RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 RGS3P49796 1198 aa12.28□□□□□ -0.44
HDLBP-228ENST00000459788 NFIAQ12857 509 aa12.28□□□□□ -0.44
HDLBP-228ENST00000459788 CCL15Q16663 113 aa12.28□□□□□ -0.44
HDLBP-228ENST00000459788 CEP85Q6P2H3 762 aa12.28□□□□□ -0.44
HDLBP-228ENST00000459788 BRI3BPQ8WY22 251 aa12.28□□□□□ -0.44
HDLBP-228ENST00000459788 PTPN18Q99952 460 aa12.28□□□□□ -0.44
HDLBP-228ENST00000459788 ZFYVE28Q9HCC9 887 aa12.28□□□□□ -0.44
HDLBP-228ENST00000459788 KCNH4Q9UQ05 1017 aa12.28□□□□□ -0.44
HDLBP-228ENST00000459788 HMMRO75330 724 aa12.27□□□□□ -0.45
HDLBP-228ENST00000459788 BAG3O95817 575 aa12.27□□□□□ -0.45
HDLBP-228ENST00000459788 BTDP43251 543 aa12.27□□□□□ -0.45
HDLBP-228ENST00000459788 RHBDL3P58872 404 aa12.27□□□□□ -0.45
HDLBP-228ENST00000459788 PPP4CP60510 307 aa12.27□□□□□ -0.45
HDLBP-228ENST00000459788 CRHR2Q13324 411 aa12.27□□□□□ -0.45
HDLBP-228ENST00000459788 TTC39AQ5SRH9 613 aa12.27□□□□□ -0.45
HDLBP-228ENST00000459788 OTUD5Q96G74 571 aa12.27□□□□□ -0.45
HDLBP-228ENST00000459788 TBC1D2Q9BYX2 928 aa12.27□□□□□ -0.45
HDLBP-228ENST00000459788 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.27□□□□□ -0.45
HDLBP-228ENST00000459788 MYH1P12882 1939 aa12.27□□□□□ -0.45
HDLBP-228ENST00000459788 KIAA0100Q14667 2235 aaKnown RBP12.26□□□□□ -0.45
HDLBP-228ENST00000459788 CXCL11O14625 94 aa12.26□□□□□ -0.45
HDLBP-228ENST00000459788 IRF6O14896 467 aa12.26□□□□□ -0.45
HDLBP-228ENST00000459788 CTNND1O60716 968 aaKnown RBP12.26□□□□□ -0.45
HDLBP-228ENST00000459788 GNRH1P01148 92 aa12.26□□□□□ -0.45
HDLBP-228ENST00000459788 SP3Q02447 781 aa12.26□□□□□ -0.45
HDLBP-228ENST00000459788 TCP10Q12799 353 aa12.26□□□□□ -0.45
HDLBP-228ENST00000459788 PDE3AQ14432 1141 aa12.26□□□□□ -0.45
HDLBP-228ENST00000459788 ANKRD23Q86SG2 305 aa12.26□□□□□ -0.45
HDLBP-228ENST00000459788 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.26□□□□□ -0.45
HDLBP-228ENST00000459788 ZNF384Q8TF68 577 aa12.26□□□□□ -0.45
HDLBP-228ENST00000459788 ZKSCAN4Q969J2 545 aaPredicted RBP12.26□□□□□ -0.45
HDLBP-228ENST00000459788 NOL10Q9BSC4 688 aaKnown RBP12.26□□□□□ -0.45
HDLBP-228ENST00000459788 R3HDMLQ9H3Y0 253 aa12.26□□□□□ -0.45
HDLBP-228ENST00000459788 RAI14Q9P0K7 980 aa12.26□□□□□ -0.45
HDLBP-228ENST00000459788 LRP2BPQ9P2M1 347 aa12.26□□□□□ -0.45
HDLBP-228ENST00000459788 HPS5Q9UPZ3 1129 aa12.26□□□□□ -0.45
HDLBP-228ENST00000459788 MGAMO43451 1857 aa12.25□□□□□ -0.45
HDLBP-228ENST00000459788 PHF20L1A8MW92 1017 aa12.25□□□□□ -0.45
HDLBP-228ENST00000459788 INPP5BP32019 993 aa12.25□□□□□ -0.45
HDLBP-228ENST00000459788 MLLT1Q03111 559 aaPredicted RBP12.25□□□□□ -0.45
HDLBP-228ENST00000459788 TAF1CQ15572 869 aaPredicted RBP12.25□□□□□ -0.45
HDLBP-228ENST00000459788 MIGA2Q7L4E1 593 aa12.25□□□□□ -0.45
HDLBP-228ENST00000459788 SCYL3Q8IZE3 742 aa12.25□□□□□ -0.45
HDLBP-228ENST00000459788 PANK1Q8TE04 598 aa12.25□□□□□ -0.45
HDLBP-228ENST00000459788 DBNDD2Q9BQY9 259 aa12.25□□□□□ -0.45
HDLBP-228ENST00000459788 DHX36Q9H2U1 1008 aaKnown RBP12.25□□□□□ -0.45
HDLBP-228ENST00000459788 C1orf115Q9H7X2 142 aa12.25□□□□□ -0.45
HDLBP-228ENST00000459788 ZBTB40Q9NUA8 1239 aa12.25□□□□□ -0.45
HDLBP-228ENST00000459788 RCAN3Q9UKA8 241 aa12.25□□□□□ -0.45
HDLBP-228ENST00000459788 MYH7P12883 1935 aa12.25□□□□□ -0.45
HDLBP-228ENST00000459788 TLR2O60603 784 aa12.24□□□□□ -0.45
HDLBP-228ENST00000459788 PRMT2P55345 433 aa12.24□□□□□ -0.45
HDLBP-228ENST00000459788 NAA16Q6N069 864 aaPredicted RBP12.24□□□□□ -0.45
HDLBP-228ENST00000459788 OTOP1Q7RTM1 612 aa12.24□□□□□ -0.45
HDLBP-228ENST00000459788 ZSCAN29Q8IWY8 852 aaPredicted RBP12.24□□□□□ -0.45
HDLBP-228ENST00000459788 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.24□□□□□ -0.45
HDLBP-228ENST00000459788 CNKSR2Q8WXI2 1034 aa12.24□□□□□ -0.45
HDLBP-228ENST00000459788 EAF2Q96CJ1 260 aaPredicted RBP12.24□□□□□ -0.45
HDLBP-228ENST00000459788 OSBPL5Q9H0X9 879 aaPredicted RBP12.24□□□□□ -0.45
HDLBP-228ENST00000459788 PICK1Q9NRD5 415 aa12.24□□□□□ -0.45
HDLBP-228ENST00000459788 GINM1Q9NU53 330 aa12.24□□□□□ -0.45
HDLBP-228ENST00000459788 HERC5Q9UII4 1024 aaKnown RBP12.24□□□□□ -0.45
HDLBP-228ENST00000459788 DBNLQ9UJU6 430 aaKnown RBP12.24□□□□□ -0.45
HDLBP-228ENST00000459788 SLC45A1Q9Y2W3 748 aa12.24□□□□□ -0.45
HDLBP-228ENST00000459788 SIPA1L1O43166 1804 aa12.23□□□□□ -0.45
HDLBP-228ENST00000459788 RAB11FIP3O75154 756 aa12.23□□□□□ -0.45
HDLBP-228ENST00000459788 CYP2E1P05181 493 aaPredicted RBP12.23□□□□□ -0.45
HDLBP-228ENST00000459788 PI16Q6UXB8 463 aa12.23□□□□□ -0.45
HDLBP-228ENST00000459788 TBC1D9Q6ZT07 1266 aa12.23□□□□□ -0.45
HDLBP-228ENST00000459788 SH3BP5LQ7L8J4 393 aa12.23□□□□□ -0.45
HDLBP-228ENST00000459788 FASTKD5Q7L8L6 764 aaKnown RBP12.23□□□□□ -0.45
HDLBP-228ENST00000459788 ZFPM1Q8IX07 1006 aa12.23□□□□□ -0.45
HDLBP-228ENST00000459788 FAM43AQ8N2R8 423 aa12.23□□□□□ -0.45
HDLBP-228ENST00000459788 KIF1BPQ96EK5 621 aa12.23□□□□□ -0.45
HDLBP-228ENST00000459788 EFCC1Q9HA90 598 aa12.23□□□□□ -0.45
HDLBP-228ENST00000459788 DDX4Q9NQI0 724 aaKnown RBP12.23□□□□□ -0.45
HDLBP-228ENST00000459788 LOC285556D6RIA3 1793 aa12.23□□□□□ -0.45
HDLBP-228ENST00000459788 DDTLA6NHG4 134 aaPredicted RBP12.22□□□□□ -0.45
HDLBP-228ENST00000459788 BTBD19C9JJ37 291 aa12.22□□□□□ -0.45
HDLBP-228ENST00000459788 PTPRAP18433 802 aa12.22□□□□□ -0.45
HDLBP-228ENST00000459788 KIF22Q14807 665 aa12.22□□□□□ -0.45
HDLBP-228ENST00000459788 TTF1Q15361 905 aaPredicted RBP12.22□□□□□ -0.45
HDLBP-228ENST00000459788 METTL16Q86W50 562 aaKnown RBP12.22□□□□□ -0.45
HDLBP-228ENST00000459788 TEX11Q8IYF3 940 aa12.22□□□□□ -0.45
HDLBP-228ENST00000459788 CLASRPQ8N2M8 674 aaKnown RBP12.22□□□□□ -0.45
HDLBP-228ENST00000459788 PIAS4Q8N2W9 510 aaPredicted RBP12.22□□□□□ -0.45
HDLBP-228ENST00000459788 RHPN1Q8TCX5 695 aa12.22□□□□□ -0.45
HDLBP-228ENST00000459788 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.22□□□□□ -0.45
HDLBP-228ENST00000459788 PI4KBQ9UBF8 816 aa12.22□□□□□ -0.45
HDLBP-228ENST00000459788 TAOK2Q9UL54 1235 aa12.22□□□□□ -0.45
HDLBP-228ENST00000459788 PTPN22Q9Y2R2 807 aa12.22□□□□□ -0.45
HDLBP-228ENST00000459788 TRIM17Q9Y577 477 aa12.22□□□□□ -0.45
HDLBP-228ENST00000459788 HTTP42858 3142 aa12.22□□□□□ -0.45
HDLBP-228ENST00000459788 TNRC18O15417 2968 aaPredicted RBP12.22□□□□□ -0.45
HDLBP-228ENST00000459788 A0A0G2JLL6 359 aaPredicted RBP12.21□□□□□ -0.45
HDLBP-228ENST00000459788 MAP3K12Q12852 859 aa12.21□□□□□ -0.45
HDLBP-228ENST00000459788 PICALMQ13492 652 aa12.21□□□□□ -0.45
HDLBP-228ENST00000459788 MOGSQ13724 837 aa12.21□□□□□ -0.45
HDLBP-228ENST00000459788 PRRT2Q7Z6L0 340 aaPredicted RBP12.21□□□□□ -0.45
HDLBP-228ENST00000459788 FOXP4Q8IVH2 680 aaPredicted RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 189.1 ms