RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 C1orf115Q9H7X2 142 aa19.64■□□□□ 0.73
SGCE-208ENST00000450385 ZFYVE28Q9HCC9 887 aa19.64■□□□□ 0.73
SGCE-208ENST00000450385 ZBTB40Q9NUA8 1239 aa19.64■□□□□ 0.73
SGCE-208ENST00000450385 COL2A1P02458 1487 aaPredicted RBP19.63■□□□□ 0.73
SGCE-208ENST00000450385 RFX7Q2KHR2 1363 aa19.63■□□□□ 0.73
SGCE-208ENST00000450385 CCL15-CCL14A0A0B4J2E2 113 aa19.63■□□□□ 0.73
SGCE-208ENST00000450385 CCL15Q16663 113 aa19.63■□□□□ 0.73
SGCE-208ENST00000450385 FBXO46Q6PJ61 603 aaPredicted RBP19.63■□□□□ 0.73
SGCE-208ENST00000450385 MIGA2Q7L4E1 593 aa19.63■□□□□ 0.73
SGCE-208ENST00000450385 ZKSCAN4Q969J2 545 aaPredicted RBP19.63■□□□□ 0.73
SGCE-208ENST00000450385 RAI14Q9P0K7 980 aa19.63■□□□□ 0.73
SGCE-208ENST00000450385 DOCK2Q92608 1830 aa19.62■□□□□ 0.73
SGCE-208ENST00000450385 ATRNL1Q5VV63 1379 aa19.62■□□□□ 0.73
SGCE-208ENST00000450385 RHBDL3P58872 404 aa19.62■□□□□ 0.73
SGCE-208ENST00000450385 PPP4CP60510 307 aa19.62■□□□□ 0.73
SGCE-208ENST00000450385 BRI3BPQ8WY22 251 aa19.62■□□□□ 0.73
SGCE-208ENST00000450385 DBNDD2Q9BQY9 259 aa19.62■□□□□ 0.73
SGCE-208ENST00000450385 CXCL11O14625 94 aa19.61■□□□□ 0.73
SGCE-208ENST00000450385 IRF6O14896 467 aa19.61■□□□□ 0.73
SGCE-208ENST00000450385 CTNND1O60716 968 aaKnown RBP19.61■□□□□ 0.73
SGCE-208ENST00000450385 SP3Q02447 781 aa19.61■□□□□ 0.73
SGCE-208ENST00000450385 CRHR2Q13324 411 aa19.61■□□□□ 0.73
SGCE-208ENST00000450385 NAA16Q6N069 864 aaPredicted RBP19.61■□□□□ 0.73
SGCE-208ENST00000450385 ZSCAN29Q8IWY8 852 aaPredicted RBP19.61■□□□□ 0.73
SGCE-208ENST00000450385 ZNF384Q8TF68 577 aa19.61■□□□□ 0.73
SGCE-208ENST00000450385 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.61■□□□□ 0.73
SGCE-208ENST00000450385 KCNH4Q9UQ05 1017 aa19.61■□□□□ 0.73
SGCE-208ENST00000450385 PHF20L1A8MW92 1017 aa19.6■□□□□ 0.73
SGCE-208ENST00000450385 RAB11FIP3O75154 756 aa19.6■□□□□ 0.73
SGCE-208ENST00000450385 TBC1D9Q6ZT07 1266 aa19.6■□□□□ 0.73
SGCE-208ENST00000450385 EAF2Q96CJ1 260 aaPredicted RBP19.6■□□□□ 0.73
SGCE-208ENST00000450385 KIF1BPQ96EK5 621 aa19.6■□□□□ 0.73
SGCE-208ENST00000450385 TBC1D2Q9BYX2 928 aa19.6■□□□□ 0.73
SGCE-208ENST00000450385 DHX36Q9H2U1 1008 aaKnown RBP19.6■□□□□ 0.73
SGCE-208ENST00000450385 R3HDMLQ9H3Y0 253 aa19.6■□□□□ 0.73
SGCE-208ENST00000450385 DBNLQ9UJU6 430 aaKnown RBP19.6■□□□□ 0.73
SGCE-208ENST00000450385 CYP2E1P05181 493 aaPredicted RBP19.59■□□□□ 0.73
SGCE-208ENST00000450385 INPP5BP32019 993 aa19.59■□□□□ 0.73
SGCE-208ENST00000450385 TAF1CQ15572 869 aaPredicted RBP19.59■□□□□ 0.73
SGCE-208ENST00000450385 PI16Q6UXB8 463 aa19.59■□□□□ 0.73
SGCE-208ENST00000450385 ZFPM1Q8IX07 1006 aa19.59■□□□□ 0.73
SGCE-208ENST00000450385 CNKSR2Q8WXI2 1034 aa19.59■□□□□ 0.73
SGCE-208ENST00000450385 PICK1Q9NRD5 415 aa19.59■□□□□ 0.73
SGCE-208ENST00000450385 ANKRD23Q86SG2 305 aa19.58■□□□□ 0.72
SGCE-208ENST00000450385 SCYL3Q8IZE3 742 aa19.58■□□□□ 0.72
SGCE-208ENST00000450385 CLASRPQ8N2M8 674 aaKnown RBP19.58■□□□□ 0.72
SGCE-208ENST00000450385 HERC5Q9UII4 1024 aaKnown RBP19.58■□□□□ 0.72
SGCE-208ENST00000450385 MAST2Q6P0Q8 1798 aa19.57■□□□□ 0.72
SGCE-208ENST00000450385 DDTLA6NHG4 134 aaPredicted RBP19.57■□□□□ 0.72
SGCE-208ENST00000450385 TLR2O60603 784 aa19.57■□□□□ 0.72
SGCE-208ENST00000450385 GNRH1P01148 92 aa19.57■□□□□ 0.72
SGCE-208ENST00000450385 TTF1Q15361 905 aaPredicted RBP19.57■□□□□ 0.72
SGCE-208ENST00000450385 SH3BP5LQ7L8J4 393 aa19.57■□□□□ 0.72
SGCE-208ENST00000450385 FASTKD5Q7L8L6 764 aaKnown RBP19.57■□□□□ 0.72
SGCE-208ENST00000450385 RHPN1Q8TCX5 695 aa19.57■□□□□ 0.72
SGCE-208ENST00000450385 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.57■□□□□ 0.72
SGCE-208ENST00000450385 CCDC8Q9H0W5 538 aaPredicted RBP19.57■□□□□ 0.72
SGCE-208ENST00000450385 OSBPL5Q9H0X9 879 aaPredicted RBP19.57■□□□□ 0.72
SGCE-208ENST00000450385 DDX4Q9NQI0 724 aaKnown RBP19.57■□□□□ 0.72
SGCE-208ENST00000450385 HPS5Q9UPZ3 1129 aa19.57■□□□□ 0.72
SGCE-208ENST00000450385 COG6Q9Y2V7 657 aa19.57■□□□□ 0.72
SGCE-208ENST00000450385 BTBD19C9JJ37 291 aa19.56■□□□□ 0.72
SGCE-208ENST00000450385 TEX11Q8IYF3 940 aa19.56■□□□□ 0.72
SGCE-208ENST00000450385 FAM43AQ8N2R8 423 aa19.56■□□□□ 0.72
SGCE-208ENST00000450385 PI4KBQ9UBF8 816 aa19.56■□□□□ 0.72
SGCE-208ENST00000450385 EXOC6BQ9Y2D4 811 aa19.56■□□□□ 0.72
SGCE-208ENST00000450385 PTPRAP18433 802 aa19.55■□□□□ 0.72
SGCE-208ENST00000450385 ZAP70P43403 619 aa19.55■□□□□ 0.72
SGCE-208ENST00000450385 MLLT1Q03111 559 aaPredicted RBP19.55■□□□□ 0.72
SGCE-208ENST00000450385 MAP3K12Q12852 859 aa19.55■□□□□ 0.72
SGCE-208ENST00000450385 PICALMQ13492 652 aa19.55■□□□□ 0.72
SGCE-208ENST00000450385 OTOP1Q7RTM1 612 aa19.55■□□□□ 0.72
SGCE-208ENST00000450385 AACSQ86V21 672 aa19.55■□□□□ 0.72
SGCE-208ENST00000450385 EFCC1Q9HA90 598 aa19.55■□□□□ 0.72
SGCE-208ENST00000450385 SNRKQ9NRH2 765 aa19.55■□□□□ 0.72
SGCE-208ENST00000450385 GINM1Q9NU53 330 aa19.55■□□□□ 0.72
SGCE-208ENST00000450385 SLC45A1Q9Y2W3 748 aa19.55■□□□□ 0.72
SGCE-208ENST00000450385 MYO5AQ9Y4I1 1855 aaKnown RBP19.55■□□□□ 0.72
SGCE-208ENST00000450385 FOCADQ5VW36 1801 aa19.54■□□□□ 0.72
SGCE-208ENST00000450385 KIF22Q14807 665 aa19.54■□□□□ 0.72
SGCE-208ENST00000450385 METTL16Q86W50 562 aaKnown RBP19.54■□□□□ 0.72
SGCE-208ENST00000450385 FOXP4Q8IVH2 680 aaPredicted RBP19.54■□□□□ 0.72
SGCE-208ENST00000450385 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.54■□□□□ 0.72
SGCE-208ENST00000450385 AFG3L2Q9Y4W6 797 aa19.54■□□□□ 0.72
SGCE-208ENST00000450385 TRIM17Q9Y577 477 aa19.54■□□□□ 0.72
SGCE-208ENST00000450385 PRMT2P55345 433 aa19.53■□□□□ 0.72
SGCE-208ENST00000450385 ZHX2Q9Y6X8 837 aa19.53■□□□□ 0.72
SGCE-208ENST00000450385 DOCK1Q14185 1865 aa19.53■□□□□ 0.72
SGCE-208ENST00000450385 A0A0G2JLL6 359 aaPredicted RBP19.52■□□□□ 0.72
SGCE-208ENST00000450385 IFIT2P09913 472 aaKnown RBP19.52■□□□□ 0.72
SGCE-208ENST00000450385 PRRT2Q7Z6L0 340 aaPredicted RBP19.52■□□□□ 0.72
SGCE-208ENST00000450385 SIRT2Q8IXJ6 389 aa19.52■□□□□ 0.72
SGCE-208ENST00000450385 SH3RF3Q8TEJ3 882 aaPredicted RBP19.52■□□□□ 0.72
SGCE-208ENST00000450385 AATFQ9NY61 560 aaKnown RBP eCLIP19.52■□□□□ 0.72
SGCE-208ENST00000450385 PTPN22Q9Y2R2 807 aa19.52■□□□□ 0.72
SGCE-208ENST00000450385 CDK5RAP2Q96SN8 1893 aa19.52■□□□□ 0.71
SGCE-208ENST00000450385 CENPFP49454 3210 aa19.51■□□□□ 0.71
SGCE-208ENST00000450385 PDHXO00330 501 aa19.51■□□□□ 0.71
SGCE-208ENST00000450385 CD99L2Q8TCZ2 262 aa19.51■□□□□ 0.71
SGCE-208ENST00000450385 TLR7Q9NYK1 1049 aaKnown RBP19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms