RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 IRX2Q9BZI1 471 aaPredicted RBP13.49□□□□□ -0.25
PDZRN3-203ENST00000462146 C19orf44Q9H6X5 657 aa13.49□□□□□ -0.25
PDZRN3-203ENST00000462146 TMEM51Q9NW97 253 aa13.49□□□□□ -0.25
PDZRN3-203ENST00000462146 ARGLU1Q9NWB6 273 aaPredicted RBP13.49□□□□□ -0.25
PDZRN3-203ENST00000462146 UBN2Q6ZU65 1347 aa13.49□□□□□ -0.25
PDZRN3-203ENST00000462146 UBR2Q8IWV8 1755 aa13.48□□□□□ -0.25
PDZRN3-203ENST00000462146 A0A0U1RQJ8 604 aa13.48□□□□□ -0.25
PDZRN3-203ENST00000462146 ARHGAP6O43182 974 aa13.48□□□□□ -0.25
PDZRN3-203ENST00000462146 TUBB4AP04350 444 aa13.48□□□□□ -0.25
PDZRN3-203ENST00000462146 APPP05067 770 aa13.48□□□□□ -0.25
PDZRN3-203ENST00000462146 NTRK3Q16288 839 aa13.48□□□□□ -0.25
PDZRN3-203ENST00000462146 TC2NQ8N9U0 490 aa13.48□□□□□ -0.25
PDZRN3-203ENST00000462146 ATRIPQ8WXE1 791 aa13.48□□□□□ -0.25
PDZRN3-203ENST00000462146 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.48□□□□□ -0.25
PDZRN3-203ENST00000462146 SEC31BQ9NQW1 1179 aa13.48□□□□□ -0.25
PDZRN3-203ENST00000462146 FAM217BQ9NTX9 383 aaPredicted RBP13.48□□□□□ -0.25
PDZRN3-203ENST00000462146 GUCY1A2P33402 732 aa13.48□□□□□ -0.25
PDZRN3-203ENST00000462146 HNRNPH2P55795 449 aaKnown RBP13.48□□□□□ -0.25
PDZRN3-203ENST00000462146 TBX2Q13207 712 aaPredicted RBP13.48□□□□□ -0.25
PDZRN3-203ENST00000462146 CCDC102BQ68D86 513 aa13.48□□□□□ -0.25
PDZRN3-203ENST00000462146 MED15Q96RN5 788 aa13.48□□□□□ -0.25
PDZRN3-203ENST00000462146 MAN1B1Q9UKM7 699 aa13.48□□□□□ -0.25
PDZRN3-203ENST00000462146 C1orf167Q5SNV9 1468 aa13.48□□□□□ -0.25
PDZRN3-203ENST00000462146 FAM237AA0A1B0GTK4 181 aa13.47□□□□□ -0.25
PDZRN3-203ENST00000462146 ZSCAN12O43309 604 aa13.47□□□□□ -0.25
PDZRN3-203ENST00000462146 CASQ1P31415 396 aa13.47□□□□□ -0.25
PDZRN3-203ENST00000462146 MDM2Q00987 491 aaPredicted RBP13.47□□□□□ -0.25
PDZRN3-203ENST00000462146 TRDNQ13061 729 aa13.47□□□□□ -0.25
PDZRN3-203ENST00000462146 CC2D1AQ6P1N0 951 aaPredicted RBP13.47□□□□□ -0.25
PDZRN3-203ENST00000462146 TICAM2Q86XR7 235 aa13.47□□□□□ -0.25
PDZRN3-203ENST00000462146 KIFC2Q96AC6 838 aa13.47□□□□□ -0.25
PDZRN3-203ENST00000462146 RIC1Q4ADV7 1423 aa13.47□□□□□ -0.25
PDZRN3-203ENST00000462146 GYS2P54840 703 aa13.47□□□□□ -0.25
PDZRN3-203ENST00000462146 PPP2R3AQ06190 1150 aa13.47□□□□□ -0.25
PDZRN3-203ENST00000462146 DHX8Q14562 1220 aaKnown RBP13.47□□□□□ -0.25
PDZRN3-203ENST00000462146 SLC9C2Q5TAH2 1124 aa13.47□□□□□ -0.25
PDZRN3-203ENST00000462146 JMYQ8N9B5 988 aa13.47□□□□□ -0.25
PDZRN3-203ENST00000462146 DHX58Q96C10 678 aa13.47□□□□□ -0.25
PDZRN3-203ENST00000462146 SLC26A6Q9BXS9 759 aa13.47□□□□□ -0.25
PDZRN3-203ENST00000462146 ZSWIM4Q9H7M6 989 aa13.47□□□□□ -0.25
PDZRN3-203ENST00000462146 NFE2L3Q9Y4A8 694 aa13.47□□□□□ -0.25
PDZRN3-203ENST00000462146 MYH8P13535 1937 aa13.47□□□□□ -0.25
PDZRN3-203ENST00000462146 CUTAO60888 179 aa13.46□□□□□ -0.25
PDZRN3-203ENST00000462146 OAS2P29728 719 aaKnown RBP13.46□□□□□ -0.25
PDZRN3-203ENST00000462146 MAP3K9P80192 1104 aa13.46□□□□□ -0.25
PDZRN3-203ENST00000462146 TAF7LQ5H9L4 462 aa13.46□□□□□ -0.25
PDZRN3-203ENST00000462146 NFXL1Q6ZNB6 911 aa13.46□□□□□ -0.25
PDZRN3-203ENST00000462146 SMARCE1Q969G3 411 aa13.46□□□□□ -0.25
PDZRN3-203ENST00000462146 MRPL44Q9H9J2 332 aaKnown RBP13.46□□□□□ -0.25
PDZRN3-203ENST00000462146 PIH1D3Q9NQM4 214 aaKnown RBP13.46□□□□□ -0.25
PDZRN3-203ENST00000462146 SAMSN1Q9NSI8 373 aaKnown RBP13.46□□□□□ -0.25
PDZRN3-203ENST00000462146 ATG3Q9NT62 314 aa13.46□□□□□ -0.25
PDZRN3-203ENST00000462146 KCNJ14Q9UNX9 436 aa13.46□□□□□ -0.25
PDZRN3-203ENST00000462146 MRFAP1Q9Y605 127 aa13.46□□□□□ -0.25
PDZRN3-203ENST00000462146 TACC3Q9Y6A5 838 aa13.46□□□□□ -0.25
PDZRN3-203ENST00000462146 KCPQ6ZWJ8 1503 aa13.46□□□□□ -0.25
PDZRN3-203ENST00000462146 GOLGA8AA7E2F4 631 aa13.46□□□□□ -0.25
PDZRN3-203ENST00000462146 BTBD18B2RXH4 712 aa13.46□□□□□ -0.25
PDZRN3-203ENST00000462146 ADD2P35612 726 aa13.46□□□□□ -0.25
PDZRN3-203ENST00000462146 IARSP41252 1262 aaKnown RBP13.46□□□□□ -0.25
PDZRN3-203ENST00000462146 TOB1P50616 345 aaPredicted RBP13.46□□□□□ -0.25
PDZRN3-203ENST00000462146 CMTR1Q8N1G2 835 aaKnown RBP13.46□□□□□ -0.25
PDZRN3-203ENST00000462146 SRRTQ9BXP5 876 aaKnown RBP13.46□□□□□ -0.25
PDZRN3-203ENST00000462146 LY9Q9HBG7 655 aa13.46□□□□□ -0.25
PDZRN3-203ENST00000462146 SERTAD1Q9UHV2 236 aa13.46□□□□□ -0.25
PDZRN3-203ENST00000462146 AKAP2Q9Y2D5 859 aa13.46□□□□□ -0.25
PDZRN3-203ENST00000462146 ZBTB43O43298 467 aa13.46□□□□□ -0.26
PDZRN3-203ENST00000462146 IDH1O75874 414 aaKnown RBP13.46□□□□□ -0.26
PDZRN3-203ENST00000462146 FCHSD1Q86WN1 690 aa13.46□□□□□ -0.26
PDZRN3-203ENST00000462146 CCDC82Q8N4S0 544 aa13.46□□□□□ -0.26
PDZRN3-203ENST00000462146 IGDCC4Q8TDY8 1250 aa13.46□□□□□ -0.26
PDZRN3-203ENST00000462146 TEX13AQ9BXU3 409 aaPredicted RBP13.46□□□□□ -0.26
PDZRN3-203ENST00000462146 WDR19Q8NEZ3 1342 aa13.46□□□□□ -0.26
PDZRN3-203ENST00000462146 PARP4Q9UKK3 1724 aaKnown RBP13.45□□□□□ -0.26
PDZRN3-203ENST00000462146 POLR2DO15514 142 aaKnown RBP13.45□□□□□ -0.26
PDZRN3-203ENST00000462146 CDK11BP21127 795 aaKnown RBP13.45□□□□□ -0.26
PDZRN3-203ENST00000462146 MPHOSPH8Q99549 860 aa13.45□□□□□ -0.26
PDZRN3-203ENST00000462146 PARD6BQ9BYG5 372 aa13.45□□□□□ -0.26
PDZRN3-203ENST00000462146 UBXN6Q9BZV1 441 aa13.45□□□□□ -0.26
PDZRN3-203ENST00000462146 WWC3Q9ULE0 1092 aa13.45□□□□□ -0.26
PDZRN3-203ENST00000462146 ZNF532Q9HCE3 1301 aa13.45□□□□□ -0.26
PDZRN3-203ENST00000462146 SOWAHDA6NJG2 315 aa13.45□□□□□ -0.26
PDZRN3-203ENST00000462146 ZNF18P17022 549 aa13.45□□□□□ -0.26
PDZRN3-203ENST00000462146 CAPN2P17655 700 aa13.45□□□□□ -0.26
PDZRN3-203ENST00000462146 GTF2E1P29083 439 aaPredicted RBP13.45□□□□□ -0.26
PDZRN3-203ENST00000462146 CTDSPL2Q05D32 466 aa13.45□□□□□ -0.26
PDZRN3-203ENST00000462146 POSTNQ15063 836 aa13.45□□□□□ -0.26
PDZRN3-203ENST00000462146 USP49Q70CQ1 688 aa13.45□□□□□ -0.26
PDZRN3-203ENST00000462146 RSRC2Q7L4I2 434 aaKnown RBP13.45□□□□□ -0.26
PDZRN3-203ENST00000462146 KRI1Q8N9T8 703 aaKnown RBP13.45□□□□□ -0.26
PDZRN3-203ENST00000462146 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.45□□□□□ -0.26
PDZRN3-203ENST00000462146 CALCOCO1Q9P1Z2 691 aa13.45□□□□□ -0.26
PDZRN3-203ENST00000462146 CDKL5O76039 1030 aa13.44□□□□□ -0.26
PDZRN3-203ENST00000462146 ATP2B1P20020 1258 aa13.44□□□□□ -0.26
PDZRN3-203ENST00000462146 TRIM29Q14134 588 aa13.44□□□□□ -0.26
PDZRN3-203ENST00000462146 TMEM67Q5HYA8 995 aa13.44□□□□□ -0.26
PDZRN3-203ENST00000462146 METTL24Q5JXM2 366 aa13.44□□□□□ -0.26
PDZRN3-203ENST00000462146 SPECC1LQ69YQ0 1117 aa13.44□□□□□ -0.26
PDZRN3-203ENST00000462146 BBXQ8WY36 941 aaPredicted RBP13.44□□□□□ -0.26
PDZRN3-203ENST00000462146 ISCA1Q9BUE6 129 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms