RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 OPTNQ96CV9 577 aa27.43■■□□□ 1.98
TRAF4-207ENST00000461195 DDX4Q9NQI0 724 aaKnown RBP27.43■■□□□ 1.98
TRAF4-207ENST00000461195 NDUFB9Q9Y6M9 179 aa27.43■■□□□ 1.98
TRAF4-207ENST00000461195 NPM3O75607 178 aaKnown RBP27.42■■□□□ 1.98
TRAF4-207ENST00000461195 BAG3O95817 575 aa27.42■■□□□ 1.98
TRAF4-207ENST00000461195 GJA5P36382 358 aa27.42■■□□□ 1.98
TRAF4-207ENST00000461195 INHBEP58166 350 aa27.42■■□□□ 1.98
TRAF4-207ENST00000461195 ZSCAN29Q8IWY8 852 aaPredicted RBP27.42■■□□□ 1.98
TRAF4-207ENST00000461195 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.42■■□□□ 1.98
TRAF4-207ENST00000461195 DCTPP1Q9H773 170 aa27.42■■□□□ 1.98
TRAF4-207ENST00000461195 IDH1O75874 414 aaKnown RBP27.41■■□□□ 1.98
TRAF4-207ENST00000461195 MLLT1Q03111 559 aaPredicted RBP27.41■■□□□ 1.98
TRAF4-207ENST00000461195 CRBNQ96SW2 442 aa27.41■■□□□ 1.98
TRAF4-207ENST00000461195 PCDHB15Q9Y5E8 787 aa27.41■■□□□ 1.98
TRAF4-207ENST00000461195 PLCG2P16885 1265 aa27.4■■□□□ 1.98
TRAF4-207ENST00000461195 TEX11Q8IYF3 940 aa27.4■■□□□ 1.98
TRAF4-207ENST00000461195 ZKSCAN4Q969J2 545 aaPredicted RBP27.4■■□□□ 1.98
TRAF4-207ENST00000461195 ANTXR1Q9H6X2 564 aa27.4■■□□□ 1.98
TRAF4-207ENST00000461195 AATFQ9NY61 560 aaKnown RBP eCLIP27.4■■□□□ 1.98
TRAF4-207ENST00000461195 PPP4CP60510 307 aa27.39■■□□□ 1.98
TRAF4-207ENST00000461195 MAP3K12Q12852 859 aa27.39■■□□□ 1.98
TRAF4-207ENST00000461195 DGKZQ13574 1117 aa27.39■■□□□ 1.98
TRAF4-207ENST00000461195 TTF1Q15361 905 aaPredicted RBP27.39■■□□□ 1.98
TRAF4-207ENST00000461195 SH3BP5LQ7L8J4 393 aa27.39■■□□□ 1.98
TRAF4-207ENST00000461195 ADGRA1Q86SQ6 560 aa27.39■■□□□ 1.98
TRAF4-207ENST00000461195 ZNF112Q9UJU3 913 aa27.39■■□□□ 1.98
TRAF4-207ENST00000461195 SNCAIPQ9Y6H5 919 aa27.39■■□□□ 1.98
TRAF4-207ENST00000461195 ATRNL1Q5VV63 1379 aa27.38■■□□□ 1.97
TRAF4-207ENST00000461195 DDTLA6NHG4 134 aaPredicted RBP27.38■■□□□ 1.97
TRAF4-207ENST00000461195 SMARCA5O60264 1052 aaPredicted RBP27.38■■□□□ 1.97
TRAF4-207ENST00000461195 CYP7A1P22680 504 aa27.38■■□□□ 1.97
TRAF4-207ENST00000461195 RGS19P49795 217 aa27.38■■□□□ 1.97
TRAF4-207ENST00000461195 TMED8Q6PL24 325 aaPredicted RBP27.38■■□□□ 1.97
TRAF4-207ENST00000461195 SH3RF3Q8TEJ3 882 aaPredicted RBP27.38■■□□□ 1.97
TRAF4-207ENST00000461195 CNKSR2Q8WXI2 1034 aa27.38■■□□□ 1.97
TRAF4-207ENST00000461195 SPDYE5A6NIY4 337 aa27.37■■□□□ 1.97
TRAF4-207ENST00000461195 INPP5BP32019 993 aa27.37■■□□□ 1.97
TRAF4-207ENST00000461195 ERO1BQ86YB8 467 aa27.37■■□□□ 1.97
TRAF4-207ENST00000461195 OTUD5Q96G74 571 aa27.37■■□□□ 1.97
TRAF4-207ENST00000461195 ALDH1A1P00352 501 aa27.36■■□□□ 1.97
TRAF4-207ENST00000461195 IFNL1Q8IU54 200 aa27.36■■□□□ 1.97
TRAF4-207ENST00000461195 MAGEB6Q8N7X4 407 aa27.36■■□□□ 1.97
TRAF4-207ENST00000461195 DNAJC2Q99543 621 aaKnown RBP27.36■■□□□ 1.97
TRAF4-207ENST00000461195 OSBPL5Q9H0X9 879 aaPredicted RBP27.36■■□□□ 1.97
TRAF4-207ENST00000461195 COL2A1P02458 1487 aaPredicted RBP27.36■■□□□ 1.97
TRAF4-207ENST00000461195 CDK5RAP2Q96SN8 1893 aa27.36■■□□□ 1.97
TRAF4-207ENST00000461195 ATP5JP18859 108 aa27.35■■□□□ 1.97
TRAF4-207ENST00000461195 FOCADQ5VW36 1801 aa27.34■■□□□ 1.97
TRAF4-207ENST00000461195 GOLIM4O00461 696 aa27.34■■□□□ 1.97
TRAF4-207ENST00000461195 TBC1D8O95759 1140 aa27.34■■□□□ 1.97
TRAF4-207ENST00000461195 MAP3K10Q02779 954 aa27.34■■□□□ 1.97
TRAF4-207ENST00000461195 TESPA1A2RU30 521 aaPredicted RBP27.33■■□□□ 1.97
TRAF4-207ENST00000461195 GTF2A2P52657 109 aa27.33■■□□□ 1.97
TRAF4-207ENST00000461195 NOL9Q5SY16 702 aaKnown RBP27.33■■□□□ 1.97
TRAF4-207ENST00000461195 OTUD7BQ6GQQ9 843 aa27.33■■□□□ 1.97
TRAF4-207ENST00000461195 CERS3Q8IU89 383 aa27.33■■□□□ 1.97
TRAF4-207ENST00000461195 MS4A4AQ96JQ5 239 aa27.33■■□□□ 1.97
TRAF4-207ENST00000461195 CFHR5Q9BXR6 569 aa27.33■■□□□ 1.97
TRAF4-207ENST00000461195 BOLA2Q9H3K6 86 aa27.33■■□□□ 1.97
TRAF4-207ENST00000461195 PHF20L1A8MW92 1017 aa27.32■■□□□ 1.96
TRAF4-207ENST00000461195 IGF2BP3O00425 579 aaKnown RBP eCLIP27.32■■□□□ 1.96
TRAF4-207ENST00000461195 PPIL2Q13356 520 aa27.32■■□□□ 1.96
TRAF4-207ENST00000461195 TGFBRAP1Q8WUH2 860 aa27.32■■□□□ 1.96
TRAF4-207ENST00000461195 DYNLL1P63167 89 aaKnown RBP27.31■■□□□ 1.96
TRAF4-207ENST00000461195 PPATQ06203 517 aa27.31■■□□□ 1.96
TRAF4-207ENST00000461195 MIGA1Q8NAN2 632 aa27.31■■□□□ 1.96
TRAF4-207ENST00000461195 HAUS7Q99871 368 aa27.31■■□□□ 1.96
TRAF4-207ENST00000461195 PAG1Q9NWQ8 432 aa27.31■■□□□ 1.96
TRAF4-207ENST00000461195 TBC1D12O60347 775 aa27.3■■□□□ 1.96
TRAF4-207ENST00000461195 AAMPQ13685 434 aa27.3■■□□□ 1.96
TRAF4-207ENST00000461195 SLC9C2Q5TAH2 1124 aa27.3■■□□□ 1.96
TRAF4-207ENST00000461195 MAPKAPK5Q8IW41 473 aa27.3■■□□□ 1.96
TRAF4-207ENST00000461195 PTPN18Q99952 460 aa27.3■■□□□ 1.96
TRAF4-207ENST00000461195 CCL15-CCL14A0A0B4J2E2 113 aa27.29■■□□□ 1.96
TRAF4-207ENST00000461195 IRF6O14896 467 aa27.29■■□□□ 1.96
TRAF4-207ENST00000461195 PDE6AP16499 860 aa27.29■■□□□ 1.96
TRAF4-207ENST00000461195 CCL15Q16663 113 aa27.29■■□□□ 1.96
TRAF4-207ENST00000461195 BRI3BPQ8WY22 251 aa27.29■■□□□ 1.96
TRAF4-207ENST00000461195 EDC3Q96F86 508 aaKnown RBP27.29■■□□□ 1.96
TRAF4-207ENST00000461195 DHX36Q9H2U1 1008 aaKnown RBP27.29■■□□□ 1.96
TRAF4-207ENST00000461195 ECHDC1Q9NTX5 307 aa27.29■■□□□ 1.96
TRAF4-207ENST00000461195 FLT1P17948 1338 aa27.29■■□□□ 1.96
TRAF4-207ENST00000461195 SLURP2P0DP57 97 aa27.28■■□□□ 1.96
TRAF4-207ENST00000461195 SNAPC2Q13487 334 aa27.28■■□□□ 1.96
TRAF4-207ENST00000461195 NOM1Q5C9Z4 860 aaKnown RBP27.28■■□□□ 1.96
TRAF4-207ENST00000461195 SCYL3Q8IZE3 742 aa27.28■■□□□ 1.96
TRAF4-207ENST00000461195 GPATCH3Q96I76 525 aa27.28■■□□□ 1.96
TRAF4-207ENST00000461195 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.28■■□□□ 1.96
TRAF4-207ENST00000461195 DOCK1Q14185 1865 aa27.27■■□□□ 1.96
TRAF4-207ENST00000461195 CETPP11597 493 aa27.27■■□□□ 1.96
TRAF4-207ENST00000461195 PICK1Q9NRD5 415 aa27.27■■□□□ 1.96
TRAF4-207ENST00000461195 PI4KBQ9UBF8 816 aa27.27■■□□□ 1.96
TRAF4-207ENST00000461195 GPR25O00155 361 aa27.26■■□□□ 1.95
TRAF4-207ENST00000461195 CTNND1O60716 968 aaKnown RBP27.26■■□□□ 1.95
TRAF4-207ENST00000461195 R3HDMLQ9H3Y0 253 aa27.26■■□□□ 1.95
TRAF4-207ENST00000461195 HERC5Q9UII4 1024 aaKnown RBP27.26■■□□□ 1.95
TRAF4-207ENST00000461195 ZNF532Q9HCE3 1301 aa27.25■■□□□ 1.95
TRAF4-207ENST00000461195 MAGEB6P1A0A0J9YX57 407 aa27.25■■□□□ 1.95
TRAF4-207ENST00000461195 FAM196BA6NMK8 535 aa27.25■■□□□ 1.95
TRAF4-207ENST00000461195 SLC34A2O95436 690 aa27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms