RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 ECE1P42892 770 aa17.54■□□□□ 0.4
SQSTM1-205ENST00000464493 IREB2P48200 963 aaKnown RBP17.54■□□□□ 0.4
SQSTM1-205ENST00000464493 UBE3CQ15386 1083 aa17.54■□□□□ 0.4
SQSTM1-205ENST00000464493 MAP3K11Q16584 847 aa17.54■□□□□ 0.4
SQSTM1-205ENST00000464493 SLFNL1Q499Z3 407 aa17.54■□□□□ 0.4
SQSTM1-205ENST00000464493 CYP4F22Q6NT55 531 aa17.54■□□□□ 0.4
SQSTM1-205ENST00000464493 ZSCAN29Q8IWY8 852 aaPredicted RBP17.54■□□□□ 0.4
SQSTM1-205ENST00000464493 TGFBRAP1Q8WUH2 860 aa17.54■□□□□ 0.4
SQSTM1-205ENST00000464493 CAPNS2Q96L46 248 aa17.54■□□□□ 0.4
SQSTM1-205ENST00000464493 RIOK1Q9BRS2 568 aaKnown RBP17.54■□□□□ 0.4
SQSTM1-205ENST00000464493 OSBPL3Q9H4L5 887 aa17.54■□□□□ 0.4
SQSTM1-205ENST00000464493 MYH7P12883 1935 aa17.54■□□□□ 0.4
SQSTM1-205ENST00000464493 PCNTO95613 3336 aa17.54■□□□□ 0.4
SQSTM1-205ENST00000464493 WDR33Q9C0J8 1336 aaKnown RBP17.53■□□□□ 0.4
SQSTM1-205ENST00000464493 CHGBP05060 677 aa17.53■□□□□ 0.4
SQSTM1-205ENST00000464493 ZNF157P51786 506 aaPredicted RBP17.53■□□□□ 0.4
SQSTM1-205ENST00000464493 GRM1Q13255 1194 aa17.53■□□□□ 0.4
SQSTM1-205ENST00000464493 LRRFIP1Q32MZ4 808 aaKnown RBP17.53■□□□□ 0.4
SQSTM1-205ENST00000464493 LDLRAD1Q5T700 205 aa17.53■□□□□ 0.4
SQSTM1-205ENST00000464493 MIGA2Q7L4E1 593 aa17.53■□□□□ 0.4
SQSTM1-205ENST00000464493 SH3BP5LQ7L8J4 393 aa17.53■□□□□ 0.4
SQSTM1-205ENST00000464493 OSBPL5Q9H0X9 879 aaPredicted RBP17.53■□□□□ 0.4
SQSTM1-205ENST00000464493 DDTLA6NHG4 134 aaPredicted RBP17.52■□□□□ 0.4
SQSTM1-205ENST00000464493 RNF113AO15541 343 aaKnown RBP17.52■□□□□ 0.4
SQSTM1-205ENST00000464493 ZFYP08048 801 aaPredicted RBP17.52■□□□□ 0.4
SQSTM1-205ENST00000464493 DCAF15Q66K64 600 aa17.52■□□□□ 0.4
SQSTM1-205ENST00000464493 MAPKAPK5Q8IW41 473 aa17.52■□□□□ 0.4
SQSTM1-205ENST00000464493 CCDC102AQ96A19 550 aa17.52■□□□□ 0.4
SQSTM1-205ENST00000464493 EVI5LQ96CN4 794 aa17.52■□□□□ 0.4
SQSTM1-205ENST00000464493 CSRNP1Q96S65 589 aa17.52■□□□□ 0.4
SQSTM1-205ENST00000464493 FSD1Q9BTV5 496 aa17.52■□□□□ 0.4
SQSTM1-205ENST00000464493 UNCXA6NJT0 531 aa17.51■□□□□ 0.39
SQSTM1-205ENST00000464493 PDE4AP27815 886 aa17.51■□□□□ 0.39
SQSTM1-205ENST00000464493 USP5P45974 858 aa17.51■□□□□ 0.39
SQSTM1-205ENST00000464493 CENPQQ7L2Z9 268 aaPredicted RBP17.51■□□□□ 0.39
SQSTM1-205ENST00000464493 CDK5RAP2Q96SN8 1893 aa17.51■□□□□ 0.39
SQSTM1-205ENST00000464493 FLT1P17948 1338 aa17.5■□□□□ 0.39
SQSTM1-205ENST00000464493 FOCADQ5VW36 1801 aa17.5■□□□□ 0.39
SQSTM1-205ENST00000464493 ANKRD13AQ8IZ07 590 aa17.5■□□□□ 0.39
SQSTM1-205ENST00000464493 LCORLQ8N3X6 602 aa17.5■□□□□ 0.39
SQSTM1-205ENST00000464493 SLC10A4Q96EP9 437 aa17.5■□□□□ 0.39
SQSTM1-205ENST00000464493 CCDC136Q96JN2 1154 aa17.5■□□□□ 0.39
SQSTM1-205ENST00000464493 ZNF341Q9BYN7 854 aa17.5■□□□□ 0.39
SQSTM1-205ENST00000464493 CRNKL1Q9BZJ0 848 aaKnown RBP17.5■□□□□ 0.39
SQSTM1-205ENST00000464493 PUS7LQ9H0K6 701 aaKnown RBP17.5■□□□□ 0.39
SQSTM1-205ENST00000464493 DHX36Q9H2U1 1008 aaKnown RBP17.5■□□□□ 0.39
SQSTM1-205ENST00000464493 ATRNL1Q5VV63 1379 aa17.5■□□□□ 0.39
SQSTM1-205ENST00000464493 TRIM6-TRIM34B2RNG4 842 aa17.49■□□□□ 0.39
SQSTM1-205ENST00000464493 MBD4O95243 580 aa17.49■□□□□ 0.39
SQSTM1-205ENST00000464493 MAP3K9P80192 1104 aa17.49■□□□□ 0.39
SQSTM1-205ENST00000464493 JMYQ8N9B5 988 aa17.49■□□□□ 0.39
SQSTM1-205ENST00000464493 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.49■□□□□ 0.39
SQSTM1-205ENST00000464493 APPBP2Q92624 585 aa17.49■□□□□ 0.39
SQSTM1-205ENST00000464493 AIDAQ96BJ3 306 aa17.49■□□□□ 0.39
SQSTM1-205ENST00000464493 ARMT1Q9H993 441 aa17.49■□□□□ 0.39
SQSTM1-205ENST00000464493 COL2A1P02458 1487 aaPredicted RBP17.49■□□□□ 0.39
SQSTM1-205ENST00000464493 FAM155AB1AL88 458 aaPredicted RBP17.48■□□□□ 0.39
SQSTM1-205ENST00000464493 AOC2O75106 756 aa17.48■□□□□ 0.39
SQSTM1-205ENST00000464493 SLC10A3P09131 477 aa17.48■□□□□ 0.39
SQSTM1-205ENST00000464493 MAP2K2P36507 400 aa17.48■□□□□ 0.39
SQSTM1-205ENST00000464493 MAP3K10Q02779 954 aa17.48■□□□□ 0.39
SQSTM1-205ENST00000464493 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.48■□□□□ 0.39
SQSTM1-205ENST00000464493 RASAL3Q86YV0 1011 aa17.48■□□□□ 0.39
SQSTM1-205ENST00000464493 OSBP2Q969R2 916 aa17.48■□□□□ 0.39
SQSTM1-205ENST00000464493 CLMNQ96JQ2 1002 aa17.48■□□□□ 0.39
SQSTM1-205ENST00000464493 WRNIP1Q96S55 665 aa17.48■□□□□ 0.39
SQSTM1-205ENST00000464493 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.48■□□□□ 0.39
SQSTM1-205ENST00000464493 PI4KBQ9UBF8 816 aa17.48■□□□□ 0.39
SQSTM1-205ENST00000464493 SAP30BPQ9UHR5 308 aaKnown RBP17.48■□□□□ 0.39
SQSTM1-205ENST00000464493 PALD1Q9ULE6 856 aa17.48■□□□□ 0.39
SQSTM1-205ENST00000464493 TBC1D12O60347 775 aa17.47■□□□□ 0.39
SQSTM1-205ENST00000464493 NOGQ13253 232 aa17.47■□□□□ 0.39
SQSTM1-205ENST00000464493 ERICH6BQ5W0A0 696 aa17.47■□□□□ 0.39
SQSTM1-205ENST00000464493 SDR42E1Q8WUS8 393 aa17.47■□□□□ 0.39
SQSTM1-205ENST00000464493 RILPL2Q969X0 211 aa17.47■□□□□ 0.39
SQSTM1-205ENST00000464493 ZNF112Q9UJU3 913 aa17.47■□□□□ 0.39
SQSTM1-205ENST00000464493 CSADQ9Y600 493 aa17.47■□□□□ 0.39
SQSTM1-205ENST00000464493 VGLL4Q14135 290 aa17.46■□□□□ 0.39
SQSTM1-205ENST00000464493 TICAM2Q86XR7 235 aa17.46■□□□□ 0.39
SQSTM1-205ENST00000464493 ZKSCAN4Q969J2 545 aaPredicted RBP17.46■□□□□ 0.39
SQSTM1-205ENST00000464493 STRBPQ96SI9 672 aaKnown RBP17.46■□□□□ 0.39
SQSTM1-205ENST00000464493 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.46■□□□□ 0.396e-7■□□□□ 10.6
SQSTM1-205ENST00000464493 ATP8A2Q9NTI2 1148 aa17.46■□□□□ 0.39
SQSTM1-205ENST00000464493 SLC4A4Q9Y6R1 1079 aa17.46■□□□□ 0.39
SQSTM1-205ENST00000464493 MYH1P12882 1939 aa17.46■□□□□ 0.39
SQSTM1-205ENST00000464493 PHF20L1A8MW92 1017 aa17.45■□□□□ 0.38
SQSTM1-205ENST00000464493 PRKAB2O43741 272 aa17.45■□□□□ 0.38
SQSTM1-205ENST00000464493 HLA-DOAP06340 250 aa17.45■□□□□ 0.38
SQSTM1-205ENST00000464493 SLURP2P0DP57 97 aa17.45■□□□□ 0.38
SQSTM1-205ENST00000464493 INPP5BP32019 993 aa17.45■□□□□ 0.38
SQSTM1-205ENST00000464493 ZMYM1Q5SVZ6 1142 aa17.45■□□□□ 0.38
SQSTM1-205ENST00000464493 FOXP4Q8IVH2 680 aaPredicted RBP17.45■□□□□ 0.38
SQSTM1-205ENST00000464493 ELP3Q9H9T3 547 aa17.45■□□□□ 0.38
SQSTM1-205ENST00000464493 DCP1AQ9NPI6 582 aaPredicted RBP17.45■□□□□ 0.38
SQSTM1-205ENST00000464493 HERC5Q9UII4 1024 aaKnown RBP17.45■□□□□ 0.38
SQSTM1-205ENST00000464493 OTOFQ9HC10 1997 aa17.45■□□□□ 0.38
SQSTM1-205ENST00000464493 M0R2C6 588 aa17.44■□□□□ 0.38
SQSTM1-205ENST00000464493 POLR3DP05423 398 aaPredicted RBP17.44■□□□□ 0.38
SQSTM1-205ENST00000464493 KIF23Q02241 960 aaPredicted RBP17.44■□□□□ 0.38
SQSTM1-205ENST00000464493 SLC4A8Q2Y0W8 1093 aa17.44■□□□□ 0.38
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