RNA–Protein interactions for RNA: ENST00000463048.3

NUP43-205, Transcript of nucleoporin 43, humanhuman

TSL 3

Gene NUP43, Length 523 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-205ENST00000463048 CDK5RAP2Q96SN8 1893 aa24.41■■□□□ 1.5
NUP43-205ENST00000463048 SDSP20132 328 aa24.41■■□□□ 1.5
NUP43-205ENST00000463048 NF2P35240 595 aa24.41■■□□□ 1.5
NUP43-205ENST00000463048 TEPSINQ96N21 525 aa24.41■■□□□ 1.5
NUP43-205ENST00000463048 RFX7Q2KHR2 1363 aa24.41■■□□□ 1.5
NUP43-205ENST00000463048 TMEM88BA6NKF7 163 aa24.4■■□□□ 1.5
NUP43-205ENST00000463048 PRKAB2O43741 272 aa24.4■■□□□ 1.5
NUP43-205ENST00000463048 TMED8Q6PL24 325 aaPredicted RBP24.4■■□□□ 1.5
NUP43-205ENST00000463048 SDR42E1Q8WUS8 393 aa24.4■■□□□ 1.5
NUP43-205ENST00000463048 CRNKL1Q9BZJ0 848 aaKnown RBP24.4■■□□□ 1.5
NUP43-205ENST00000463048 ABT1Q9ULW3 272 aaKnown RBP24.4■■□□□ 1.5
NUP43-205ENST00000463048 FLT1P17948 1338 aa24.39■■□□□ 1.5
NUP43-205ENST00000463048 ENTPD3O75355 529 aa24.39■■□□□ 1.49
NUP43-205ENST00000463048 HSPA6P17066 643 aa24.39■■□□□ 1.49
NUP43-205ENST00000463048 SUPT20HL1Q3ZLR7 823 aa24.39■■□□□ 1.49
NUP43-205ENST00000463048 CCDC129Q6ZRS4 1044 aa24.39■■□□□ 1.49
NUP43-205ENST00000463048 FAM227BQ96M60 508 aa24.39■■□□□ 1.49
NUP43-205ENST00000463048 GBA2Q9HCG7 927 aaPredicted RBP24.39■■□□□ 1.49
NUP43-205ENST00000463048 SSC5DA1L4H1 1573 aa24.38■■□□□ 1.49
NUP43-205ENST00000463048 DDTLA6NHG4 134 aaPredicted RBP24.38■■□□□ 1.49
NUP43-205ENST00000463048 SLURP2P0DP57 97 aa24.38■■□□□ 1.49
NUP43-205ENST00000463048 NMIQ13287 307 aaPredicted RBP24.38■■□□□ 1.49
NUP43-205ENST00000463048 ZMYM1Q5SVZ6 1142 aa24.38■■□□□ 1.49
NUP43-205ENST00000463048 MIGA2Q7L4E1 593 aa24.38■■□□□ 1.49
NUP43-205ENST00000463048 SH3BP5LQ7L8J4 393 aa24.38■■□□□ 1.49
NUP43-205ENST00000463048 C2orf69Q8N8R5 385 aa24.38■■□□□ 1.49
NUP43-205ENST00000463048 OSBPL5Q9H0X9 879 aaPredicted RBP24.38■■□□□ 1.49
NUP43-205ENST00000463048 CERS3Q8IU89 383 aa24.37■■□□□ 1.49
NUP43-205ENST00000463048 CSRNP1Q96S65 589 aa24.37■■□□□ 1.49
NUP43-205ENST00000463048 SLC4A4Q9Y6R1 1079 aa24.37■■□□□ 1.49
NUP43-205ENST00000463048 FOCADQ5VW36 1801 aa24.36■■□□□ 1.49
NUP43-205ENST00000463048 A0A0D9SFI3 127 aa24.36■■□□□ 1.49
NUP43-205ENST00000463048 UBE2Q2LH0YL09 131 aa24.36■■□□□ 1.49
NUP43-205ENST00000463048 GPAA1O43292 621 aa24.36■■□□□ 1.49
NUP43-205ENST00000463048 DIAPH3Q9NSV4 1193 aa24.36■■□□□ 1.49
NUP43-205ENST00000463048 PALD1Q9ULE6 856 aa24.36■■□□□ 1.49
NUP43-205ENST00000463048 ANGEL1Q9UNK9 670 aaKnown RBP24.36■■□□□ 1.49
NUP43-205ENST00000463048 PAXIP1Q6ZW49 1069 aaPredicted RBP24.35■■□□□ 1.49
NUP43-205ENST00000463048 STRBPQ96SI9 672 aaKnown RBP24.35■■□□□ 1.49
NUP43-205ENST00000463048 FAM196BA6NMK8 535 aa24.34■■□□□ 1.49
NUP43-205ENST00000463048 CWC27Q6UX04 472 aaKnown RBP24.34■■□□□ 1.49
NUP43-205ENST00000463048 CREBZFQ9NS37 354 aa24.34■■□□□ 1.49
NUP43-205ENST00000463048 NAV1Q8NEY1 1877 aa24.34■■□□□ 1.49
NUP43-205ENST00000463048 RPAP1Q9BWH6 1393 aaPredicted RBP24.33■■□□□ 1.49
NUP43-205ENST00000463048 APPP05067 770 aa24.33■■□□□ 1.49
NUP43-205ENST00000463048 HUNKP57058 714 aa24.33■■□□□ 1.49
NUP43-205ENST00000463048 GRM1Q13255 1194 aa24.33■■□□□ 1.49
NUP43-205ENST00000463048 GTF3C3Q9Y5Q9 886 aa24.33■■□□□ 1.49
NUP43-205ENST00000463048 MYH1P12882 1939 aa24.33■■□□□ 1.49
NUP43-205ENST00000463048 PPP1R12BO60237 982 aaPredicted RBP24.32■■□□□ 1.48
NUP43-205ENST00000463048 ARMC9Q7Z3E5 817 aa24.32■■□□□ 1.48
NUP43-205ENST00000463048 DCP1AQ9NPI6 582 aaPredicted RBP24.32■■□□□ 1.48
NUP43-205ENST00000463048 HELLSQ9NRZ9 838 aa24.32■■□□□ 1.48
NUP43-205ENST00000463048 MCM9Q9NXL9 1143 aa24.32■■□□□ 1.48
NUP43-205ENST00000463048 MKRN1Q9UHC7 482 aaKnown RBP24.32■■□□□ 1.48
NUP43-205ENST00000463048 PAPPA2Q9BXP8 1791 aa24.31■■□□□ 1.48
NUP43-205ENST00000463048 USP2O75604 605 aaPredicted RBP24.31■■□□□ 1.48
NUP43-205ENST00000463048 NPM3O75607 178 aaKnown RBP24.31■■□□□ 1.48
NUP43-205ENST00000463048 POLR3DP05423 398 aaPredicted RBP24.31■■□□□ 1.48
NUP43-205ENST00000463048 CYP2D6P10635 497 aa24.31■■□□□ 1.48
NUP43-205ENST00000463048 EVX2Q03828 476 aa24.31■■□□□ 1.48
NUP43-205ENST00000463048 TLL2Q9Y6L7 1015 aa24.31■■□□□ 1.48
NUP43-205ENST00000463048 MCMDC2Q4G0Z9 681 aa24.3■■□□□ 1.48
NUP43-205ENST00000463048 DCAF15Q66K64 600 aa24.3■■□□□ 1.48
NUP43-205ENST00000463048 SAPCD2Q86UD0 394 aa24.3■■□□□ 1.48
NUP43-205ENST00000463048 ZNF589Q86UQ0 364 aaPredicted RBP24.3■■□□□ 1.48
NUP43-205ENST00000463048 BAZ2AQ9UIF9 1905 aaKnown RBP24.29■■□□□ 1.48
NUP43-205ENST00000463048 CYP2D7A0A087X1C5 515 aa24.29■■□□□ 1.48
NUP43-205ENST00000463048 GSG1L2A8MUP6 293 aa24.29■■□□□ 1.48
NUP43-205ENST00000463048 HIP1O00291 1037 aa24.29■■□□□ 1.48
NUP43-205ENST00000463048 HLA-DOAP06340 250 aa24.29■■□□□ 1.48
NUP43-205ENST00000463048 IREB2P48200 963 aaKnown RBP24.29■■□□□ 1.48
NUP43-205ENST00000463048 HOOK2Q96ED9 719 aa24.29■■□□□ 1.48
NUP43-205ENST00000463048 DDRGK1Q96HY6 314 aa24.29■■□□□ 1.48
NUP43-205ENST00000463048 ATRNL1Q5VV63 1379 aa24.29■■□□□ 1.48
NUP43-205ENST00000463048 VPS53Q5VIR6 699 aa24.28■■□□□ 1.48
NUP43-205ENST00000463048 CRACR2BQ8N4Y2 399 aaPredicted RBP24.28■■□□□ 1.48
NUP43-205ENST00000463048 CLMNQ96JQ2 1002 aa24.28■■□□□ 1.48
NUP43-205ENST00000463048 WRNIP1Q96S55 665 aa24.28■■□□□ 1.48
NUP43-205ENST00000463048 TRIM34Q9BYJ4 488 aa24.28■■□□□ 1.48
NUP43-205ENST00000463048 ZNF341Q9BYN7 854 aa24.28■■□□□ 1.48
NUP43-205ENST00000463048 DHX36Q9H2U1 1008 aaKnown RBP24.28■■□□□ 1.48
NUP43-205ENST00000463048 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.28■■□□□ 1.48
NUP43-205ENST00000463048 ATP8A2Q9NTI2 1148 aa24.28■■□□□ 1.48
NUP43-205ENST00000463048 GNAT2P19087 354 aa24.27■■□□□ 1.48
NUP43-205ENST00000463048 CHMLP26374 656 aa24.27■■□□□ 1.48
NUP43-205ENST00000463048 TDO2P48775 406 aa24.27■■□□□ 1.48
NUP43-205ENST00000463048 PLCD1P51178 756 aa24.27■■□□□ 1.48
NUP43-205ENST00000463048 FKBP1BP68106 108 aa24.27■■□□□ 1.48
NUP43-205ENST00000463048 BMP2KLQ5H9B9 411 aa24.27■■□□□ 1.48
NUP43-205ENST00000463048 STK11IPQ8N1F8 1099 aa24.27■■□□□ 1.48
NUP43-205ENST00000463048 EPB41L4AQ9HCS5 686 aaPredicted RBP24.27■■□□□ 1.48
NUP43-205ENST00000463048 PI4KBQ9UBF8 816 aa24.27■■□□□ 1.48
NUP43-205ENST00000463048 DDX60LQ5H9U9 1706 aaKnown RBP24.27■■□□□ 1.48
NUP43-205ENST00000463048 COL2A1P02458 1487 aaPredicted RBP24.26■■□□□ 1.47
NUP43-205ENST00000463048 SIPA1L1O43166 1804 aa24.26■■□□□ 1.47
NUP43-205ENST00000463048 PATL2C9JE40 543 aaKnown RBP24.26■■□□□ 1.47
NUP43-205ENST00000463048 USP17L12C9JPN9 530 aa24.26■■□□□ 1.47
NUP43-205ENST00000463048 USP17L21D6R901 530 aa24.26■■□□□ 1.47
NUP43-205ENST00000463048 SMIM22K7EJ46 135 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms