RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 TIMELESSQ9UNS1 1208 aa7.35□□□□□ -1.23
SBDSP1-204ENST00000453858 ABCC12Q96J65 1359 aa7.34□□□□□ -1.23
SBDSP1-204ENST00000453858 BPTFQ12830 3046 aa7.34□□□□□ -1.23
SBDSP1-204ENST00000453858 NCOR2Q9Y618 2525 aa7.34□□□□□ -1.23
SBDSP1-204ENST00000453858 ACACBO00763 2458 aa7.34□□□□□ -1.23
SBDSP1-204ENST00000453858 PER1O15534 1290 aaPredicted RBP7.34□□□□□ -1.23
SBDSP1-204ENST00000453858 GNRH1P01148 92 aa7.34□□□□□ -1.23
SBDSP1-204ENST00000453858 VIL1P09327 827 aaKnown RBP7.34□□□□□ -1.23
SBDSP1-204ENST00000453858 BMP1P13497 986 aa7.34□□□□□ -1.23
SBDSP1-204ENST00000453858 CAPN2P17655 700 aa7.34□□□□□ -1.23
SBDSP1-204ENST00000453858 KCNH2Q12809 1159 aa7.34□□□□□ -1.23
SBDSP1-204ENST00000453858 DZIP3Q86Y13 1208 aaKnown RBP7.34□□□□□ -1.23
SBDSP1-204ENST00000453858 LRRN4Q8WUT4 740 aa7.34□□□□□ -1.23
SBDSP1-204ENST00000453858 WNK4Q96J92 1243 aa7.34□□□□□ -1.23
SBDSP1-204ENST00000453858 UNC93B1Q9H1C4 597 aa7.34□□□□□ -1.23
SBDSP1-204ENST00000453858 TAF1P21675 1872 aa7.34□□□□□ -1.23
SBDSP1-204ENST00000453858 RIF1Q5UIP0 2472 aaKnown RBP7.34□□□□□ -1.24
SBDSP1-204ENST00000453858 F12P00748 615 aaPredicted RBP7.33□□□□□ -1.24
SBDSP1-204ENST00000453858 GRK4P32298 578 aa7.33□□□□□ -1.24
SBDSP1-204ENST00000453858 MRPS5P82675 430 aaKnown RBP7.33□□□□□ -1.24
SBDSP1-204ENST00000453858 LACTBP83111 547 aaPredicted RBP7.33□□□□□ -1.24
SBDSP1-204ENST00000453858 EIF4A2Q14240 407 aaKnown RBP7.33□□□□□ -1.24
SBDSP1-204ENST00000453858 MAP3K11Q16584 847 aa7.33□□□□□ -1.24
SBDSP1-204ENST00000453858 OTUD7BQ6GQQ9 843 aa7.33□□□□□ -1.24
SBDSP1-204ENST00000453858 DIS3LQ8TF46 1054 aaKnown RBP7.33□□□□□ -1.24
SBDSP1-204ENST00000453858 GPKOWQ92917 476 aaPredicted RBP eCLIP7.33□□□□□ -1.24
SBDSP1-204ENST00000453858 SLC10A4Q96EP9 437 aa7.33□□□□□ -1.24
SBDSP1-204ENST00000453858 CLMNQ96JQ2 1002 aa7.33□□□□□ -1.24
SBDSP1-204ENST00000453858 NIP7Q9Y221 180 aaKnown RBP eCLIP7.33□□□□□ -1.24
SBDSP1-204ENST00000453858 COG6Q9Y2V7 657 aa7.33□□□□□ -1.24
SBDSP1-204ENST00000453858 RIPOR2Q9Y4F9 1068 aa7.33□□□□□ -1.24
SBDSP1-204ENST00000453858 FAM205AQ6ZU69 1335 aa7.32□□□□□ -1.24
SBDSP1-204ENST00000453858 ZSWIM8A7E2V4 1837 aa7.32□□□□□ -1.24
SBDSP1-204ENST00000453858 NRG2O14511 850 aaPredicted RBP7.32□□□□□ -1.24
SBDSP1-204ENST00000453858 GFRA3O60609 400 aa7.32□□□□□ -1.24
SBDSP1-204ENST00000453858 S1PR4O95977 384 aa7.32□□□□□ -1.24
SBDSP1-204ENST00000453858 CTHP32929 405 aa7.32□□□□□ -1.24
SBDSP1-204ENST00000453858 WASHC4Q2M389 1173 aa7.32□□□□□ -1.24
SBDSP1-204ENST00000453858 DPP8Q6V1X1 898 aaPredicted RBP7.32□□□□□ -1.24
SBDSP1-204ENST00000453858 SP8Q8IXZ3 490 aa7.32□□□□□ -1.24
SBDSP1-204ENST00000453858 ANKLE1Q8NAG6 615 aa7.32□□□□□ -1.24
SBDSP1-204ENST00000453858 RBM17Q96I25 401 aaKnown RBP7.32□□□□□ -1.24
SBDSP1-204ENST00000453858 GMLQ99445 158 aa7.32□□□□□ -1.24
SBDSP1-204ENST00000453858 TRIM34Q9BYJ4 488 aa7.32□□□□□ -1.24
SBDSP1-204ENST00000453858 SRRDQ9UH36 339 aa7.32□□□□□ -1.24
SBDSP1-204ENST00000453858 GPR179Q6PRD1 2367 aa7.31□□□□□ -1.24
SBDSP1-204ENST00000453858 FAM177BA6PVY3 158 aa7.31□□□□□ -1.24
SBDSP1-204ENST00000453858 SMIM22K7EJ46 135 aa7.31□□□□□ -1.24
SBDSP1-204ENST00000453858 TFRCP02786 760 aaKnown RBP7.31□□□□□ -1.24
SBDSP1-204ENST00000453858 NR6A1Q15406 480 aa7.31□□□□□ -1.24
SBDSP1-204ENST00000453858 HLFQ16534 295 aa7.31□□□□□ -1.24
SBDSP1-204ENST00000453858 ARMC9Q7Z3E5 817 aa7.31□□□□□ -1.24
SBDSP1-204ENST00000453858 NECAB2Q7Z6G3 386 aa7.31□□□□□ -1.24
SBDSP1-204ENST00000453858 RPGRQ92834 1020 aaKnown RBP7.31□□□□□ -1.24
SBDSP1-204ENST00000453858 TEX13AQ9BXU3 409 aaPredicted RBP7.31□□□□□ -1.24
SBDSP1-204ENST00000453858 HMX1Q9NP08 348 aaPredicted RBP7.31□□□□□ -1.24
SBDSP1-204ENST00000453858 PAK6Q9NQU5 681 aaPredicted RBP7.31□□□□□ -1.24
SBDSP1-204ENST00000453858 PRDM9Q9NQV7 894 aa7.31□□□□□ -1.24
SBDSP1-204ENST00000453858 POLKQ9UBT6 870 aa7.31□□□□□ -1.24
SBDSP1-204ENST00000453858 FZD1Q9UP38 647 aa7.31□□□□□ -1.24
SBDSP1-204ENST00000453858 ZNF330Q9Y3S2 320 aaPredicted RBP7.31□□□□□ -1.24
SBDSP1-204ENST00000453858 TCF20Q9UGU0 1960 aaKnown RBP7.31□□□□□ -1.24
SBDSP1-204ENST00000453858 ASH1LQ9NR48 2969 aaKnown RBP7.31□□□□□ -1.24
SBDSP1-204ENST00000453858 DUOX1Q9NRD9 1551 aa7.3□□□□□ -1.24
SBDSP1-204ENST00000453858 UNCXA6NJT0 531 aa7.3□□□□□ -1.24
SBDSP1-204ENST00000453858 PPM1GO15355 546 aaPredicted RBP7.3□□□□□ -1.24
SBDSP1-204ENST00000453858 GRIN2CQ14957 1233 aa7.3□□□□□ -1.24
SBDSP1-204ENST00000453858 NBPF9Q3BBW0 867 aa7.3□□□□□ -1.24
SBDSP1-204ENST00000453858 C1orf141Q5JVX7 400 aa7.3□□□□□ -1.24
SBDSP1-204ENST00000453858 TRIM47Q96LD4 638 aa7.3□□□□□ -1.24
SBDSP1-204ENST00000453858 DBNDD1Q9H9R9 158 aa7.3□□□□□ -1.24
SBDSP1-204ENST00000453858 GDPD2Q9HCC8 539 aa7.3□□□□□ -1.24
SBDSP1-204ENST00000453858 FKBPLQ9UIM3 349 aa7.3□□□□□ -1.24
SBDSP1-204ENST00000453858 GPSM3Q9Y4H4 160 aa7.3□□□□□ -1.24
SBDSP1-204ENST00000453858 UBR2Q8IWV8 1755 aa7.3□□□□□ -1.24
SBDSP1-204ENST00000453858 RNMTO43148 476 aaKnown RBP7.29□□□□□ -1.24
SBDSP1-204ENST00000453858 ZZEF1O43149 2961 aa7.29□□□□□ -1.24
SBDSP1-204ENST00000453858 ZBTB24O43167 697 aaPredicted RBP7.29□□□□□ -1.24
SBDSP1-204ENST00000453858 TLR2O60603 784 aa7.29□□□□□ -1.24
SBDSP1-204ENST00000453858 BBOX1O75936 387 aa7.29□□□□□ -1.24
SBDSP1-204ENST00000453858 PRKG1Q13976 671 aa7.29□□□□□ -1.24
SBDSP1-204ENST00000453858 TRAF7Q6Q0C0 670 aa7.29□□□□□ -1.24
SBDSP1-204ENST00000453858 BRI3BPQ8WY22 251 aa7.29□□□□□ -1.24
SBDSP1-204ENST00000453858 ZNF592Q92610 1267 aa7.29□□□□□ -1.24
SBDSP1-204ENST00000453858 DEFB118Q96PH6 123 aa7.29□□□□□ -1.24
SBDSP1-204ENST00000453858 ZFYVE28Q9HCC9 887 aa7.29□□□□□ -1.24
SBDSP1-204ENST00000453858 MYOZ2Q9NPC6 264 aa7.29□□□□□ -1.24
SBDSP1-204ENST00000453858 THEGQ9P2T0 379 aa7.29□□□□□ -1.24
SBDSP1-204ENST00000453858 ANGEL1Q9UNK9 670 aaKnown RBP7.29□□□□□ -1.24
SBDSP1-204ENST00000453858 FCF1Q9Y324 198 aaKnown RBP7.29□□□□□ -1.24
SBDSP1-204ENST00000453858 CACNA1HO95180 2353 aa7.28□□□□□ -1.24
SBDSP1-204ENST00000453858 SCN9AQ15858 1988 aa7.28□□□□□ -1.24
SBDSP1-204ENST00000453858 MYO9BQ13459 2157 aa7.28□□□□□ -1.24
SBDSP1-204ENST00000453858 FAM86C2PA6NEL3 165 aa7.28□□□□□ -1.24
SBDSP1-204ENST00000453858 RNF223E7ERA6 249 aa7.28□□□□□ -1.24
SBDSP1-204ENST00000453858 LCE2BO14633 110 aa7.28□□□□□ -1.24
SBDSP1-204ENST00000453858 TRAK2O60296 914 aa7.28□□□□□ -1.24
SBDSP1-204ENST00000453858 RPIAP49247 311 aa7.28□□□□□ -1.24
SBDSP1-204ENST00000453858 SMAD3P84022 425 aaKnown RBP7.28□□□□□ -1.24
SBDSP1-204ENST00000453858 PDXDC2PQ6P474 469 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms