RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 EMBQ6PCB8 327 aa5.59□□□□□ -1.51
PCDH9-203ENST00000456367 RASEFQ8IZ41 740 aa5.59□□□□□ -1.51
PCDH9-203ENST00000456367 ARHGAP18Q8N392 663 aa5.59□□□□□ -1.51
PCDH9-203ENST00000456367 DDX27Q96GQ7 796 aaKnown RBP5.59□□□□□ -1.51
PCDH9-203ENST00000456367 KLHL14Q9P2G3 628 aa5.59□□□□□ -1.51
PCDH9-203ENST00000456367 PZPP20742 1482 aa5.59□□□□□ -1.51
PCDH9-203ENST00000456367 TLDC2A0PJX2 215 aa5.59□□□□□ -1.51
PCDH9-203ENST00000456367 HMGB1P1B2RPK0 211 aaPredicted RBP5.59□□□□□ -1.51
PCDH9-203ENST00000456367 PEX19P40855 299 aa5.59□□□□□ -1.51
PCDH9-203ENST00000456367 AFMP43652 599 aa5.59□□□□□ -1.51
PCDH9-203ENST00000456367 RNASELQ05823 741 aaKnown RBP5.59□□□□□ -1.51
PCDH9-203ENST00000456367 PKP1Q13835 747 aa5.59□□□□□ -1.51
PCDH9-203ENST00000456367 CDC37L1Q7L3B6 337 aa5.59□□□□□ -1.51
PCDH9-203ENST00000456367 PLA2G4DQ86XP0 818 aa5.59□□□□□ -1.51
PCDH9-203ENST00000456367 SYCE1Q8N0S2 351 aa5.59□□□□□ -1.51
PCDH9-203ENST00000456367 C8orf58Q8NAV2 365 aa5.59□□□□□ -1.51
PCDH9-203ENST00000456367 MCUR1Q96AQ8 359 aa5.59□□□□□ -1.51
PCDH9-203ENST00000456367 TSC22D3Q99576 134 aa5.59□□□□□ -1.51
PCDH9-203ENST00000456367 BICC1Q9H694 974 aaKnown RBP5.59□□□□□ -1.51
PCDH9-203ENST00000456367 RABGAP1Q9Y3P9 1069 aa5.59□□□□□ -1.51
PCDH9-203ENST00000456367 CREB3O43889 395 aa5.59□□□□□ -1.51
PCDH9-203ENST00000456367 PPFIA2O75334 1257 aa5.59□□□□□ -1.51
PCDH9-203ENST00000456367 NR1I2O75469 434 aa5.59□□□□□ -1.51
PCDH9-203ENST00000456367 SUN1O94901 812 aa5.59□□□□□ -1.51
PCDH9-203ENST00000456367 FNBP4Q8N3X1 1017 aaPredicted RBP5.59□□□□□ -1.51
PCDH9-203ENST00000456367 DHX58Q96C10 678 aa5.59□□□□□ -1.51
PCDH9-203ENST00000456367 BPIFA3Q9BQP9 254 aa5.59□□□□□ -1.51
PCDH9-203ENST00000456367 MMRN2Q9H8L6 949 aa5.59□□□□□ -1.51
PCDH9-203ENST00000456367 ADGRL2O95490 1459 aa5.59□□□□□ -1.52
PCDH9-203ENST00000456367 CCDC169A6NNP5 214 aa5.58□□□□□ -1.52
PCDH9-203ENST00000456367 G3V3G9 751 aa5.58□□□□□ -1.52
PCDH9-203ENST00000456367 CASQ2O14958 399 aaPredicted RBP5.58□□□□□ -1.52
PCDH9-203ENST00000456367 PPP1R12AO14974 1030 aaPredicted RBP5.58□□□□□ -1.52
PCDH9-203ENST00000456367 PRC1O43663 620 aa5.58□□□□□ -1.52
PCDH9-203ENST00000456367 ERCC5P28715 1186 aaPredicted RBP5.58□□□□□ -1.52
PCDH9-203ENST00000456367 TBC1D8BQ0IIM8 1120 aa5.58□□□□□ -1.52
PCDH9-203ENST00000456367 MLECQ14165 292 aa5.58□□□□□ -1.52
PCDH9-203ENST00000456367 PPP2R5BQ15173 497 aa5.58□□□□□ -1.52
PCDH9-203ENST00000456367 RTN1Q16799 776 aa5.58□□□□□ -1.52
PCDH9-203ENST00000456367 KRT71Q3SY84 523 aa5.58□□□□□ -1.52
PCDH9-203ENST00000456367 DCAF8Q5TAQ9 597 aa5.58□□□□□ -1.52
PCDH9-203ENST00000456367 MEX3CQ5U5Q3 659 aaKnown RBP5.58□□□□□ -1.52
PCDH9-203ENST00000456367 CCDC62Q6P9F0 684 aa5.58□□□□□ -1.52
PCDH9-203ENST00000456367 TEX11Q8IYF3 940 aa5.58□□□□□ -1.52
PCDH9-203ENST00000456367 OSBPL9Q96SU4 736 aa5.58□□□□□ -1.52
PCDH9-203ENST00000456367 TUBB6Q9BUF5 446 aa5.58□□□□□ -1.52
PCDH9-203ENST00000456367 Q9H521 79 aa5.58□□□□□ -1.52
PCDH9-203ENST00000456367 KCNK9Q9NPC2 374 aa5.58□□□□□ -1.52
PCDH9-203ENST00000456367 PPANQ9NQ55 473 aaKnown RBP5.58□□□□□ -1.52
PCDH9-203ENST00000456367 STAP2Q9UGK3 403 aa5.58□□□□□ -1.52
PCDH9-203ENST00000456367 NRBP1Q9UHY1 535 aa5.58□□□□□ -1.52
PCDH9-203ENST00000456367 SCOCQ9UIL1 159 aa5.58□□□□□ -1.52
PCDH9-203ENST00000456367 PFDN1O60925 122 aa5.58□□□□□ -1.52
PCDH9-203ENST00000456367 LMNAP02545 664 aaKnown RBP5.58□□□□□ -1.52
PCDH9-203ENST00000456367 SKIP12755 728 aa5.58□□□□□ -1.52
PCDH9-203ENST00000456367 MAGEA1P43355 309 aa5.58□□□□□ -1.52
PCDH9-203ENST00000456367 GNAQP50148 359 aa5.58□□□□□ -1.52
PCDH9-203ENST00000456367 POSTNQ15063 836 aa5.58□□□□□ -1.52
PCDH9-203ENST00000456367 RASIP1Q5U651 963 aa5.58□□□□□ -1.52
PCDH9-203ENST00000456367 FBXO41Q8TF61 875 aa5.58□□□□□ -1.52
PCDH9-203ENST00000456367 PANX2Q96RD6 677 aa5.58□□□□□ -1.52
PCDH9-203ENST00000456367 DONSONQ9NYP3 566 aa5.58□□□□□ -1.52
PCDH9-203ENST00000456367 SEC63Q9UGP8 760 aaKnown RBP5.58□□□□□ -1.52
PCDH9-203ENST00000456367 ANAPC4Q9UJX5 808 aa5.58□□□□□ -1.52
PCDH9-203ENST00000456367 DNMT1P26358 1616 aaKnown RBP5.58□□□□□ -1.52
PCDH9-203ENST00000456367 CYP2E1P05181 493 aaPredicted RBP5.58□□□□□ -1.52
PCDH9-203ENST00000456367 ATP2A2P16615 1042 aaKnown RBP5.58□□□□□ -1.52
PCDH9-203ENST00000456367 ZC3H6P61129 1189 aaKnown RBP5.58□□□□□ -1.52
PCDH9-203ENST00000456367 IFT88Q13099 833 aa5.58□□□□□ -1.52
PCDH9-203ENST00000456367 PAK1Q13153 545 aa5.58□□□□□ -1.52
PCDH9-203ENST00000456367 TMEM51Q9NW97 253 aa5.58□□□□□ -1.52
PCDH9-203ENST00000456367 RTL9Q8NET4 1388 aa5.58□□□□□ -1.52
PCDH9-203ENST00000456367 KIAA0232Q92628 1395 aa5.58□□□□□ -1.52
PCDH9-203ENST00000456367 GPATCH8Q9UKJ3 1502 aaKnown RBP5.58□□□□□ -1.52
PCDH9-203ENST00000456367 MACROD2A1Z1Q3 448 aa5.58□□□□□ -1.52
PCDH9-203ENST00000456367 CFAP73A6NFT4 308 aa5.58□□□□□ -1.52
PCDH9-203ENST00000456367 IDH1O75874 414 aaKnown RBP5.58□□□□□ -1.52
PCDH9-203ENST00000456367 ELF1P32519 619 aa5.58□□□□□ -1.52
PCDH9-203ENST00000456367 CORO7P57737 925 aa5.58□□□□□ -1.52
PCDH9-203ENST00000456367 BIRC2Q13490 618 aa5.58□□□□□ -1.52
PCDH9-203ENST00000456367 WTAPQ15007 396 aa5.58□□□□□ -1.52
PCDH9-203ENST00000456367 SLC9C1Q4G0N8 1177 aa5.58□□□□□ -1.52
PCDH9-203ENST00000456367 GRIPAP1Q4V328 841 aa5.58□□□□□ -1.52
PCDH9-203ENST00000456367 GLE1Q53GS7 698 aaKnown RBP5.58□□□□□ -1.52
PCDH9-203ENST00000456367 MFSD6Q6ZSS7 791 aa5.58□□□□□ -1.52
PCDH9-203ENST00000456367 MICU3Q86XE3 530 aa5.58□□□□□ -1.52
PCDH9-203ENST00000456367 PPP1R14CQ8TAE6 165 aa5.58□□□□□ -1.52
PCDH9-203ENST00000456367 WHAMMQ8TF30 809 aa5.58□□□□□ -1.52
PCDH9-203ENST00000456367 FERMT2Q96AC1 680 aa5.58□□□□□ -1.52
PCDH9-203ENST00000456367 ZNF274Q96GC6 653 aaPredicted RBP5.58□□□□□ -1.52
PCDH9-203ENST00000456367 CSRNP2Q9H175 543 aa5.58□□□□□ -1.52
PCDH9-203ENST00000456367 CTTNBP2NLQ9P2B4 639 aa5.58□□□□□ -1.52
PCDH9-203ENST00000456367 RCOR1Q9UKL0 485 aa5.58□□□□□ -1.52
PCDH9-203ENST00000456367 HOXA7P31268 230 aaPredicted RBP5.57□□□□□ -1.52
PCDH9-203ENST00000456367 CTNNA1P35221 906 aaKnown RBP5.57□□□□□ -1.52
PCDH9-203ENST00000456367 PLCD1P51178 756 aa5.57□□□□□ -1.52
PCDH9-203ENST00000456367 ST5P78524 1137 aa5.57□□□□□ -1.52
PCDH9-203ENST00000456367 DENND2CQ68D51 928 aa5.57□□□□□ -1.52
PCDH9-203ENST00000456367 TMEM87BQ96K49 555 aa5.57□□□□□ -1.52
PCDH9-203ENST00000456367 KDM5CP41229 1560 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms