RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 TRAF5O00463 557 aa7.65□□□□□ -1.18
SF3B1-206ENST00000462613 COL2A1P02458 1487 aaPredicted RBP7.65□□□□□ -1.18
SF3B1-206ENST00000462613 APPP05067 770 aa7.65□□□□□ -1.18
SF3B1-206ENST00000462613 POLR3DP05423 398 aaPredicted RBP7.65□□□□□ -1.18
SF3B1-206ENST00000462613 HSPA6P17066 643 aa7.65□□□□□ -1.18
SF3B1-206ENST00000462613 PDE4AP27815 886 aa7.65□□□□□ -1.18
SF3B1-206ENST00000462613 DOCK1Q14185 1865 aa7.65□□□□□ -1.18
SF3B1-206ENST00000462613 PAXIP1Q6ZW49 1069 aaPredicted RBP7.65□□□□□ -1.18
SF3B1-206ENST00000462613 TTC6Q86TZ1 520 aa7.65□□□□□ -1.18
SF3B1-206ENST00000462613 SH3RF3Q8TEJ3 882 aaPredicted RBP7.65□□□□□ -1.18
SF3B1-206ENST00000462613 PASKQ96RG2 1323 aa7.65□□□□□ -1.18
SF3B1-206ENST00000462613 CSRNP1Q96S65 589 aa7.65□□□□□ -1.18
SF3B1-206ENST00000462613 TMEM39BQ9GZU3 492 aa7.65□□□□□ -1.18
SF3B1-206ENST00000462613 OSBPL5Q9H0X9 879 aaPredicted RBP7.65□□□□□ -1.18
SF3B1-206ENST00000462613 OTOFQ9HC10 1997 aa7.65□□□□□ -1.18
SF3B1-206ENST00000462613 HELLSQ9NRZ9 838 aa7.65□□□□□ -1.18
SF3B1-206ENST00000462613 CREBZFQ9NS37 354 aa7.65□□□□□ -1.18
SF3B1-206ENST00000462613 ATP8A2Q9NTI2 1148 aa7.65□□□□□ -1.18
SF3B1-206ENST00000462613 SLC4A4Q9Y6R1 1079 aa7.65□□□□□ -1.18
SF3B1-206ENST00000462613 FLT1P17948 1338 aa7.64□□□□□ -1.19
SF3B1-206ENST00000462613 TCRBV5S4A2TA0A5A2 114 aa7.64□□□□□ -1.19
SF3B1-206ENST00000462613 UNCXA6NJT0 531 aa7.64□□□□□ -1.19
SF3B1-206ENST00000462613 GPAA1O43292 621 aa7.64□□□□□ -1.19
SF3B1-206ENST00000462613 WDHD1O75717 1129 aaPredicted RBP7.64□□□□□ -1.19
SF3B1-206ENST00000462613 SLC3A2P08195 630 aaKnown RBP7.64□□□□□ -1.19
SF3B1-206ENST00000462613 SDSP20132 328 aa7.64□□□□□ -1.19
SF3B1-206ENST00000462613 ECE1P42892 770 aa7.64□□□□□ -1.19
SF3B1-206ENST00000462613 TDO2P48775 406 aa7.64□□□□□ -1.19
SF3B1-206ENST00000462613 RHBDL3P58872 404 aa7.64□□□□□ -1.19
SF3B1-206ENST00000462613 DYNLL1P63167 89 aaKnown RBP7.64□□□□□ -1.19
SF3B1-206ENST00000462613 NFIAQ12857 509 aa7.64□□□□□ -1.19
SF3B1-206ENST00000462613 MCMDC2Q4G0Z9 681 aa7.64□□□□□ -1.19
SF3B1-206ENST00000462613 BMP2KLQ5H9B9 411 aa7.64□□□□□ -1.19
SF3B1-206ENST00000462613 ZMYM1Q5SVZ6 1142 aa7.64□□□□□ -1.19
SF3B1-206ENST00000462613 ADGRA1Q86SQ6 560 aa7.64□□□□□ -1.19
SF3B1-206ENST00000462613 MAPKAPK5Q8IW41 473 aa7.64□□□□□ -1.19
SF3B1-206ENST00000462613 ZNF384Q8TF68 577 aa7.64□□□□□ -1.19
SF3B1-206ENST00000462613 RIOK1Q9BRS2 568 aaKnown RBP7.64□□□□□ -1.19
SF3B1-206ENST00000462613 ZNF341Q9BYN7 854 aa7.64□□□□□ -1.19
SF3B1-206ENST00000462613 ARMT1Q9H993 441 aa7.64□□□□□ -1.19
SF3B1-206ENST00000462613 ZNF287Q9HBT7 754 aa7.64□□□□□ -1.19
SF3B1-206ENST00000462613 PI4KBQ9UBF8 816 aa7.64□□□□□ -1.19
SF3B1-206ENST00000462613 FAM198AQ9UFP1 575 aa7.64□□□□□ -1.19
SF3B1-206ENST00000462613 HERC5Q9UII4 1024 aaKnown RBP7.64□□□□□ -1.19
SF3B1-206ENST00000462613 TAOK2Q9UL54 1235 aa7.64□□□□□ -1.19
SF3B1-206ENST00000462613 ANGEL1Q9UNK9 670 aaKnown RBP7.64□□□□□ -1.19
SF3B1-206ENST00000462613 SCAF8Q9UPN6 1271 aaKnown RBP7.64□□□□□ -1.19
SF3B1-206ENST00000462613 CSADQ9Y600 493 aa7.64□□□□□ -1.19
SF3B1-206ENST00000462613 LAMA4Q16363 1823 aa7.64□□□□□ -1.19
SF3B1-206ENST00000462613 DDX60LQ5H9U9 1706 aaKnown RBP7.64□□□□□ -1.19
SF3B1-206ENST00000462613 CNTNAP1P78357 1384 aa7.63□□□□□ -1.19
SF3B1-206ENST00000462613 ATRNL1Q5VV63 1379 aa7.63□□□□□ -1.19
SF3B1-206ENST00000462613 RAD50Q92878 1312 aa7.63□□□□□ -1.19
SF3B1-206ENST00000462613 EIF5BO60841 1220 aaKnown RBP7.63□□□□□ -1.19
SF3B1-206ENST00000462613 HUNKP57058 714 aa7.63□□□□□ -1.19
SF3B1-206ENST00000462613 PRKG1Q13976 671 aa7.63□□□□□ -1.19
SF3B1-206ENST00000462613 NBPF12Q5TAG4 269 aaPredicted RBP7.63□□□□□ -1.19
SF3B1-206ENST00000462613 PRAMEF18Q5VWM3 479 aa7.63□□□□□ -1.19
SF3B1-206ENST00000462613 GIMAP6Q6P9H5 292 aa7.63□□□□□ -1.19
SF3B1-206ENST00000462613 CWC27Q6UX04 472 aaKnown RBP7.63□□□□□ -1.19
SF3B1-206ENST00000462613 KIAA1211Q6ZU35 1233 aa7.63□□□□□ -1.19
SF3B1-206ENST00000462613 FOXP4Q8IVH2 680 aaPredicted RBP7.63□□□□□ -1.19
SF3B1-206ENST00000462613 ANKRD13AQ8IZ07 590 aa7.63□□□□□ -1.19
SF3B1-206ENST00000462613 LCORLQ8N3X6 602 aa7.63□□□□□ -1.19
SF3B1-206ENST00000462613 HHIPL1Q96JK4 782 aa7.63□□□□□ -1.19
SF3B1-206ENST00000462613 PUS7LQ9H0K6 701 aaKnown RBP7.63□□□□□ -1.19
SF3B1-206ENST00000462613 NAPBQ9H115 298 aa7.63□□□□□ -1.19
SF3B1-206ENST00000462613 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.63□□□□□ -1.19
SF3B1-206ENST00000462613 MCM9Q9NXL9 1143 aa7.63□□□□□ -1.19
SF3B1-206ENST00000462613 ARPP21Q9UBL0 812 aaPredicted RBP7.63□□□□□ -1.19
SF3B1-206ENST00000462613 MYH4Q9Y623 1939 aa7.62□□□□□ -1.19
SF3B1-206ENST00000462613 SIPA1L1O43166 1804 aa7.62□□□□□ -1.19
SF3B1-206ENST00000462613 CCDC171Q6TFL3 1326 aa7.62□□□□□ -1.19
SF3B1-206ENST00000462613 PATL2C9JE40 543 aaKnown RBP7.62□□□□□ -1.19
SF3B1-206ENST00000462613 GSPT1P15170 499 aaKnown RBP7.62□□□□□ -1.19
SF3B1-206ENST00000462613 NMIQ13287 307 aaPredicted RBP7.62□□□□□ -1.19
SF3B1-206ENST00000462613 DEFB115Q30KQ5 88 aa7.62□□□□□ -1.19
SF3B1-206ENST00000462613 SDR42E1Q8WUS8 393 aa7.62□□□□□ -1.19
SF3B1-206ENST00000462613 OSBP2Q969R2 916 aa7.62□□□□□ -1.19
SF3B1-206ENST00000462613 CCDC102AQ96A19 550 aa7.62□□□□□ -1.19
SF3B1-206ENST00000462613 TEPSINQ96N21 525 aa7.62□□□□□ -1.19
SF3B1-206ENST00000462613 WRNIP1Q96S55 665 aa7.62□□□□□ -1.19
SF3B1-206ENST00000462613 STRBPQ96SI9 672 aaKnown RBP7.62□□□□□ -1.19
SF3B1-206ENST00000462613 DCP1AQ9NPI6 582 aaPredicted RBP7.62□□□□□ -1.19
SF3B1-206ENST00000462613 DDX4Q9NQI0 724 aaKnown RBP7.62□□□□□ -1.19
SF3B1-206ENST00000462613 SAP30BPQ9UHR5 308 aaKnown RBP7.62□□□□□ -1.19
SF3B1-206ENST00000462613 SERPINB13Q9UIV8 391 aa7.62□□□□□ -1.19
SF3B1-206ENST00000462613 TLL2Q9Y6L7 1015 aa7.62□□□□□ -1.19
SF3B1-206ENST00000462613 A0A0D9SFI3 127 aa7.61□□□□□ -1.19
SF3B1-206ENST00000462613 DDTLA6NHG4 134 aaPredicted RBP7.61□□□□□ -1.19
SF3B1-206ENST00000462613 M0R2C6 588 aa7.61□□□□□ -1.19
SF3B1-206ENST00000462613 TBC1D12O60347 775 aa7.61□□□□□ -1.19
SF3B1-206ENST00000462613 CDC45O75419 566 aa7.61□□□□□ -1.19
SF3B1-206ENST00000462613 ZNF157P51786 506 aaPredicted RBP7.61□□□□□ -1.19
SF3B1-206ENST00000462613 MAP3K9P80192 1104 aa7.61□□□□□ -1.19
SF3B1-206ENST00000462613 PDE4BQ07343 736 aa7.61□□□□□ -1.19
SF3B1-206ENST00000462613 MAP3K11Q16584 847 aa7.61□□□□□ -1.19
SF3B1-206ENST00000462613 CST9Q5W186 159 aa7.61□□□□□ -1.19
SF3B1-206ENST00000462613 RGMBQ6NW40 437 aa7.61□□□□□ -1.19
SF3B1-206ENST00000462613 MIGA2Q7L4E1 593 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms