RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 RAB11FIP3O75154 756 aa19.82■□□□□ 0.76
CPSF6-203ENST00000456847 WDHD1O75717 1129 aaPredicted RBP19.82■□□□□ 0.76
CPSF6-203ENST00000456847 OTUD7BQ6GQQ9 843 aa19.82■□□□□ 0.76
CPSF6-203ENST00000456847 SPDYE5A6NIY4 337 aa19.81■□□□□ 0.76
CPSF6-203ENST00000456847 RHBDL3P58872 404 aa19.81■□□□□ 0.76
CPSF6-203ENST00000456847 DDX4Q9NQI0 724 aaKnown RBP19.81■□□□□ 0.76
CPSF6-203ENST00000456847 PIH1D3Q9NQM4 214 aaKnown RBP19.81■□□□□ 0.76
CPSF6-203ENST00000456847 IFIT2P09913 472 aaKnown RBP19.8■□□□□ 0.76
CPSF6-203ENST00000456847 INPP5BP32019 993 aa19.8■□□□□ 0.76
CPSF6-203ENST00000456847 ERO1BQ86YB8 467 aa19.8■□□□□ 0.76
CPSF6-203ENST00000456847 TEX11Q8IYF3 940 aa19.8■□□□□ 0.76
CPSF6-203ENST00000456847 IGF2BP3O00425 579 aaKnown RBP eCLIP19.8■□□□□ 0.76
CPSF6-203ENST00000456847 MAP4K4O95819 1239 aaPredicted RBP19.8■□□□□ 0.76
CPSF6-203ENST00000456847 GTF2A2P52657 109 aa19.8■□□□□ 0.76
CPSF6-203ENST00000456847 ABHD8Q96I13 439 aa19.8■□□□□ 0.76
CPSF6-203ENST00000456847 MCOLN1Q9GZU1 580 aa19.8■□□□□ 0.76
CPSF6-203ENST00000456847 CDK5RAP2Q96SN8 1893 aa19.79■□□□□ 0.76
CPSF6-203ENST00000456847 IDH1O75874 414 aaKnown RBP19.79■□□□□ 0.76
CPSF6-203ENST00000456847 BAG3O95817 575 aa19.79■□□□□ 0.76
CPSF6-203ENST00000456847 AATFQ9NY61 560 aaKnown RBP eCLIP19.79■□□□□ 0.765e-19■■■■■ 27.9
CPSF6-203ENST00000456847 NDUFB9Q9Y6M9 179 aa19.79■□□□□ 0.76
CPSF6-203ENST00000456847 CCL15-CCL14A0A0B4J2E2 113 aa19.78■□□□□ 0.76
CPSF6-203ENST00000456847 CCL15Q16663 113 aa19.78■□□□□ 0.76
CPSF6-203ENST00000456847 ZNF296Q8WUU4 475 aaPredicted RBP19.78■□□□□ 0.76
CPSF6-203ENST00000456847 FOCADQ5VW36 1801 aa19.78■□□□□ 0.76
CPSF6-203ENST00000456847 DDTLA6NHG4 134 aaPredicted RBP19.78■□□□□ 0.76
CPSF6-203ENST00000456847 GPR25O00155 361 aa19.78■□□□□ 0.76
CPSF6-203ENST00000456847 PLCG2P16885 1265 aa19.78■□□□□ 0.76
CPSF6-203ENST00000456847 RRP1P56182 461 aaKnown RBP19.78■□□□□ 0.76
CPSF6-203ENST00000456847 SH3BP5LQ7L8J4 393 aa19.78■□□□□ 0.76
CPSF6-203ENST00000456847 SH3RF3Q8TEJ3 882 aaPredicted RBP19.78■□□□□ 0.76
CPSF6-203ENST00000456847 DOCK1Q14185 1865 aa19.78■□□□□ 0.76
CPSF6-203ENST00000456847 IGSF3O75054 1194 aa19.77■□□□□ 0.76
CPSF6-203ENST00000456847 PPIL2Q13356 520 aa19.77■□□□□ 0.76
CPSF6-203ENST00000456847 CFHR5Q9BXR6 569 aa19.77■□□□□ 0.76
CPSF6-203ENST00000456847 ZNF112Q9UJU3 913 aa19.77■□□□□ 0.76
CPSF6-203ENST00000456847 ATRNL1Q5VV63 1379 aa19.77■□□□□ 0.76
CPSF6-203ENST00000456847 TESPA1A2RU30 521 aaPredicted RBP19.76■□□□□ 0.75
CPSF6-203ENST00000456847 CYP7A1P22680 504 aa19.76■□□□□ 0.75
CPSF6-203ENST00000456847 BRI3BPQ8WY22 251 aa19.76■□□□□ 0.75
CPSF6-203ENST00000456847 MS4A4AQ96JQ5 239 aa19.76■□□□□ 0.75
CPSF6-203ENST00000456847 COL2A1P02458 1487 aaPredicted RBP19.76■□□□□ 0.75
CPSF6-203ENST00000456847 NPM3O75607 178 aaKnown RBP19.76■□□□□ 0.75
CPSF6-203ENST00000456847 CTU1Q7Z7A3 348 aaKnown RBP19.76■□□□□ 0.75
CPSF6-203ENST00000456847 ADGRA1Q86SQ6 560 aa19.76■□□□□ 0.75
CPSF6-203ENST00000456847 OSBPL5Q9H0X9 879 aaPredicted RBP19.76■□□□□ 0.75
CPSF6-203ENST00000456847 R3HDMLQ9H3Y0 253 aa19.76■□□□□ 0.75
CPSF6-203ENST00000456847 FKTNO75072 461 aa19.75■□□□□ 0.75
CPSF6-203ENST00000456847 CETPP11597 493 aa19.75■□□□□ 0.75
CPSF6-203ENST00000456847 PPATQ06203 517 aa19.75■□□□□ 0.75
CPSF6-203ENST00000456847 MAP3K12Q12852 859 aa19.75■□□□□ 0.75
CPSF6-203ENST00000456847 SNAPC2Q13487 334 aa19.75■□□□□ 0.75
CPSF6-203ENST00000456847 NOM1Q5C9Z4 860 aaKnown RBP19.75■□□□□ 0.75
CPSF6-203ENST00000456847 NOL9Q5SY16 702 aaKnown RBP19.75■□□□□ 0.75
CPSF6-203ENST00000456847 MAGEB6Q8N7X4 407 aa19.75■□□□□ 0.75
CPSF6-203ENST00000456847 DNAJC2Q99543 621 aaKnown RBP19.75■□□□□ 0.75
CPSF6-203ENST00000456847 PTPN18Q99952 460 aa19.75■□□□□ 0.75
CPSF6-203ENST00000456847 LRRCC1Q9C099 1032 aa19.75■□□□□ 0.75
CPSF6-203ENST00000456847 ANTXR1Q9H6X2 564 aa19.75■□□□□ 0.75
CPSF6-203ENST00000456847 IRF6O14896 467 aa19.74■□□□□ 0.75
CPSF6-203ENST00000456847 PICK1Q9NRD5 415 aa19.74■□□□□ 0.75
CPSF6-203ENST00000456847 ATAD5Q96QE3 1844 aa19.74■□□□□ 0.75
CPSF6-203ENST00000456847 CRHR2Q13324 411 aa19.74■□□□□ 0.75
CPSF6-203ENST00000456847 TTF1Q15361 905 aaPredicted RBP19.74■□□□□ 0.75
CPSF6-203ENST00000456847 PPP4CP60510 307 aa19.73■□□□□ 0.75
CPSF6-203ENST00000456847 TAF1CQ15572 869 aaPredicted RBP19.73■□□□□ 0.75
CPSF6-203ENST00000456847 MAPKAPK5Q8IW41 473 aa19.73■□□□□ 0.75
CPSF6-203ENST00000456847 SCYL3Q8IZE3 742 aa19.73■□□□□ 0.75
CPSF6-203ENST00000456847 TGFBRAP1Q8WUH2 860 aa19.73■□□□□ 0.75
CPSF6-203ENST00000456847 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.73■□□□□ 0.75
CPSF6-203ENST00000456847 CCDC85CA6NKD9 419 aa19.72■□□□□ 0.75
CPSF6-203ENST00000456847 SLURP2P0DP57 97 aa19.72■□□□□ 0.75
CPSF6-203ENST00000456847 DYNLL1P63167 89 aaKnown RBP19.72■□□□□ 0.75
CPSF6-203ENST00000456847 MIGA1Q8NAN2 632 aa19.72■□□□□ 0.75
CPSF6-203ENST00000456847 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.72■□□□□ 0.75
CPSF6-203ENST00000456847 MYH1P12882 1939 aa19.72■□□□□ 0.75
CPSF6-203ENST00000456847 FAM196BA6NMK8 535 aa19.72■□□□□ 0.75
CPSF6-203ENST00000456847 PHF20L1A8MW92 1017 aa19.72■□□□□ 0.75
CPSF6-203ENST00000456847 SMARCA5O60264 1052 aaPredicted RBP19.72■□□□□ 0.75
CPSF6-203ENST00000456847 SIPA1L1O43166 1804 aa19.72■□□□□ 0.75
CPSF6-203ENST00000456847 FLT1P17948 1338 aa19.71■□□□□ 0.75
CPSF6-203ENST00000456847 GOLIM4O00461 696 aa19.71■□□□□ 0.75
CPSF6-203ENST00000456847 FAM43AQ8N2R8 423 aa19.71■□□□□ 0.75
CPSF6-203ENST00000456847 ZFYVE28Q9HCC9 887 aa19.71■□□□□ 0.75
CPSF6-203ENST00000456847 MAP3K10Q02779 954 aa19.7■□□□□ 0.74
CPSF6-203ENST00000456847 CERS3Q8IU89 383 aa19.7■□□□□ 0.74
CPSF6-203ENST00000456847 TBC1D12O60347 775 aa19.7■□□□□ 0.74
CPSF6-203ENST00000456847 CTNND1O60716 968 aaKnown RBP19.7■□□□□ 0.74
CPSF6-203ENST00000456847 TRIM34Q9BYJ4 488 aa19.7■□□□□ 0.74
CPSF6-203ENST00000456847 DHX36Q9H2U1 1008 aaKnown RBP19.7■□□□□ 0.74
CPSF6-203ENST00000456847 BOLA2Q9H3K6 86 aa19.7■□□□□ 0.74
CPSF6-203ENST00000456847 MYH7P12883 1935 aa19.7■□□□□ 0.74
CPSF6-203ENST00000456847 NAV1Q8NEY1 1877 aa19.7■□□□□ 0.74
CPSF6-203ENST00000456847 PHIPQ8WWQ0 1821 aa19.69■□□□□ 0.74
CPSF6-203ENST00000456847 BTBD19C9JJ37 291 aa19.69■□□□□ 0.74
CPSF6-203ENST00000456847 USP5P45974 858 aa19.69■□□□□ 0.74
CPSF6-203ENST00000456847 TMED8Q6PL24 325 aaPredicted RBP19.69■□□□□ 0.74
CPSF6-203ENST00000456847 CRBNQ96SW2 442 aa19.69■□□□□ 0.74
CPSF6-203ENST00000456847 SAP30BPQ9UHR5 308 aaKnown RBP19.69■□□□□ 0.74
CPSF6-203ENST00000456847 KCNH4Q9UQ05 1017 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms