RNA–Protein interactions for RNA: ENST00000449784.5

COPS7B-214, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 978 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-214ENST00000449784 RNF225M0QZC1 329 aaPredicted RBP11.78□□□□□ -0.52
COPS7B-214ENST00000449784 IRS4O14654 1257 aaPredicted RBP11.78□□□□□ -0.52
COPS7B-214ENST00000449784 ALDH1L1O75891 902 aa11.78□□□□□ -0.52
COPS7B-214ENST00000449784 HCLS1P14317 486 aaPredicted RBP11.78□□□□□ -0.52
COPS7B-214ENST00000449784 NPR1P16066 1061 aa11.78□□□□□ -0.52
COPS7B-214ENST00000449784 HOXA10P31260 410 aaPredicted RBP11.78□□□□□ -0.52
COPS7B-214ENST00000449784 DALRD3Q5D0E6 543 aaKnown RBP11.78□□□□□ -0.52
COPS7B-214ENST00000449784 MASTLQ96GX5 879 aa11.78□□□□□ -0.52
COPS7B-214ENST00000449784 NLRP3Q96P20 1036 aa11.78□□□□□ -0.52
COPS7B-214ENST00000449784 API5Q9BZZ5 524 aaKnown RBP11.78□□□□□ -0.52
COPS7B-214ENST00000449784 SRCIN1Q9C0H9 1055 aa11.78□□□□□ -0.52
COPS7B-214ENST00000449784 H7C1W4 665 aa11.77□□□□□ -0.53
COPS7B-214ENST00000449784 FBXO45P0C2W1 286 aa11.77□□□□□ -0.53
COPS7B-214ENST00000449784 SLURP2P0DP57 97 aa11.77□□□□□ -0.53
COPS7B-214ENST00000449784 HSP90B1P14625 803 aaKnown RBP11.77□□□□□ -0.53
COPS7B-214ENST00000449784 CASP7P55210 303 aa11.77□□□□□ -0.53
COPS7B-214ENST00000449784 SLC4A10Q6U841 1118 aa11.77□□□□□ -0.53
COPS7B-214ENST00000449784 TTLL6Q8N841 843 aa11.77□□□□□ -0.53
COPS7B-214ENST00000449784 IL27Q8NEV9 243 aa11.77□□□□□ -0.53
COPS7B-214ENST00000449784 CNKSR1Q969H4 720 aa11.77□□□□□ -0.53
COPS7B-214ENST00000449784 WWC3Q9ULE0 1092 aa11.77□□□□□ -0.53
COPS7B-214ENST00000449784 BCS1LQ9Y276 419 aa11.77□□□□□ -0.53
COPS7B-214ENST00000449784 ABCC4O15439 1325 aa11.77□□□□□ -0.53
COPS7B-214ENST00000449784 LAMB2P55268 1798 aa11.77□□□□□ -0.53
COPS7B-214ENST00000449784 IPO8O15397 1037 aaKnown RBP11.76□□□□□ -0.53
COPS7B-214ENST00000449784 TRIM27P14373 513 aa11.76□□□□□ -0.53
COPS7B-214ENST00000449784 IRS1P35568 1242 aa11.76□□□□□ -0.53
COPS7B-214ENST00000449784 SF3B3Q15393 1217 aaKnown RBP11.76□□□□□ -0.53
COPS7B-214ENST00000449784 GPR162Q16538 588 aa11.76□□□□□ -0.53
COPS7B-214ENST00000449784 UBE3BQ7Z3V4 1068 aa11.76□□□□□ -0.53
COPS7B-214ENST00000449784 ZNF622Q969S3 477 aaKnown RBP eCLIP11.76□□□□□ -0.53
COPS7B-214ENST00000449784 PLA2G12BQ9BX93 195 aa11.76□□□□□ -0.53
COPS7B-214ENST00000449784 DDX60Q8IY21 1712 aaKnown RBP11.76□□□□□ -0.53
COPS7B-214ENST00000449784 GPR25O00155 361 aa11.75□□□□□ -0.53
COPS7B-214ENST00000449784 GRM8O00222 908 aa11.75□□□□□ -0.53
COPS7B-214ENST00000449784 GRIN3BO60391 1043 aa11.75□□□□□ -0.53
COPS7B-214ENST00000449784 PDE8AO60658 829 aa11.75□□□□□ -0.53
COPS7B-214ENST00000449784 MARSP56192 900 aaKnown RBP11.75□□□□□ -0.53
COPS7B-214ENST00000449784 TMEM259Q4ZIN3 620 aa11.75□□□□□ -0.53
COPS7B-214ENST00000449784 PRPF40BQ6NWY9 871 aaKnown RBP11.75□□□□□ -0.53
COPS7B-214ENST00000449784 LYPD4Q6UWN0 246 aa11.75□□□□□ -0.53
COPS7B-214ENST00000449784 ATF7IPQ6VMQ6 1270 aa11.75□□□□□ -0.53
COPS7B-214ENST00000449784 RIPOR1Q6ZS17 1223 aa11.75□□□□□ -0.53
COPS7B-214ENST00000449784 JARID2Q92833 1246 aaPredicted RBP11.75□□□□□ -0.53
COPS7B-214ENST00000449784 RPGRQ92834 1020 aaKnown RBP11.75□□□□□ -0.53
COPS7B-214ENST00000449784 CRAMP1Q96RY5 1269 aa11.75□□□□□ -0.53
COPS7B-214ENST00000449784 UTYO14607 1347 aa11.75□□□□□ -0.53
COPS7B-214ENST00000449784 ALDH1B1P30837 517 aa11.74□□□□□ -0.53
COPS7B-214ENST00000449784 CCT4P50991 539 aaKnown RBP11.74□□□□□ -0.53
COPS7B-214ENST00000449784 GAS6Q14393 721 aa11.74□□□□□ -0.53
COPS7B-214ENST00000449784 ZKSCAN2Q63HK3 967 aa11.74□□□□□ -0.53
COPS7B-214ENST00000449784 FRAT1Q92837 279 aaPredicted RBP11.74□□□□□ -0.53
COPS7B-214ENST00000449784 RBM17Q96I25 401 aaKnown RBP11.74□□□□□ -0.53
COPS7B-214ENST00000449784 RCAN3Q9UKA8 241 aa11.74□□□□□ -0.53
COPS7B-214ENST00000449784 ARHGEF15O94989 841 aa11.73□□□□□ -0.53
COPS7B-214ENST00000449784 RNF144AP50876 292 aaPredicted RBP11.73□□□□□ -0.53
COPS7B-214ENST00000449784 CTSWP56202 376 aa11.73□□□□□ -0.53
COPS7B-214ENST00000449784 INTS3Q68E01 1043 aaKnown RBP11.73□□□□□ -0.53
COPS7B-214ENST00000449784 RTL9Q8NET4 1388 aa11.73□□□□□ -0.53
COPS7B-214ENST00000449784 C7orf43Q8WVR3 580 aa11.73□□□□□ -0.53
COPS7B-214ENST00000449784 C9orf78Q9NZ63 289 aaPredicted RBP11.73□□□□□ -0.53
COPS7B-214ENST00000449784 ARFGEF1Q9Y6D6 1849 aa11.73□□□□□ -0.53
COPS7B-214ENST00000449784 SNED1Q8TER0 1413 aa11.72□□□□□ -0.53
COPS7B-214ENST00000449784 A0A1W2PRU2 124 aa11.72□□□□□ -0.53
COPS7B-214ENST00000449784 NBPF7P0C2Y1 421 aaPredicted RBP11.72□□□□□ -0.53
COPS7B-214ENST00000449784 GRAPQ13588 217 aa11.72□□□□□ -0.53
COPS7B-214ENST00000449784 SUZ12Q15022 739 aaKnown RBP11.72□□□□□ -0.53
COPS7B-214ENST00000449784 CCDC152Q4G0S7 254 aa11.72□□□□□ -0.53
COPS7B-214ENST00000449784 DDX46Q7L014 1031 aaKnown RBP11.72□□□□□ -0.53
COPS7B-214ENST00000449784 TTLL11Q8NHH1 800 aa11.72□□□□□ -0.53
COPS7B-214ENST00000449784 GRAPLQ8TC17 118 aaPredicted RBP11.72□□□□□ -0.53
COPS7B-214ENST00000449784 USP44Q9H0E7 712 aa11.72□□□□□ -0.53
COPS7B-214ENST00000449784 TNNQ9UQP3 1299 aa11.72□□□□□ -0.53
COPS7B-214ENST00000449784 CSF1RP07333 972 aa11.71□□□□□ -0.53
COPS7B-214ENST00000449784 MAP3K10Q02779 954 aa11.71□□□□□ -0.53
COPS7B-214ENST00000449784 SOGA3Q5TF21 947 aa11.71□□□□□ -0.53
COPS7B-214ENST00000449784 ZNF837Q96EG3 531 aaPredicted RBP11.71□□□□□ -0.53
COPS7B-214ENST00000449784 GAS2L1Q99501 681 aaPredicted RBP11.71□□□□□ -0.53
COPS7B-214ENST00000449784 SLX4Q8IY92 1834 aa11.71□□□□□ -0.54
COPS7B-214ENST00000449784 C21orf2O43822 256 aa11.7□□□□□ -0.54
COPS7B-214ENST00000449784 BBOX1O75936 387 aa11.7□□□□□ -0.54
COPS7B-214ENST00000449784 FOXO4P98177 505 aa11.7□□□□□ -0.54
COPS7B-214ENST00000449784 POU4F2Q12837 409 aa11.7□□□□□ -0.54
COPS7B-214ENST00000449784 EPHA10Q5JZY3 1008 aa11.7□□□□□ -0.54
COPS7B-214ENST00000449784 CC2D2BQ6DHV5 1058 aa11.7□□□□□ -0.54
COPS7B-214ENST00000449784 TMC4Q7Z404 712 aa11.7□□□□□ -0.54
COPS7B-214ENST00000449784 DZIP1LQ8IYY4 767 aaKnown RBP11.7□□□□□ -0.54
COPS7B-214ENST00000449784 CELF1Q92879 486 aaKnown RBP11.7□□□□□ -0.54
COPS7B-214ENST00000449784 CLUAP1Q96AJ1 413 aa11.7□□□□□ -0.54
COPS7B-214ENST00000449784 KAZALD1Q96I82 304 aa11.7□□□□□ -0.54
COPS7B-214ENST00000449784 SUCLG2Q96I99 432 aa11.7□□□□□ -0.54
COPS7B-214ENST00000449784 GREM2Q9H772 168 aa11.7□□□□□ -0.54
COPS7B-214ENST00000449784 SEC31BQ9NQW1 1179 aa11.7□□□□□ -0.54
COPS7B-214ENST00000449784 COL4A1P02462 1669 aa11.69□□□□□ -0.54
COPS7B-214ENST00000449784 LTBP3Q9NS15 1303 aa11.69□□□□□ -0.54
COPS7B-214ENST00000449784 NFKBIEO00221 500 aa11.69□□□□□ -0.54
COPS7B-214ENST00000449784 SCTRP47872 440 aa11.69□□□□□ -0.54
COPS7B-214ENST00000449784 SRSF11Q05519 484 aaKnown RBP11.69□□□□□ -0.54
COPS7B-214ENST00000449784 RABL6Q3YEC7 729 aaPredicted RBP11.69□□□□□ -0.54
COPS7B-214ENST00000449784 CCDC93Q567U6 631 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms