RNA–Protein interactions for RNA: ENST00000449489.5

RBM39-218, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-218ENST00000449489 DUSP27Q5VZP5 1158 aa9.41□□□□□ -0.9
RBM39-218ENST00000449489 FAM109BQ6ICB4 259 aaPredicted RBP9.41□□□□□ -0.9
RBM39-218ENST00000449489 ANKRD23Q86SG2 305 aa9.41□□□□□ -0.9
RBM39-218ENST00000449489 PXYLP1Q8TE99 480 aa9.41□□□□□ -0.9
RBM39-218ENST00000449489 PLA2G12BQ9BX93 195 aa9.41□□□□□ -0.9
RBM39-218ENST00000449489 PHAXQ9H814 394 aaKnown RBP9.41□□□□□ -0.9
RBM39-218ENST00000449489 ZNF70Q9UC06 446 aaPredicted RBP9.41□□□□□ -0.9
RBM39-218ENST00000449489 PCDHGA10Q9Y5H3 936 aa9.41□□□□□ -0.9
RBM39-218ENST00000449489 SNCAIPQ9Y6H5 919 aa9.41□□□□□ -0.9
RBM39-218ENST00000449489 MGAMO43451 1857 aa9.4□□□□□ -0.9
RBM39-218ENST00000449489 ARAP2Q8WZ64 1704 aa9.4□□□□□ -0.9
RBM39-218ENST00000449489 AOX1Q06278 1338 aa9.4□□□□□ -0.9
RBM39-218ENST00000449489 FAM205AQ6ZU69 1335 aa9.4□□□□□ -0.9
RBM39-218ENST00000449489 DOCK3Q8IZD9 2030 aa9.4□□□□□ -0.9
RBM39-218ENST00000449489 PPATQ06203 517 aa9.4□□□□□ -0.9
RBM39-218ENST00000449489 IRF5Q13568 498 aa9.4□□□□□ -0.9
RBM39-218ENST00000449489 Q7L0L9 218 aa9.4□□□□□ -0.9
RBM39-218ENST00000449489 ZNF804AQ7Z570 1209 aa9.4□□□□□ -0.9
RBM39-218ENST00000449489 TDHQ8IZJ6 230 aa9.4□□□□□ -0.9
RBM39-218ENST00000449489 ANKLE1Q8NAG6 615 aa9.4□□□□□ -0.9
RBM39-218ENST00000449489 HOOK2Q96ED9 719 aa9.4□□□□□ -0.9
RBM39-218ENST00000449489 MPHOSPH8Q99549 860 aa9.4□□□□□ -0.9
RBM39-218ENST00000449489 UNC93B1Q9H1C4 597 aa9.4□□□□□ -0.9
RBM39-218ENST00000449489 PAK6Q9NQU5 681 aaPredicted RBP9.4□□□□□ -0.9
RBM39-218ENST00000449489 BIN2Q9UBW5 565 aaPredicted RBP9.4□□□□□ -0.9
RBM39-218ENST00000449489 H7C1W4 665 aa9.39□□□□□ -0.91
RBM39-218ENST00000449489 TFRCP02786 760 aaKnown RBP9.39□□□□□ -0.91
RBM39-218ENST00000449489 IGKV5-2P06315 115 aa9.39□□□□□ -0.91
RBM39-218ENST00000449489 CSF1RP07333 972 aa9.39□□□□□ -0.91
RBM39-218ENST00000449489 BCRP11274 1271 aa9.39□□□□□ -0.91
RBM39-218ENST00000449489 KCNJ4P48050 445 aa9.39□□□□□ -0.91
RBM39-218ENST00000449489 BCAMP50895 628 aa9.39□□□□□ -0.91
RBM39-218ENST00000449489 RBM5P52756 815 aaKnown RBP eCLIP9.39□□□□□ -0.91
RBM39-218ENST00000449489 FOSBP53539 338 aa9.39□□□□□ -0.91
RBM39-218ENST00000449489 FCGRTP55899 365 aa9.39□□□□□ -0.91
RBM39-218ENST00000449489 CHRNDQ07001 517 aa9.39□□□□□ -0.91
RBM39-218ENST00000449489 PDE4DQ08499 809 aa9.39□□□□□ -0.91
RBM39-218ENST00000449489 FKBP1CQ5VVH2 108 aa9.39□□□□□ -0.91
RBM39-218ENST00000449489 NECAB2Q7Z6G3 386 aa9.39□□□□□ -0.91
RBM39-218ENST00000449489 JARID2Q92833 1246 aaPredicted RBP9.39□□□□□ -0.91
RBM39-218ENST00000449489 ZDHHC16Q969W1 377 aa9.39□□□□□ -0.91
RBM39-218ENST00000449489 PCGF6Q9BYE7 350 aa9.39□□□□□ -0.91
RBM39-218ENST00000449489 CPA4Q9UI42 421 aa9.39□□□□□ -0.91
RBM39-218ENST00000449489 KCNH4Q9UQ05 1017 aa9.39□□□□□ -0.91
RBM39-218ENST00000449489 RPTORQ8N122 1335 aa9.38□□□□□ -0.91
RBM39-218ENST00000449489 F8W031 263 aaPredicted RBP9.38□□□□□ -0.91
RBM39-218ENST00000449489 PDHXO00330 501 aa9.38□□□□□ -0.91
RBM39-218ENST00000449489 HOXB3P14651 431 aaPredicted RBP9.38□□□□□ -0.91
RBM39-218ENST00000449489 ITGA6P23229 1130 aa9.38□□□□□ -0.91
RBM39-218ENST00000449489 HDLBPQ00341 1268 aaKnown RBP9.38□□□□□ -0.91
RBM39-218ENST00000449489 PRKCZQ05513 592 aa9.38□□□□□ -0.91
RBM39-218ENST00000449489 KSR2Q6VAB6 950 aa9.38□□□□□ -0.91
RBM39-218ENST00000449489 FAM83AQ86UY5 434 aa9.38□□□□□ -0.91
RBM39-218ENST00000449489 DZIP1LQ8IYY4 767 aaKnown RBP9.38□□□□□ -0.91
RBM39-218ENST00000449489 PAWRQ96IZ0 340 aaKnown RBP9.38□□□□□ -0.91
RBM39-218ENST00000449489 MRIQ9BWK5 157 aa9.38□□□□□ -0.91
RBM39-218ENST00000449489 TMEM39BQ9GZU3 492 aa9.38□□□□□ -0.91
RBM39-218ENST00000449489 TDRD3Q9H7E2 651 aaKnown RBP9.38□□□□□ -0.91
RBM39-218ENST00000449489 GTF3C3Q9Y5Q9 886 aa9.38□□□□□ -0.91
RBM39-218ENST00000449489 ADCY3O60266 1144 aa9.37□□□□□ -0.91
RBM39-218ENST00000449489 NUDT7P0C024 238 aa9.37□□□□□ -0.91
RBM39-218ENST00000449489 ZNF853P0CG23 659 aa9.37□□□□□ -0.91
RBM39-218ENST00000449489 NEXNQ0ZGT2 675 aa9.37□□□□□ -0.91
RBM39-218ENST00000449489 MOGSQ13724 837 aa9.37□□□□□ -0.91
RBM39-218ENST00000449489 AMHR2Q16671 573 aa9.37□□□□□ -0.91
RBM39-218ENST00000449489 ZNF454Q8N9F8 522 aa9.37□□□□□ -0.91
RBM39-218ENST00000449489 DEFB118Q96PH6 123 aa9.37□□□□□ -0.91
RBM39-218ENST00000449489 WRNIP1Q96S55 665 aa9.37□□□□□ -0.91
RBM39-218ENST00000449489 PARK7Q99497 189 aaKnown RBP9.37□□□□□ -0.91
RBM39-218ENST00000449489 LAS1LQ9Y4W2 734 aaKnown RBP9.37□□□□□ -0.91
RBM39-218ENST00000449489 POTEB3A0JP26 581 aa9.36□□□□□ -0.91
RBM39-218ENST00000449489 NEURL1BA8MQ27 555 aa9.36□□□□□ -0.91
RBM39-218ENST00000449489 INHAP05111 366 aa9.36□□□□□ -0.91
RBM39-218ENST00000449489 HOXB1P14653 301 aaPredicted RBP9.36□□□□□ -0.91
RBM39-218ENST00000449489 MAGEA10P43363 369 aaPredicted RBP9.36□□□□□ -0.91
RBM39-218ENST00000449489 ARSIQ5FYB1 569 aa9.36□□□□□ -0.91
RBM39-218ENST00000449489 DCAF15Q66K64 600 aa9.36□□□□□ -0.91
RBM39-218ENST00000449489 POTEBQ6S5H4 581 aa9.36□□□□□ -0.91
RBM39-218ENST00000449489 TDRD7Q8NHU6 1098 aaKnown RBP9.36□□□□□ -0.91
RBM39-218ENST00000449489 ZKSCAN4Q969J2 545 aaPredicted RBP9.36□□□□□ -0.91
RBM39-218ENST00000449489 TTF2Q9UNY4 1162 aaKnown RBP9.36□□□□□ -0.91
RBM39-218ENST00000449489 MAP3K2Q9Y2U5 619 aa9.36□□□□□ -0.91
RBM39-218ENST00000449489 RPAP1Q9BWH6 1393 aaPredicted RBP9.36□□□□□ -0.91
RBM39-218ENST00000449489 COL2A1P02458 1487 aaPredicted RBP9.35□□□□□ -0.91
RBM39-218ENST00000449489 A0A1B0GUL6 1792 aa9.35□□□□□ -0.91
RBM39-218ENST00000449489 PI4KAP2A4QPH2 592 aa9.35□□□□□ -0.91
RBM39-218ENST00000449489 TCP10L2B9ZVM9 353 aa9.35□□□□□ -0.91
RBM39-218ENST00000449489 CXCL11O14625 94 aa9.35□□□□□ -0.91
RBM39-218ENST00000449489 CRKP46108 304 aa9.35□□□□□ -0.91
RBM39-218ENST00000449489 FLT3LGP49771 235 aa9.35□□□□□ -0.91
RBM39-218ENST00000449489 CASP7P55210 303 aa9.35□□□□□ -0.91
RBM39-218ENST00000449489 PPP4R3BQ5MIZ7 849 aa9.35□□□□□ -0.91
RBM39-218ENST00000449489 MFSD14BQ5SR56 506 aa9.35□□□□□ -0.91
RBM39-218ENST00000449489 CCDC30Q5VVM6 783 aa9.35□□□□□ -0.91
RBM39-218ENST00000449489 PI4KAP1Q8N8J0 262 aa9.35□□□□□ -0.91
RBM39-218ENST00000449489 SYMPKQ92797 1274 aaKnown RBP9.35□□□□□ -0.91
RBM39-218ENST00000449489 GUCD1Q96NT3 240 aa9.35□□□□□ -0.91
RBM39-218ENST00000449489 ZNF341Q9BYN7 854 aa9.35□□□□□ -0.91
RBM39-218ENST00000449489 NBPF3Q9H094 633 aa9.35□□□□□ -0.91
RBM39-218ENST00000449489 KDM4CQ9H3R0 1056 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms