RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 TCEAL1Q15170 157 aa4.35□□□□□ -1.71
HMGB3P8-201ENST00000449709 UVSSAQ2YD98 709 aa4.35□□□□□ -1.71
HMGB3P8-201ENST00000449709 SAMD5Q5TGI4 173 aa4.35□□□□□ -1.71
HMGB3P8-201ENST00000449709 SUGP1Q8IWZ8 645 aaKnown RBP4.35□□□□□ -1.71
HMGB3P8-201ENST00000449709 NEDD1Q8NHV4 660 aa4.35□□□□□ -1.71
HMGB3P8-201ENST00000449709 ZNF296Q8WUU4 475 aaPredicted RBP4.35□□□□□ -1.71
HMGB3P8-201ENST00000449709 MRFAP1L1Q96HT8 127 aa4.35□□□□□ -1.71
HMGB3P8-201ENST00000449709 SPACA7Q96KW9 195 aa4.35□□□□□ -1.71
HMGB3P8-201ENST00000449709 NT5C1AQ9BXI3 368 aa4.35□□□□□ -1.71
HMGB3P8-201ENST00000449709 ZCCHC2Q9C0B9 1178 aaKnown RBP4.35□□□□□ -1.71
HMGB3P8-201ENST00000449709 CRISPLD1Q9H336 500 aa4.35□□□□□ -1.71
HMGB3P8-201ENST00000449709 ZNF408Q9H9D4 720 aa4.35□□□□□ -1.71
HMGB3P8-201ENST00000449709 ABCB6Q9NP58 842 aa4.35□□□□□ -1.71
HMGB3P8-201ENST00000449709 BRD7Q9NPI1 651 aa4.35□□□□□ -1.71
HMGB3P8-201ENST00000449709 LATS2Q9NRM7 1088 aa4.35□□□□□ -1.71
HMGB3P8-201ENST00000449709 GINM1Q9NU53 330 aa4.35□□□□□ -1.71
HMGB3P8-201ENST00000449709 CHMP5Q9NZZ3 219 aa4.35□□□□□ -1.71
HMGB3P8-201ENST00000449709 CTNNA3Q9UI47 895 aa4.35□□□□□ -1.71
HMGB3P8-201ENST00000449709 PPM1HQ9ULR3 514 aa4.35□□□□□ -1.71
HMGB3P8-201ENST00000449709 PAXBP1Q9Y5B6 917 aa4.35□□□□□ -1.71
HMGB3P8-201ENST00000449709 CCDC7Q96M83 1385 aa4.35□□□□□ -1.71
HMGB3P8-201ENST00000449709 HECW1Q76N89 1606 aa4.35□□□□□ -1.71
HMGB3P8-201ENST00000449709 PLEKHD1A6NEE1 506 aa4.34□□□□□ -1.71
HMGB3P8-201ENST00000449709 F6X3S4 739 aa4.34□□□□□ -1.71
HMGB3P8-201ENST00000449709 K7ELQ4 463 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P8-201ENST00000449709 GREM1O60565 184 aa4.34□□□□□ -1.71
HMGB3P8-201ENST00000449709 ZNF853P0CG23 659 aa4.34□□□□□ -1.71
HMGB3P8-201ENST00000449709 RLBP1P12271 317 aa4.34□□□□□ -1.71
HMGB3P8-201ENST00000449709 GARTP22102 1010 aa4.34□□□□□ -1.71
HMGB3P8-201ENST00000449709 GBP2P32456 591 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P8-201ENST00000449709 ETFBP38117 255 aa4.34□□□□□ -1.71
HMGB3P8-201ENST00000449709 OS9Q13438 667 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P8-201ENST00000449709 MLECQ14165 292 aa4.34□□□□□ -1.71
HMGB3P8-201ENST00000449709 FBXL19Q6PCT2 694 aa4.34□□□□□ -1.71
HMGB3P8-201ENST00000449709 EP400NLQ6ZTU2 488 aa4.34□□□□□ -1.71
HMGB3P8-201ENST00000449709 SV2BQ7L1I2 683 aa4.34□□□□□ -1.71
HMGB3P8-201ENST00000449709 ZNF771Q7L3S4 317 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P8-201ENST00000449709 NLRP8Q86W28 1048 aa4.34□□□□□ -1.71
HMGB3P8-201ENST00000449709 OR13H1Q8NG92 308 aa4.34□□□□□ -1.71
HMGB3P8-201ENST00000449709 TBC1D22AQ8WUA7 517 aa4.34□□□□□ -1.71
HMGB3P8-201ENST00000449709 RHOVQ96L33 236 aa4.34□□□□□ -1.71
HMGB3P8-201ENST00000449709 TACO1Q9BSH4 297 aaKnown RBP4.34□□□□□ -1.71
HMGB3P8-201ENST00000449709 TEX13AQ9BXU3 409 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P8-201ENST00000449709 OXCT2Q9BYC2 517 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P8-201ENST00000449709 KANSL3Q9P2N6 904 aa4.34□□□□□ -1.71
HMGB3P8-201ENST00000449709 STRIP2Q9ULQ0 834 aa4.34□□□□□ -1.71
HMGB3P8-201ENST00000449709 EFR3BQ9Y2G0 817 aa4.34□□□□□ -1.71
HMGB3P8-201ENST00000449709 KNSTRNQ9Y448 316 aa4.34□□□□□ -1.71
HMGB3P8-201ENST00000449709 MRPL42Q9Y6G3 142 aaKnown RBP4.34□□□□□ -1.71
HMGB3P8-201ENST00000449709 GJA3Q9Y6H8 435 aa4.34□□□□□ -1.71
HMGB3P8-201ENST00000449709 RAD54L2Q9Y4B4 1467 aa4.34□□□□□ -1.71
HMGB3P8-201ENST00000449709 SCAF11Q99590 1463 aaKnown RBP4.33□□□□□ -1.72
HMGB3P8-201ENST00000449709 BLMP54132 1417 aaPredicted RBP4.33□□□□□ -1.72
HMGB3P8-201ENST00000449709 EIF3AQ14152 1382 aaKnown RBP4.33□□□□□ -1.72
HMGB3P8-201ENST00000449709 CCDC196A0A1B0GTZ2 297 aa4.33□□□□□ -1.72
HMGB3P8-201ENST00000449709 PHF20L1A8MW92 1017 aa4.33□□□□□ -1.72
HMGB3P8-201ENST00000449709 CTAGE5O15320 804 aa4.33□□□□□ -1.72
HMGB3P8-201ENST00000449709 KLF4O43474 513 aa4.33□□□□□ -1.72
HMGB3P8-201ENST00000449709 NRDCO43847 1150 aa4.33□□□□□ -1.72
HMGB3P8-201ENST00000449709 MMP20O60882 483 aa4.33□□□□□ -1.72
HMGB3P8-201ENST00000449709 SASH3O75995 380 aa4.33□□□□□ -1.72
HMGB3P8-201ENST00000449709 IGHA1P01876 353 aa4.33□□□□□ -1.72
HMGB3P8-201ENST00000449709 ITGB2P05107 769 aa4.33□□□□□ -1.72
HMGB3P8-201ENST00000449709 HSD3B2P26439 372 aa4.33□□□□□ -1.72
HMGB3P8-201ENST00000449709 TARSP26639 723 aaKnown RBP4.33□□□□□ -1.72
HMGB3P8-201ENST00000449709 CASQ1P31415 396 aa4.33□□□□□ -1.72
HMGB3P8-201ENST00000449709 GTF2A1P52655 376 aaPredicted RBP4.33□□□□□ -1.72
HMGB3P8-201ENST00000449709 CHAF1AQ13111 956 aaPredicted RBP4.33□□□□□ -1.72
HMGB3P8-201ENST00000449709 COL9A2Q14055 689 aaPredicted RBP4.33□□□□□ -1.72
HMGB3P8-201ENST00000449709 PLA2G4EQ3MJ16 856 aa4.33□□□□□ -1.72
HMGB3P8-201ENST00000449709 C1QTNF12Q5T7M4 302 aa4.33□□□□□ -1.72
HMGB3P8-201ENST00000449709 ANKS3Q6ZW76 656 aa4.33□□□□□ -1.72
HMGB3P8-201ENST00000449709 IQUBQ8NA54 791 aa4.33□□□□□ -1.72
HMGB3P8-201ENST00000449709 PHC3Q8NDX5 983 aa4.33□□□□□ -1.72
HMGB3P8-201ENST00000449709 PIBF1Q8WXW3 757 aa4.33□□□□□ -1.72
HMGB3P8-201ENST00000449709 DCAF5Q96JK2 942 aa4.33□□□□□ -1.72
HMGB3P8-201ENST00000449709 TBC1D32Q96NH3 1257 aa4.33□□□□□ -1.72
HMGB3P8-201ENST00000449709 TSPAN18Q96SJ8 248 aa4.33□□□□□ -1.72
HMGB3P8-201ENST00000449709 TCF12Q99081 682 aa4.33□□□□□ -1.72
HMGB3P8-201ENST00000449709 GSX2Q9BZM3 304 aa4.33□□□□□ -1.72
HMGB3P8-201ENST00000449709 RUBCNLQ9H714 662 aa4.33□□□□□ -1.72
HMGB3P8-201ENST00000449709 LIN7BQ9HAP6 207 aa4.33□□□□□ -1.72
HMGB3P8-201ENST00000449709 SIRPGQ9P1W8 387 aa4.33□□□□□ -1.72
HMGB3P8-201ENST00000449709 AKAP2Q9Y2D5 859 aa4.33□□□□□ -1.72
HMGB3P8-201ENST00000449709 RPS6KL1Q9Y6S9 549 aa4.33□□□□□ -1.72
HMGB3P8-201ENST00000449709 PLXNC1O60486 1568 aa4.32□□□□□ -1.72
HMGB3P8-201ENST00000449709 TIAM1Q13009 1591 aa4.32□□□□□ -1.72
HMGB3P8-201ENST00000449709 THOC2Q8NI27 1593 aaKnown RBP4.32□□□□□ -1.72
HMGB3P8-201ENST00000449709 OIP5O43482 229 aa4.32□□□□□ -1.72
HMGB3P8-201ENST00000449709 CPP00450 1065 aa4.32□□□□□ -1.72
HMGB3P8-201ENST00000449709 PF4P02776 101 aa4.32□□□□□ -1.72
HMGB3P8-201ENST00000449709 CD151P48509 253 aa4.32□□□□□ -1.72
HMGB3P8-201ENST00000449709 LIG3P49916 1009 aa4.32□□□□□ -1.72
HMGB3P8-201ENST00000449709 CCINQ13939 588 aa4.32□□□□□ -1.72
HMGB3P8-201ENST00000449709 RAB33AQ14088 237 aa4.32□□□□□ -1.72
HMGB3P8-201ENST00000449709 UBAP2LQ14157 1087 aaKnown RBP4.32□□□□□ -1.72
HMGB3P8-201ENST00000449709 MAP3K11Q16584 847 aa4.32□□□□□ -1.72
HMGB3P8-201ENST00000449709 DTHD1Q6ZMT9 781 aa4.32□□□□□ -1.72
HMGB3P8-201ENST00000449709 C1orf229Q6ZS94 237 aaPredicted RBP4.32□□□□□ -1.72
HMGB3P8-201ENST00000449709 PODNQ7Z5L7 613 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms