RNA–Protein interactions for RNA: ENST00000463058.5

HHLA3-204, Transcript of HERV-H LTR-associating 3, humanhuman

TSL 2

Gene HHLA3, Length 832 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3-204ENST00000463058 PDZRN3Q9UPQ7 1066 aa8.65□□□□□ -1.02
HHLA3-204ENST00000463058 LRRFIP2Q9Y608 721 aaKnown RBP8.65□□□□□ -1.02
HHLA3-204ENST00000463058 UTYO14607 1347 aa8.64□□□□□ -1.03
HHLA3-204ENST00000463058 NPR1P16066 1061 aa8.64□□□□□ -1.03
HHLA3-204ENST00000463058 CTSWP56202 376 aa8.64□□□□□ -1.03
HHLA3-204ENST00000463058 SF3B3Q15393 1217 aaKnown RBP8.64□□□□□ -1.03
HHLA3-204ENST00000463058 OXLD1Q5BKU9 147 aa8.64□□□□□ -1.03
HHLA3-204ENST00000463058 TAF7LQ5H9L4 462 aa8.64□□□□□ -1.03
HHLA3-204ENST00000463058 EPHA10Q5JZY3 1008 aa8.64□□□□□ -1.03
HHLA3-204ENST00000463058 PPP1R18Q6NYC8 613 aa8.64□□□□□ -1.03
HHLA3-204ENST00000463058 ANKMY2Q8IV38 441 aa8.64□□□□□ -1.03
HHLA3-204ENST00000463058 TTLL11Q8NHH1 800 aa8.64□□□□□ -1.03
HHLA3-204ENST00000463058 MASTLQ96GX5 879 aa8.64□□□□□ -1.03
HHLA3-204ENST00000463058 ZNF594Q96JF6 807 aaPredicted RBP8.64□□□□□ -1.03
HHLA3-204ENST00000463058 PLA2G12BQ9BX93 195 aa8.64□□□□□ -1.03
HHLA3-204ENST00000463058 BICC1Q9H694 974 aaKnown RBP8.64□□□□□ -1.03
HHLA3-204ENST00000463058 RRAGCQ9HB90 399 aa8.64□□□□□ -1.03
HHLA3-204ENST00000463058 ANKRD18BA2A2Z9 1011 aa8.63□□□□□ -1.03
HHLA3-204ENST00000463058 SRGNP10124 158 aa8.63□□□□□ -1.03
HHLA3-204ENST00000463058 ALDH1B1P30837 517 aa8.63□□□□□ -1.03
HHLA3-204ENST00000463058 FOXO4P98177 505 aa8.63□□□□□ -1.03
HHLA3-204ENST00000463058 RASSF7Q02833 373 aa8.63□□□□□ -1.03
HHLA3-204ENST00000463058 IFIT5Q13325 482 aaKnown RBP8.63□□□□□ -1.03
HHLA3-204ENST00000463058 CCDC57Q2TAC2 916 aa8.63□□□□□ -1.03
HHLA3-204ENST00000463058 C16orf71Q8IYS4 520 aaPredicted RBP8.63□□□□□ -1.03
HHLA3-204ENST00000463058 TTLL6Q8N841 843 aa8.63□□□□□ -1.03
HHLA3-204ENST00000463058 EXOC6Q8TAG9 804 aa8.63□□□□□ -1.03
HHLA3-204ENST00000463058 CNKSR1Q969H4 720 aa8.63□□□□□ -1.03
HHLA3-204ENST00000463058 TMX4Q9H1E5 349 aaPredicted RBP8.63□□□□□ -1.03
HHLA3-204ENST00000463058 GREM2Q9H772 168 aa8.63□□□□□ -1.03
HHLA3-204ENST00000463058 ARFGEF1Q9Y6D6 1849 aa8.63□□□□□ -1.03
HHLA3-204ENST00000463058 KDM2BQ8NHM5 1336 aa8.62□□□□□ -1.03
HHLA3-204ENST00000463058 KLRG2A4D1S0 409 aaPredicted RBP8.62□□□□□ -1.03
HHLA3-204ENST00000463058 CSF1RP07333 972 aa8.62□□□□□ -1.03
HHLA3-204ENST00000463058 ITGA6P23229 1130 aa8.62□□□□□ -1.03
HHLA3-204ENST00000463058 PRELPP51888 382 aa8.62□□□□□ -1.03
HHLA3-204ENST00000463058 WNT7BP56706 349 aa8.62□□□□□ -1.03
HHLA3-204ENST00000463058 DPYDQ12882 1025 aa8.62□□□□□ -1.03
HHLA3-204ENST00000463058 STYK1Q6J9G0 422 aa8.62□□□□□ -1.03
HHLA3-204ENST00000463058 ANKRD18AQ8IVF6 992 aa8.62□□□□□ -1.03
HHLA3-204ENST00000463058 SIX5Q8N196 739 aa8.62□□□□□ -1.03
HHLA3-204ENST00000463058 KAZALD1Q96I82 304 aa8.62□□□□□ -1.03
HHLA3-204ENST00000463058 CRAMP1Q96RY5 1269 aa8.62□□□□□ -1.03
HHLA3-204ENST00000463058 CDC5LQ99459 802 aaKnown RBP8.62□□□□□ -1.03
HHLA3-204ENST00000463058 SEC31BQ9NQW1 1179 aa8.62□□□□□ -1.03
HHLA3-204ENST00000463058 ZBTB40Q9NUA8 1239 aa8.62□□□□□ -1.03
HHLA3-204ENST00000463058 DNAAF2Q9NVR5 837 aaKnown RBP8.62□□□□□ -1.03
HHLA3-204ENST00000463058 NOD1Q9Y239 953 aa8.62□□□□□ -1.03
HHLA3-204ENST00000463058 PCDHGA11Q9Y5H2 935 aa8.62□□□□□ -1.03
HHLA3-204ENST00000463058 IVNS1ABPQ9Y6Y0 642 aa8.62□□□□□ -1.03
HHLA3-204ENST00000463058 CACNA1FO60840 1977 aa8.62□□□□□ -1.03
HHLA3-204ENST00000463058 SCN7AQ01118 1682 aa8.62□□□□□ -1.03
HHLA3-204ENST00000463058 SRGAP3O43295 1099 aa8.61□□□□□ -1.03
HHLA3-204ENST00000463058 HOXA10P31260 410 aaPredicted RBP8.61□□□□□ -1.03
HHLA3-204ENST00000463058 IGHMBP2P38935 993 aaKnown RBP8.61□□□□□ -1.03
HHLA3-204ENST00000463058 SCTRP47872 440 aa8.61□□□□□ -1.03
HHLA3-204ENST00000463058 RPS8P62241 208 aaKnown RBP8.61□□□□□ -1.03
HHLA3-204ENST00000463058 GTF2IP78347 998 aa8.61□□□□□ -1.03
HHLA3-204ENST00000463058 FSTL1Q12841 308 aa8.61□□□□□ -1.03
HHLA3-204ENST00000463058 GRAPQ13588 217 aa8.61□□□□□ -1.03
HHLA3-204ENST00000463058 NBPF20Q3BBV1 942 aa8.61□□□□□ -1.03
HHLA3-204ENST00000463058 CRY2Q49AN0 593 aa8.61□□□□□ -1.03
HHLA3-204ENST00000463058 INTS6LQ5JSJ4 861 aaKnown RBP8.61□□□□□ -1.03
HHLA3-204ENST00000463058 LIAT1Q6ZQX7 453 aa8.61□□□□□ -1.03
HHLA3-204ENST00000463058 ANKRD44Q8N8A2 993 aa8.61□□□□□ -1.03
HHLA3-204ENST00000463058 GRAPLQ8TC17 118 aaPredicted RBP8.61□□□□□ -1.03
HHLA3-204ENST00000463058 KCTD15Q96SI1 283 aaPredicted RBP8.61□□□□□ -1.03
HHLA3-204ENST00000463058 MPHOSPH8Q99549 860 aa8.61□□□□□ -1.03
HHLA3-204ENST00000463058 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.61□□□□□ -1.03
HHLA3-204ENST00000463058 PCDHB11Q9Y5F2 797 aa8.61□□□□□ -1.03
HHLA3-204ENST00000463058 NUP98P52948 1817 aa8.61□□□□□ -1.03
HHLA3-204ENST00000463058 C21orf2O43822 256 aa8.6□□□□□ -1.03
HHLA3-204ENST00000463058 HMMRO75330 724 aa8.6□□□□□ -1.03
HHLA3-204ENST00000463058 BBOX1O75936 387 aa8.6□□□□□ -1.03
HHLA3-204ENST00000463058 ATP8B2P98198 1209 aa8.6□□□□□ -1.03
HHLA3-204ENST00000463058 RABL6Q3YEC7 729 aaPredicted RBP8.6□□□□□ -1.03
HHLA3-204ENST00000463058 PRPF40BQ6NWY9 871 aaKnown RBP8.6□□□□□ -1.03
HHLA3-204ENST00000463058 FAM200AQ8TCP9 573 aa8.6□□□□□ -1.03
HHLA3-204ENST00000463058 CELF1Q92879 486 aaKnown RBP8.6□□□□□ -1.03
HHLA3-204ENST00000463058 CLP1Q92989 425 aaKnown RBP8.6□□□□□ -1.03
HHLA3-204ENST00000463058 KLRG1Q96E93 195 aa8.6□□□□□ -1.03
HHLA3-204ENST00000463058 CNNM1Q9NRU3 951 aa8.6□□□□□ -1.03
HHLA3-204ENST00000463058 MAP4K5Q9Y4K4 846 aa8.6□□□□□ -1.03
HHLA3-204ENST00000463058 BCORQ6W2J9 1755 aa8.6□□□□□ -1.03
HHLA3-204ENST00000463058 ARFGEF2Q9Y6D5 1785 aa8.6□□□□□ -1.03
HHLA3-204ENST00000463058 SBF1O95248 1867 aa8.6□□□□□ -1.03
HHLA3-204ENST00000463058 AFDNP55196 1824 aaKnown RBP8.59□□□□□ -1.03
HHLA3-204ENST00000463058 PNMA6EA0A0J9YXQ4 647 aa8.59□□□□□ -1.03
HHLA3-204ENST00000463058 ZBTB24O43167 697 aaPredicted RBP8.59□□□□□ -1.03
HHLA3-204ENST00000463058 LMNB1P20700 586 aa8.59□□□□□ -1.03
HHLA3-204ENST00000463058 VARSP26640 1264 aaKnown RBP8.59□□□□□ -1.03
HHLA3-204ENST00000463058 RPIAP49247 311 aa8.59□□□□□ -1.03
HHLA3-204ENST00000463058 OS9Q13438 667 aaPredicted RBP8.59□□□□□ -1.03
HHLA3-204ENST00000463058 RNF20Q5VTR2 975 aa8.59□□□□□ -1.03
HHLA3-204ENST00000463058 CEP85Q6P2H3 762 aa8.59□□□□□ -1.03
HHLA3-204ENST00000463058 LDHAL6AQ6ZMR3 332 aa8.59□□□□□ -1.03
HHLA3-204ENST00000463058 TRIM50Q86XT4 487 aa8.59□□□□□ -1.03
HHLA3-204ENST00000463058 RPAP2Q8IXW5 612 aaPredicted RBP8.59□□□□□ -1.03
HHLA3-204ENST00000463058 LARGE2Q8N3Y3 721 aa8.59□□□□□ -1.03
HHLA3-204ENST00000463058 KLHDC4Q8TBB5 520 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms