RNA–Protein interactions for RNA: ENST00000462990.5

PPP2R1A-205, Transcript of protein phosphatase 2 scaffold subunit Aalpha, human

TSL 2 BASIC

Gene PPP2R1A, Length 2,730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP2R1A-205	ENST00000462990	PGBD1	Q96JS3	809 aa		13.79	□□□□□ -0.2
PPP2R1A-205	ENST00000462990	PNKP	Q96T60	521 aa		13.79	□□□□□ -0.2
PPP2R1A-205	ENST00000462990	ZSWIM4	Q9H7M6	989 aa		13.79	□□□□□ -0.2
PPP2R1A-205	ENST00000462990	ANO10	Q9NW15	660 aa		13.79	□□□□□ -0.2
PPP2R1A-205	ENST00000462990	RBBP5	Q15291	538 aa	Known RBP	13.79	□□□□□ -0.2
PPP2R1A-205	ENST00000462990	CDC37L1	Q7L3B6	337 aa		13.79	□□□□□ -0.2
PPP2R1A-205	ENST00000462990	DHX58	Q96C10	678 aa		13.79	□□□□□ -0.2
PPP2R1A-205	ENST00000462990	ANKRD18B	A2A2Z9	1011 aa		13.78	□□□□□ -0.2
PPP2R1A-205	ENST00000462990	SHOX2	O60902	331 aa	Predicted RBP	13.78	□□□□□ -0.2
PPP2R1A-205	ENST00000462990	CEP57L1	Q8IYX8	460 aa		13.78	□□□□□ -0.2
PPP2R1A-205	ENST00000462990	MSANTD4	Q8NCY6	345 aa		13.78	□□□□□ -0.2
PPP2R1A-205	ENST00000462990	MICAL1	Q8TDZ2	1067 aa		13.78	□□□□□ -0.2
PPP2R1A-205	ENST00000462990	IL25	Q9H293	177 aa		13.78	□□□□□ -0.2
PPP2R1A-205	ENST00000462990	IFNK	Q9P0W0	207 aa		13.78	□□□□□ -0.2
PPP2R1A-205	ENST00000462990	USP21	Q9UK80	565 aa		13.78	□□□□□ -0.2
PPP2R1A-205	ENST00000462990	PA2G4	Q9UQ80	394 aa	Known RBP	13.78	□□□□□ -0.2
PPP2R1A-205	ENST00000462990	SNX14	Q9Y5W7	946 aa		13.78	□□□□□ -0.2
PPP2R1A-205	ENST00000462990	ADAMTS7	Q9UKP4	1686 aa		13.78	□□□□□ -0.2
PPP2R1A-205	ENST00000462990	FRMD3	A2A2Y4	597 aa		13.78	□□□□□ -0.2
PPP2R1A-205	ENST00000462990	KIN	O60870	393 aa	Known RBP	13.78	□□□□□ -0.2
PPP2R1A-205	ENST00000462990	KIF9	Q9HAQ2	790 aa		13.78	□□□□□ -0.2
PPP2R1A-205	ENST00000462990	KDM6A	O15550	1401 aa	Predicted RBP	13.78	□□□□□ -0.2
PPP2R1A-205	ENST00000462990	COQ9	O75208	318 aa		13.77	□□□□□ -0.2
PPP2R1A-205	ENST00000462990	FSBP	O95073	299 aa		13.77	□□□□□ -0.2
PPP2R1A-205	ENST00000462990	IBSP	P21815	317 aa	Predicted RBP	13.77	□□□□□ -0.2
PPP2R1A-205	ENST00000462990	SRGAP1	Q7Z6B7	1085 aa		13.77	□□□□□ -0.2
PPP2R1A-205	ENST00000462990	NAT10	Q9H0A0	1025 aa	Known RBP	13.77	□□□□□ -0.2
PPP2R1A-205	ENST00000462990		A0A087WWV3	80 aa		13.77	□□□□□ -0.21
PPP2R1A-205	ENST00000462990	PRPF6	O94906	941 aa	Known RBP	13.77	□□□□□ -0.21
PPP2R1A-205	ENST00000462990	SNUPN	O95149	360 aa	Known RBP	13.77	□□□□□ -0.21
PPP2R1A-205	ENST00000462990	TAT	P17735	454 aa	Predicted RBP	13.77	□□□□□ -0.21
PPP2R1A-205	ENST00000462990	RPS6KA3	P51812	740 aa		13.77	□□□□□ -0.21
PPP2R1A-205	ENST00000462990	KSR2	Q6VAB6	950 aa		13.77	□□□□□ -0.21
PPP2R1A-205	ENST00000462990	SMARCC1	Q92922	1105 aa	Predicted RBP	13.77	□□□□□ -0.21
PPP2R1A-205	ENST00000462990	MEGF6	O75095	1541 aa		13.77	□□□□□ -0.21
PPP2R1A-205	ENST00000462990	LRRIQ3	A6PVS8	624 aa	Predicted RBP	13.77	□□□□□ -0.21
PPP2R1A-205	ENST00000462990	SKAP2	O75563	359 aa	Predicted RBP	13.77	□□□□□ -0.21
PPP2R1A-205	ENST00000462990	WDHD1	O75717	1129 aa	Predicted RBP	13.77	□□□□□ -0.21
PPP2R1A-205	ENST00000462990	LARP1	Q6PKG0	1096 aa	Known RBP	13.77	□□□□□ -0.21
PPP2R1A-205	ENST00000462990	FCHSD1	Q86WN1	690 aa		13.77	□□□□□ -0.21
PPP2R1A-205	ENST00000462990	KIFC2	Q96AC6	838 aa		13.77	□□□□□ -0.21
PPP2R1A-205	ENST00000462990	GBP3	Q9H0R5	595 aa		13.77	□□□□□ -0.21
PPP2R1A-205	ENST00000462990	STRN4	Q9NRL3	753 aa		13.77	□□□□□ -0.21
PPP2R1A-205	ENST00000462990	HYPK	Q9NX55	129 aa		13.77	□□□□□ -0.21
PPP2R1A-205	ENST00000462990	ATRN	O75882	1429 aa		13.76	□□□□□ -0.21
PPP2R1A-205	ENST00000462990	RAB11FIP3	O75154	756 aa		13.76	□□□□□ -0.21
PPP2R1A-205	ENST00000462990	SYF2	O95926	243 aa	Known RBP	13.76	□□□□□ -0.21
PPP2R1A-205	ENST00000462990	IRAK1	P51617	712 aa		13.76	□□□□□ -0.21
PPP2R1A-205	ENST00000462990	PSMD2	Q13200	908 aa		13.76	□□□□□ -0.21
PPP2R1A-205	ENST00000462990	ZNF790	Q6PG37	636 aa		13.76	□□□□□ -0.21
PPP2R1A-205	ENST00000462990	PPP2R2C	Q9Y2T4	447 aa		13.76	□□□□□ -0.21
PPP2R1A-205	ENST00000462990	SHTN1	A0MZ66	631 aa		13.76	□□□□□ -0.21
PPP2R1A-205	ENST00000462990	PDIA6	Q15084	440 aa		13.76	□□□□□ -0.21
PPP2R1A-205	ENST00000462990	KLHL23	Q8NBE8	558 aa		13.76	□□□□□ -0.21
PPP2R1A-205	ENST00000462990	BCAS4	Q8TDM0	211 aa		13.76	□□□□□ -0.21
PPP2R1A-205	ENST00000462990	PARD3B	Q8TEW8	1205 aa		13.76	□□□□□ -0.21
PPP2R1A-205	ENST00000462990	ZSCAN31	Q96LW9	406 aa	Predicted RBP	13.76	□□□□□ -0.21
PPP2R1A-205	ENST00000462990	SH2B1	Q9NRF2	756 aa	Predicted RBP	13.76	□□□□□ -0.21
PPP2R1A-205	ENST00000462990	KLC4	Q9NSK0	619 aa		13.76	□□□□□ -0.21
PPP2R1A-205	ENST00000462990	CDHR2	Q9BYE9	1310 aa		13.75	□□□□□ -0.21
PPP2R1A-205	ENST00000462990	CUTA	O60888	179 aa		13.75	□□□□□ -0.21
PPP2R1A-205	ENST00000462990	PHKG2	P15735	406 aa		13.75	□□□□□ -0.21
PPP2R1A-205	ENST00000462990	AARS	P49588	968 aa	Known RBP eCLIP	13.75	□□□□□ -0.21
PPP2R1A-205	ENST00000462990	CEP85L	Q5SZL2	805 aa		13.75	□□□□□ -0.21
PPP2R1A-205	ENST00000462990	POTEA	Q6S8J7	498 aa		13.75	□□□□□ -0.21
PPP2R1A-205	ENST00000462990	IGSF22	Q8N9C0	903 aa		13.75	□□□□□ -0.21
PPP2R1A-205	ENST00000462990	KAT14	Q9H8E8	782 aa		13.75	□□□□□ -0.21
PPP2R1A-205	ENST00000462990	GOLGA6L9	A6NEM1	432 aa		13.75	□□□□□ -0.21
PPP2R1A-205	ENST00000462990	CCT2	P78371	535 aa	Known RBP	13.75	□□□□□ -0.21
PPP2R1A-205	ENST00000462990	ACTN3	Q08043	901 aa	Predicted RBP	13.75	□□□□□ -0.21
PPP2R1A-205	ENST00000462990	NAA25	Q14CX7	972 aa		13.75	□□□□□ -0.21
PPP2R1A-205	ENST00000462990	RASEF	Q8IZ41	740 aa		13.75	□□□□□ -0.21
PPP2R1A-205	ENST00000462990	PI4K2B	Q8TCG2	481 aa		13.75	□□□□□ -0.21
PPP2R1A-205	ENST00000462990	SLC52A2	Q9HAB3	445 aa		13.75	□□□□□ -0.21
PPP2R1A-205	ENST00000462990	DDX20	Q9UHI6	824 aa	Known RBP	13.75	□□□□□ -0.21
PPP2R1A-205	ENST00000462990	KIAA0754	O94854	1291 aa		13.74	□□□□□ -0.21
PPP2R1A-205	ENST00000462990	CPA1	P15085	419 aa		13.74	□□□□□ -0.21
PPP2R1A-205	ENST00000462990	PECAM1	P16284	738 aa	Predicted RBP	13.74	□□□□□ -0.21
PPP2R1A-205	ENST00000462990	PDC	P20941	246 aa		13.74	□□□□□ -0.21
PPP2R1A-205	ENST00000462990	VSNL1	P62760	191 aa		13.74	□□□□□ -0.21
PPP2R1A-205	ENST00000462990	RIC3	Q7Z5B4	369 aa		13.74	□□□□□ -0.21
PPP2R1A-205	ENST00000462990	CEP57	Q86XR8	500 aa		13.74	□□□□□ -0.21
PPP2R1A-205	ENST00000462990	KIRREL3	Q8IZU9	778 aa		13.74	□□□□□ -0.21
PPP2R1A-205	ENST00000462990	ZNF496	Q96IT1	587 aa	Predicted RBP	13.74	□□□□□ -0.21
PPP2R1A-205	ENST00000462990	PUF60	Q9UHX1	559 aa	Known RBP	13.74	□□□□□ -0.21
PPP2R1A-205	ENST00000462990	GLI3	P10071	1580 aa		13.74	□□□□□ -0.21
PPP2R1A-205	ENST00000462990	WDR17	Q8IZU2	1322 aa		13.74	□□□□□ -0.21
PPP2R1A-205	ENST00000462990	ATXN2	Q99700	1313 aa	Known RBP	13.74	□□□□□ -0.21
PPP2R1A-205	ENST00000462990	ST3GAL1	Q11201	340 aa		13.74	□□□□□ -0.21
PPP2R1A-205	ENST00000462990	MTA1	Q13330	715 aa		13.74	□□□□□ -0.21
PPP2R1A-205	ENST00000462990	VPS72	Q15906	364 aa		13.74	□□□□□ -0.21
PPP2R1A-205	ENST00000462990	SUCLG2	Q96I99	432 aa		13.74	□□□□□ -0.21
PPP2R1A-205	ENST00000462990	DDX21	Q9NR30	783 aa	Known RBP eCLIP	13.74	□□□□□ -0.21
PPP2R1A-205	ENST00000462990	SPG7	Q9UQ90	795 aa		13.74	□□□□□ -0.21
PPP2R1A-205	ENST00000462990	C5	P01031	1676 aa		13.74	□□□□□ -0.21
PPP2R1A-205	ENST00000462990	SCN11A	Q9UI33	1791 aa		13.74	□□□□□ -0.21
PPP2R1A-205	ENST00000462990	ALDH1L1	O75891	902 aa		13.73	□□□□□ -0.21
PPP2R1A-205	ENST00000462990	SNX1	Q13596	522 aa		13.73	□□□□□ -0.21
PPP2R1A-205	ENST00000462990	SLC5A9	Q2M3M2	681 aa		13.73	□□□□□ -0.21
PPP2R1A-205	ENST00000462990	TBC1D25	Q3MII6	688 aa		13.73	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms