RNA–Protein interactions for RNA: ENST00000455841.6

GTF2IRD1-203, Transcript of GTF2I repeat domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene GTF2IRD1, Length 3,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD1-203ENST00000455841 ZSCAN16Q9H4T2 348 aaPredicted RBP17.76■□□□□ 0.43
GTF2IRD1-203ENST00000455841 TNKSO95271 1327 aa17.76■□□□□ 0.43
GTF2IRD1-203ENST00000455841 TSPY2A6NKD2 308 aa17.75■□□□□ 0.43
GTF2IRD1-203ENST00000455841 KINO60870 393 aaKnown RBP17.75■□□□□ 0.43
GTF2IRD1-203ENST00000455841 KRT40Q6A162 431 aa17.75■□□□□ 0.43
GTF2IRD1-203ENST00000455841 LY9Q9HBG7 655 aa17.75■□□□□ 0.43
GTF2IRD1-203ENST00000455841 LDHBP07195 334 aaKnown RBP17.75■□□□□ 0.43
GTF2IRD1-203ENST00000455841 CCDC192P0DO97 292 aa17.75■□□□□ 0.43
GTF2IRD1-203ENST00000455841 PICALMQ13492 652 aa17.75■□□□□ 0.43
GTF2IRD1-203ENST00000455841 TXNRD1Q16881 649 aa17.75■□□□□ 0.43
GTF2IRD1-203ENST00000455841 ANO6Q4KMQ2 910 aa17.75■□□□□ 0.43
GTF2IRD1-203ENST00000455841 SLC44A5Q8NCS7 719 aa17.75■□□□□ 0.43
GTF2IRD1-203ENST00000455841 TGFBRAP1Q8WUH2 860 aa17.75■□□□□ 0.43
GTF2IRD1-203ENST00000455841 GYS1P13807 737 aa17.75■□□□□ 0.43
GTF2IRD1-203ENST00000455841 SSRP1Q08945 709 aaKnown RBP17.75■□□□□ 0.43
GTF2IRD1-203ENST00000455841 ZNF384Q8TF68 577 aa17.75■□□□□ 0.43
GTF2IRD1-203ENST00000455841 ZNF512BQ96KM6 892 aaPredicted RBP17.75■□□□□ 0.43
GTF2IRD1-203ENST00000455841 AKAP11Q9UKA4 1901 aa17.75■□□□□ 0.43
GTF2IRD1-203ENST00000455841 DOK7Q18PE1 504 aa17.74■□□□□ 0.43
GTF2IRD1-203ENST00000455841 KRT23Q9C075 422 aa17.74■□□□□ 0.43
GTF2IRD1-203ENST00000455841 ANKRD2Q9GZV1 360 aa17.74■□□□□ 0.43
GTF2IRD1-203ENST00000455841 ALDH8A1Q9H2A2 487 aaPredicted RBP17.74■□□□□ 0.43
GTF2IRD1-203ENST00000455841 COL22A1Q8NFW1 1626 aaPredicted RBP17.74■□□□□ 0.43
GTF2IRD1-203ENST00000455841 GPSM2P81274 684 aa17.74■□□□□ 0.43
GTF2IRD1-203ENST00000455841 RC3H1Q5TC82 1133 aaKnown RBP17.74■□□□□ 0.43
GTF2IRD1-203ENST00000455841 FBXO18Q8NFZ0 1043 aa17.74■□□□□ 0.43
GTF2IRD1-203ENST00000455841 IGDCC4Q8TDY8 1250 aa17.74■□□□□ 0.43
GTF2IRD1-203ENST00000455841 ESR2Q92731 530 aa17.74■□□□□ 0.43
GTF2IRD1-203ENST00000455841 NOL10Q9BSC4 688 aaKnown RBP17.74■□□□□ 0.43
GTF2IRD1-203ENST00000455841 IFIT1BQ5T764 474 aaKnown RBP17.74■□□□□ 0.43
GTF2IRD1-203ENST00000455841 MXD3Q9BW11 206 aa17.74■□□□□ 0.43
GTF2IRD1-203ENST00000455841 STX8Q9UNK0 236 aa17.74■□□□□ 0.43
GTF2IRD1-203ENST00000455841 ADCY5O95622 1261 aa17.73■□□□□ 0.43
GTF2IRD1-203ENST00000455841 TYRO3Q06418 890 aa17.73■□□□□ 0.43
GTF2IRD1-203ENST00000455841 TRIM22Q8IYM9 498 aa17.73■□□□□ 0.43
GTF2IRD1-203ENST00000455841 CRNKL1Q9BZJ0 848 aaKnown RBP17.73■□□□□ 0.43
GTF2IRD1-203ENST00000455841 MKNK2Q9HBH9 465 aa17.73■□□□□ 0.43
GTF2IRD1-203ENST00000455841 NRAPQ86VF7 1730 aa17.73■□□□□ 0.43
GTF2IRD1-203ENST00000455841 BTBD18B2RXH4 712 aa17.73■□□□□ 0.43
GTF2IRD1-203ENST00000455841 ZNF654Q8IZM8 581 aa17.73■□□□□ 0.43
GTF2IRD1-203ENST00000455841 FAM43AQ8N2R8 423 aa17.73■□□□□ 0.43
GTF2IRD1-203ENST00000455841 PDILTQ8N807 584 aa17.73■□□□□ 0.43
GTF2IRD1-203ENST00000455841 NSUN4Q96CB9 384 aaKnown RBP17.73■□□□□ 0.43
GTF2IRD1-203ENST00000455841 TMEM87AQ8NBN3 555 aa17.72■□□□□ 0.43
GTF2IRD1-203ENST00000455841 GOLPH3LQ9H4A5 285 aa17.72■□□□□ 0.43
GTF2IRD1-203ENST00000455841 VPS54Q9P1Q0 977 aa17.72■□□□□ 0.43
GTF2IRD1-203ENST00000455841 GNAT2P19087 354 aa17.72■□□□□ 0.43
GTF2IRD1-203ENST00000455841 GTF2IP78347 998 aa17.72■□□□□ 0.43
GTF2IRD1-203ENST00000455841 GRAPQ13588 217 aa17.72■□□□□ 0.43
GTF2IRD1-203ENST00000455841 IQCA1Q86XH1 822 aa17.72■□□□□ 0.43
GTF2IRD1-203ENST00000455841 GRAPLQ8TC17 118 aaPredicted RBP17.72■□□□□ 0.43
GTF2IRD1-203ENST00000455841 CLIC6Q96NY7 704 aa17.72■□□□□ 0.43
GTF2IRD1-203ENST00000455841 NR5A1Q13285 461 aa17.72■□□□□ 0.43
GTF2IRD1-203ENST00000455841 DNTTIP2Q5QJE6 756 aaKnown RBP17.72■□□□□ 0.43
GTF2IRD1-203ENST00000455841 ILDR1Q86SU0 546 aaPredicted RBP17.72■□□□□ 0.43
GTF2IRD1-203ENST00000455841 TMEM87BQ96K49 555 aa17.72■□□□□ 0.43
GTF2IRD1-203ENST00000455841 AGXT2Q9BYV1 514 aa17.72■□□□□ 0.43
GTF2IRD1-203ENST00000455841 RNF41Q9H4P4 317 aaPredicted RBP17.72■□□□□ 0.43
GTF2IRD1-203ENST00000455841 CNNM2Q9H8M5 875 aa17.72■□□□□ 0.43
GTF2IRD1-203ENST00000455841 CDKL5O76039 1030 aa17.71■□□□□ 0.43
GTF2IRD1-203ENST00000455841 C17orf53Q8N3J3 647 aaPredicted RBP17.71■□□□□ 0.43
GTF2IRD1-203ENST00000455841 TTC12Q9H892 705 aaPredicted RBP17.71■□□□□ 0.43
GTF2IRD1-203ENST00000455841 PCDHA7Q9UN72 937 aa17.71■□□□□ 0.43
GTF2IRD1-203ENST00000455841 ZMYM6O95789 1325 aa17.71■□□□□ 0.43
GTF2IRD1-203ENST00000455841 TM4SF1P30408 202 aa17.71■□□□□ 0.43
GTF2IRD1-203ENST00000455841 ATP2B2Q01814 1243 aa17.71■□□□□ 0.43
GTF2IRD1-203ENST00000455841 MYSM1Q5VVJ2 828 aa17.71■□□□□ 0.43
GTF2IRD1-203ENST00000455841 SH3RF3Q8TEJ3 882 aaPredicted RBP17.71■□□□□ 0.43
GTF2IRD1-203ENST00000455841 V9GY48 417 aaPredicted RBP17.71■□□□□ 0.43
GTF2IRD1-203ENST00000455841 COL1A1P02452 1464 aaPredicted RBP17.71■□□□□ 0.43
GTF2IRD1-203ENST00000455841 SCNN1DP51172 638 aa17.7■□□□□ 0.42
GTF2IRD1-203ENST00000455841 DDR1Q08345 913 aa17.7■□□□□ 0.42
GTF2IRD1-203ENST00000455841 SAFBQ15424 915 aaKnown RBP eCLIP17.7■□□□□ 0.42
GTF2IRD1-203ENST00000455841 MFSD14BQ5SR56 506 aa17.7■□□□□ 0.42
GTF2IRD1-203ENST00000455841 FBXO33Q7Z6M2 555 aa17.7■□□□□ 0.42
GTF2IRD1-203ENST00000455841 CPVLQ9H3G5 476 aa17.7■□□□□ 0.42
GTF2IRD1-203ENST00000455841 EIF6P56537 245 aaKnown RBP17.7■□□□□ 0.42
GTF2IRD1-203ENST00000455841 SLC10A5Q5PT55 438 aa17.7■□□□□ 0.42
GTF2IRD1-203ENST00000455841 RIOK1Q9BRS2 568 aaKnown RBP17.7■□□□□ 0.42
GTF2IRD1-203ENST00000455841 GGA1Q9UJY5 639 aa17.7■□□□□ 0.42
GTF2IRD1-203ENST00000455841 MRVI1Q9Y6F6 885 aa17.7■□□□□ 0.42
GTF2IRD1-203ENST00000455841 SPTLC2O15270 562 aa17.7■□□□□ 0.42
GTF2IRD1-203ENST00000455841 PLEKHA8P1O95397 391 aa17.7■□□□□ 0.42
GTF2IRD1-203ENST00000455841 HSP90AA4PQ58FG1 418 aa17.7■□□□□ 0.42
GTF2IRD1-203ENST00000455841 CTR9Q6PD62 1173 aa17.7■□□□□ 0.42
GTF2IRD1-203ENST00000455841 ANKRD36CQ5JPF3 1778 aa17.69■□□□□ 0.42
GTF2IRD1-203ENST00000455841 LAMA4Q16363 1823 aa17.69■□□□□ 0.42
GTF2IRD1-203ENST00000455841 ZNF804AQ7Z570 1209 aa17.69■□□□□ 0.42
GTF2IRD1-203ENST00000455841 TRIM5Q9C035 493 aa17.69■□□□□ 0.42
GTF2IRD1-203ENST00000455841 VAT1LQ9HCJ6 419 aa17.69■□□□□ 0.42
GTF2IRD1-203ENST00000455841 BECN2A8MW95 431 aa17.69■□□□□ 0.42
GTF2IRD1-203ENST00000455841 KIF23Q02241 960 aaPredicted RBP17.69■□□□□ 0.42
GTF2IRD1-203ENST00000455841 DIS3L2Q8IYB7 885 aaKnown RBP17.69■□□□□ 0.42
GTF2IRD1-203ENST00000455841 DCP1AQ9NPI6 582 aaPredicted RBP17.69■□□□□ 0.42
GTF2IRD1-203ENST00000455841 MMP10P09238 476 aa17.68■□□□□ 0.42
GTF2IRD1-203ENST00000455841 SLURP2P0DP57 97 aa17.68■□□□□ 0.42
GTF2IRD1-203ENST00000455841 ZNF165P49910 485 aa17.68■□□□□ 0.42
GTF2IRD1-203ENST00000455841 CATIPQ7Z7H3 387 aa17.68■□□□□ 0.42
GTF2IRD1-203ENST00000455841 ENAHQ8N8S7 591 aaPredicted RBP17.68■□□□□ 0.42
GTF2IRD1-203ENST00000455841 FANCBQ8NB91 859 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms