.98
SREBF1-208ENST00000469356 MCM9Q9NXL9 1143 aa27.44■■□□□ 1.98
SREBF1-208ENST00000469356 PRKAB2O43741 272 aa27.43■■□□□ 1.98
SREBF1-208ENST00000469356 TDO2P48775 406 aa27.43■■□□□ 1.98
SREBF1-208ENST00000469356 CSRNP1Q96S65 589 aa27.43■■□□□ 1.98
SREBF1-208ENST00000469356 TRIM34Q9BYJ4 488 aa27.43■■□□□ 1.98
SREBF1-208ENST00000469356 PI4KBQ9UBF8 816 aa27.43■■□□□ 1.98
SREBF1-208ENST00000469356 TRPM7Q96QT4 1865 aa27.43■■□□□ 1.98
SREBF1-208ENST00000469356 ATRNL1Q5VV63 1379 aa27.43■■□□□ 1.98
SREBF1-208ENST00000469356 GSG1L2A8MUP6 293 aa27.42■■□□□ 1.98
SREBF1-208ENST00000469356 SGSM2O43147 1006 aa27.42■■□□□ 1.98
SREBF1-208ENST00000469356 PPP1R12BO60237 982 aaPredicted RBP27.42■■□□□ 1.98
SREBF1-208ENST00000469356 IFNL3Q8IZI9 196 aa27.42■■□□□ 1.98
SREBF1-208ENST00000469356 NAPBQ9H115 298 aa27.42■■□□□ 1.98
SREBF1-208ENST00000469356 ARPP21Q9UBL0 812 aaPredicted RBP27.42■■□□□ 1.98
SREBF1-208ENST00000469356 TAOK2Q9UL54 1235 aa27.42■■□□□ 1.98
SREBF1-208ENST00000469356 NAV1Q8NEY1 1877 aa27.42■■□□□ 1.98
SREBF1-208ENST00000469356 TRAF5O00463 557 aa27.41■■□□□ 1.98
SREBF1-208ENST00000469356 NBPF12Q5TAG4 269 aaPredicted RBP27.41■■□□□ 1.98
SREBF1-208ENST00000469356 ZNF589Q86UQ0 364 aaPredicted RBP27.41■■□□□ 1.98
SREBF1-208ENST00000469356 FOXP4Q8IVH2 680 aaPredicted RBP27.41■■□□□ 1.98
SREBF1-208ENST00000469356 TEPSINQ96N21 525 aa27.41■■□□□ 1.98
SREBF1-208ENST00000469356 ESYT1Q9BSJ8 1104 aa27.41■■□□□ 1.98
SREBF1-208ENST00000469356 MKRN1Q9UHC7 482 aaKnown RBP27.41■■□□□ 1.98
SREBF1-208ENST00000469356 SAP30BPQ9UHR5 308 aaKnown RBP27.41■■□□□ 1.98
SREBF1-208ENST00000469356 FKBP1BP68106 108 aa27.41■■□□□ 1.98
SREBF1-208ENST00000469356 ALX1Q15699 326 aa27.41■■□□□ 1.98
SREBF1-208ENST00000469356 ZFPM1Q8IX07 1006 aa27.41■■□□□ 1.98
SREBF1-208ENST00000469356 DSCC1Q9BVC3 393 aa27.41■■□□□ 1.98
SREBF1-208ENST00000469356 ZNF408Q9H9D4 720 aa27.41■■□□□ 1.98
SREBF1-208ENST00000469356 PASKQ96RG2 1323 aa27.4■■□□□ 1.98
SREBF1-208ENST00000469356 DDTLA6NHG4 134 aaPredicted RBP27.4■■□□□ 1.98
SREBF1-208ENST00000469356 CELF2O95319 508 aaKnown RBP27.4■■□□□ 1.98
SREBF1-208ENST00000469356 HSPD1P10809 573 aaKnown RBP27.4■■□□□ 1.98
SREBF1-208ENST00000469356 PRAMEF18Q5VWM3 479 aa27.4■■□□□ 1.98
SREBF1-208ENST00000469356 ARMC9Q7Z3E5 817 aa27.4■■□□□ 1.98
SREBF1-208ENST00000469356 C2orf69Q8N8R5 385 aa27.4■■□□□ 1.98
SREBF1-208ENST00000469356 CTNNA3Q9UI47 895 aa27.4■■□□□ 1.98
SREBF1-208ENST00000469356 HERC5Q9UII4 1024 aaKnown RBP27.4■■□□□ 1.98
SREBF1-208ENST00000469356 PALD1Q9ULE6 856 aa27.4■■□□□ 1.98
SREBF1-208ENST00000469356 BAZ2AQ9UIF9 1905 aaKnown RBP27.39■■□□□ 1.97
SREBF1-208ENST00000469356 TTLL12Q14166 644 aaPredicted RBP27.39■■□□□ 1.97
SREBF1-208ENST00000469356 SBK1Q52WX2 424 aa27.39■■□□□ 1.97
SREBF1-208ENST00000469356 CRACR2BQ8N4Y2 399 aaPredicted RBP27.39■■□□□ 1.97
SREBF1-208ENST00000469356 USP17L12C9JPN9 530 aa27.38■■□□□ 1.97
SREBF1-208ENST00000469356 USP17L21D6R901 530 aa27.38■■□□□ 1.97
SREBF1-208ENST00000469356 TBC1D12O60347 775 aa27.38■■□□□ 1.97
SREBF1-208ENST00000469356 SLC3A2P08195 630 aaKnown RBP27.38■■□□□ 1.97
SREBF1-208ENST00000469356 ZNF341Q9BYN7 854 aa27.38■■□□□ 1.97
SREBF1-208ENST00000469356 ZMYM6O95789 1325 aa27.37■■□□□ 1.97
SREBF1-208ENST00000469356 IREB2P48200 963 aaKnown RBP27.37■■□□□ 1.97
SREBF1-208ENST00000469356 SH3BP5LQ7L8J4 393 aa27.37■■□□□ 1.97
SREBF1-208ENST00000469356 EHD4Q9H223 541 aa27.37■■□□□ 1.97
SREBF1-208ENST00000469356 GBA2Q9HCG7 927 aaPredicted RBP27.37■■□□□ 1.97
SREBF1-208ENST00000469356 CTR9Q6PD62 1173 aa27.36■■□□□ 1.97
SREBF1-208ENST00000469356 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.36■■□□□ 1.97
SREBF1-208ENST00000469356 ZNF287Q9HBT7 754 aa27.36■■□□□ 1.97
SREBF1-208ENST00000469356 SERPINB13Q9UIV8 391 aa27.36■■□□□ 1.97
SREBF1-208ENST00000469356 MINDY4BA8MYZ0 360 aa27.35■■□□□ 1.97
SREBF1-208ENST00000469356 C12orf60Q5U649 245 aa27.35■■□□□ 1.97
SREBF1-208ENST00000469356 VPS53Q5VIR6 699 aa27.35■■□□□ 1.97
SREBF1-208ENST00000469356 EPB41L4AQ9HCS5 686 aaPredicted RBP27.35■■□□□ 1.97
SREBF1-208ENST00000469356 SWAP70Q9UH65 585 aa27.35■■□□□ 1.97
SREBF1-208ENST00000469356 UNCXA6NJT0 531 aa27.34■■□□□ 1.97
SREBF1-208ENST00000469356 TMEM88BA6NKF7 163 aa27.34■■□□□ 1.97
SREBF1-208ENST00000469356 REC8O95072 547 aa27.34■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms